Package tech.molecules.leet.table.chart

Class ScatterPlotModel

java.lang.Object

tech.molecules.leet.table.chart.ScatterPlotModel

public class ScatterPlotModel
extends Object

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static class	ScatterPlotModel.NumericalDatasourceKeyedDataset<U>
static interface	ScatterPlotModel.ScatterPlotListener
class	ScatterPlotModel.SetClusteringAnnotationsAction
static class	ScatterPlotModel.SetColorNumericalDatasource
static class	ScatterPlotModel.SetPointSizeAction

Constructor Summary

Constructors

Constructor	Description
ScatterPlotModel(NexusTableModel ntm, org.jfree.data.general.KeyedValuesDataset x, org.jfree.data.general.KeyedValuesDataset y)
ScatterPlotModel(NexusTableModel ntm, NumericalDatasource nd_x, NumericalDatasource nd_y)

Method Summary

Modifier and Type	Method	Description
void	addScatterPlotListener(JFreeChartScatterPlot.ScatterPlotListener li)
org.jfree.chart.JFreeChart	getChart()
Map<String,Double>	getHighlightMap(Collection<String> highlight)
Map<String,Double>	getHighlightMap(org.jfree.chart.entity.EntityCollection entityCollection, org.jfree.chart.entity.EntityCollection toHighlight)
int	getHighlightNNearestNeighbors()
int	getIndexForKey(String key)
String	getKeyForIndex(int i)
String	getKeyForXYEntity(org.jfree.chart.entity.XYItemEntity entity)
NexusTableModel	getNexusTableModel()
static org.jfree.chart.entity.EntityCollection	getNNearestEntities(org.jfree.chart.entity.EntityCollection entityCollection, int px, int py, int n)
org.jfree.chart.plot.XYPlot	getXYPlot()
org.jfree.chart.renderer.xy.XYShapeRenderer	getXYShapeRenderer()
static double[]	java2dToChart(org.jfree.chart.ChartPanel cp, org.jfree.chart.plot.XYPlot plot, double px, double py)
void	reinitPlot()
void	removeScatterPlotListener(JFreeChartScatterPlot.ScatterPlotListener li)
void	setColor(org.jfree.data.general.DefaultKeyedValuesDataset data_color)
void	setColorExpclicit(org.jfree.chart.renderer.PaintScale colors, Map<String,Integer> values)
void	setColormap(net.mahdilamb.colormap.Colormap colormap)
void	setColorValues(Map<String,Double> col)
void	setColorValues(NumericalDatasource nds)
void	setHighlight(Set<String> highlight, boolean fireEvent)
void	setHighlightNNearestNeighbors(int n)	set to -1 to deactivate
boolean	setMouseOverClass(NexusTableModel.SelectionType st)
void	setMultipleAnnotations(Map<String,List<Integer>> classes, Map<Integer,Paint> paints)
void	setRendererShapeSize(int size)
void	setSelection(Set<String> selection)	Note: calling this method does NOT fire any events in ClusterAppModel
void	setWithoutAxisAndLegend()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ScatterPlotModel

public ScatterPlotModel(NexusTableModel ntm,
                        org.jfree.data.general.KeyedValuesDataset x,
                        org.jfree.data.general.KeyedValuesDataset y)

ScatterPlotModel

public ScatterPlotModel(NexusTableModel ntm,
                        NumericalDatasource nd_x,
                        NumericalDatasource nd_y)

Method Detail

setMouseOverClass

public boolean setMouseOverClass(NexusTableModel.SelectionType st)

setColor

public void setColor(org.jfree.data.general.DefaultKeyedValuesDataset data_color)

setColorExpclicit

public void setColorExpclicit(org.jfree.chart.renderer.PaintScale colors,
                              Map<String,Integer> values)

setColorValues

public void setColorValues(Map<String,Double> col)

setColorValues

public void setColorValues(NumericalDatasource nds)

getNexusTableModel

public NexusTableModel getNexusTableModel()

setColormap

public void setColormap(net.mahdilamb.colormap.Colormap colormap)

getKeyForXYEntity

public String getKeyForXYEntity(org.jfree.chart.entity.XYItemEntity entity)

setHighlightNNearestNeighbors

public void setHighlightNNearestNeighbors(int n)

set to -1 to deactivate

Parameters:

n -

setSelection

public void setSelection(Set<String> selection)

Note: calling this method does NOT fire any events in ClusterAppModel

Parameters:

selection -

setHighlight

public void setHighlight(Set<String> highlight,
                         boolean fireEvent)

java2dToChart

public static double[] java2dToChart(org.jfree.chart.ChartPanel cp,
                                     org.jfree.chart.plot.XYPlot plot,
                                     double px,
                                     double py)

getHighlightMap

public Map<String,Double> getHighlightMap(Collection<String> highlight)

getHighlightMap

public Map<String,Double> getHighlightMap(org.jfree.chart.entity.EntityCollection entityCollection,
                                                org.jfree.chart.entity.EntityCollection toHighlight)

getNNearestEntities

public static org.jfree.chart.entity.EntityCollection getNNearestEntities(org.jfree.chart.entity.EntityCollection entityCollection,
                                                                          int px,
                                                                          int py,
                                                                          int n)

getHighlightNNearestNeighbors

public int getHighlightNNearestNeighbors()

addScatterPlotListener

public void addScatterPlotListener(JFreeChartScatterPlot.ScatterPlotListener li)

removeScatterPlotListener

public void removeScatterPlotListener(JFreeChartScatterPlot.ScatterPlotListener li)

getKeyForIndex

public String getKeyForIndex(int i)

getIndexForKey

public int getIndexForKey(String key)

getChart

public org.jfree.chart.JFreeChart getChart()

getXYPlot

public org.jfree.chart.plot.XYPlot getXYPlot()

reinitPlot

public void reinitPlot()

getXYShapeRenderer

public org.jfree.chart.renderer.xy.XYShapeRenderer getXYShapeRenderer()

setRendererShapeSize

public void setRendererShapeSize(int size)

setMultipleAnnotations

public void setMultipleAnnotations(Map<String,List<Integer>> classes,
                                   Map<Integer,Paint> paints)

Parameters:

classes -

paints -

setWithoutAxisAndLegend

public void setWithoutAxisAndLegend()