A C D E F G H I N O P R S T U V W

A

AbstractTable - Class in de.sekmi.histream.export.config

AbstractTable() - Constructor for class de.sekmi.histream.export.config.AbstractTable

allConcepts() - Method in class de.sekmi.histream.export.config.ExportDescriptor

Get all concepts used for the export.

C

close() - Method in class de.sekmi.histream.export.csv.CSVWriter

close() - Method in interface de.sekmi.histream.export.ExportWriter

close() - Method in class de.sekmi.histream.export.NoOpStreamWriter

close() - Method in class de.sekmi.histream.export.TableParser

close() - Method in interface de.sekmi.histream.export.TableWriter

Column - Class in de.sekmi.histream.export.config

Column(String, String) - Constructor for class de.sekmi.histream.export.config.Column

Column() - Constructor for class de.sekmi.histream.export.config.Column

Concept - Class in de.sekmi.histream.export.config

Concept() - Constructor for class de.sekmi.histream.export.config.Concept

ConceptGroup - Class in de.sekmi.histream.export.config

Group containing concepts.

ConceptGroup(String) - Constructor for class de.sekmi.histream.export.config.ConceptGroup

ConceptGroup() - Constructor for class de.sekmi.histream.export.config.ConceptGroup

Concepts - Class in de.sekmi.histream.export.config

Concepts() - Constructor for class de.sekmi.histream.export.config.Concepts

createParser(TableWriter, XPath) - Method in class de.sekmi.histream.export.config.AbstractTable

createParser(TableWriter, XPath) - Method in class de.sekmi.histream.export.config.EavTable

CSVWriter - Class in de.sekmi.histream.export.csv

Write CSV files to a specified directory.

CSVWriter(Path, char, String) - Constructor for class de.sekmi.histream.export.csv.CSVWriter

Create a CSV writer which creates table files in the specified directory.

D

de.sekmi.histream.export - package de.sekmi.histream.export

Encounter/visit based table export functionality for HIStream.

de.sekmi.histream.export.config - package de.sekmi.histream.export.config

Export configuration with JAXB annotations

de.sekmi.histream.export.csv - package de.sekmi.histream.export.csv

E

EavTable - Class in de.sekmi.histream.export.config

EavTable() - Constructor for class de.sekmi.histream.export.config.EavTable

EavTableParser - Class in de.sekmi.histream.export

EavTableParser(EavTable, TableWriter, XPath) - Constructor for class de.sekmi.histream.export.EavTableParser

escapeData(String) - Method in class de.sekmi.histream.export.csv.CSVWriter

Escape data before it is written to the output file.

export(ObservationSupplier, ExportWriter) - Method in class de.sekmi.histream.export.TableExport

Export all observations by the given supplier to the specified ExportWriter.

ExportDescriptor - Class in de.sekmi.histream.export.config

Export descriptor.

ExportDescriptor() - Constructor for class de.sekmi.histream.export.config.ExportDescriptor

ExportException - Exception in de.sekmi.histream.export.config

ExportException(String, Throwable) - Constructor for exception de.sekmi.histream.export.config.ExportException

ExportException(String) - Constructor for exception de.sekmi.histream.export.config.ExportException

ExportSummary - Class in de.sekmi.histream.export

ExportWriter - Interface in de.sekmi.histream.export

Write table data.

F

fileNameForTable(String) - Method in class de.sekmi.histream.export.csv.CSVWriter

flush() - Method in class de.sekmi.histream.export.NoOpStreamWriter

G

get() - Method in class de.sekmi.histream.export.VisitFragmentSupplier

getCharset() - Method in class de.sekmi.histream.export.csv.CSVWriter

getClazz() - Method in class de.sekmi.histream.export.config.ConceptGroup

Get the class (id) attribute for this group.

getColumn(int) - Method in class de.sekmi.histream.export.config.AbstractTable

getColumns() - Method in class de.sekmi.histream.export.config.AbstractTable

getConcepts() - Method in class de.sekmi.histream.export.config.ConceptGroup

Get the concepts in this group

getConcepts() - Method in class de.sekmi.histream.export.config.ExportDescriptor

Get the Concepts object which contains concept groups and ungrouped concepts.

getDirectory() - Method in class de.sekmi.histream.export.csv.CSVWriter

getEAVTables() - Method in class de.sekmi.histream.export.config.ExportDescriptor

getFieldSeparator() - Method in class de.sekmi.histream.export.csv.CSVWriter

getFileExtension() - Method in class de.sekmi.histream.export.csv.CSVWriter

getGroups() - Method in class de.sekmi.histream.export.config.Concepts

getHeader() - Method in class de.sekmi.histream.export.config.Column

getHeaders() - Method in class de.sekmi.histream.export.config.AbstractTable

getId() - Method in class de.sekmi.histream.export.config.AbstractTable

getId() - Method in class de.sekmi.histream.export.config.EavTable

getId() - Method in class de.sekmi.histream.export.config.PatientTable

getId() - Method in class de.sekmi.histream.export.config.VisitTable

getIRI() - Method in class de.sekmi.histream.export.config.Concept

getNamespaceContext() - Method in class de.sekmi.histream.export.NoOpStreamWriter

getNotation() - Method in class de.sekmi.histream.export.config.Concept

getObservationCount() - Method in class de.sekmi.histream.export.ExportSummary

getPatientCount() - Method in class de.sekmi.histream.export.ExportSummary

getPatientCount() - Method in class de.sekmi.histream.export.TableExport

getPatientTable() - Method in class de.sekmi.histream.export.config.ExportDescriptor

getPatientTableName() - Method in class de.sekmi.histream.export.csv.CSVWriter

getPrefix(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

getProperty(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

getRowCount() - Method in class de.sekmi.histream.export.TableParser

Get the number of processed data rows (excluding header rows if applicable).

getTable() - Method in class de.sekmi.histream.export.TableParser

getVisitCount() - Method in class de.sekmi.histream.export.ExportSummary

getVisitCount() - Method in class de.sekmi.histream.export.TableExport

getVisitTable() - Method in class de.sekmi.histream.export.config.ExportDescriptor

getVisitTableName() - Method in class de.sekmi.histream.export.csv.CSVWriter

getWildcardNotation() - Method in class de.sekmi.histream.export.config.Concept

getXPath() - Method in class de.sekmi.histream.export.config.Column

getXPath() - Method in class de.sekmi.histream.export.config.EavTable

H

header(String[]) - Method in interface de.sekmi.histream.export.TableWriter

I

INSTANCE - Static variable in class de.sekmi.histream.export.NoOpStreamWriter

N

newExport() - Method in class de.sekmi.histream.export.config.ExportDescriptor

newIRI(String) - Static method in class de.sekmi.histream.export.config.Concept

newNotation(String) - Static method in class de.sekmi.histream.export.config.Concept

newWildcard(String) - Static method in class de.sekmi.histream.export.config.Concept

NoOpStreamWriter - Class in de.sekmi.histream.export

NoOpStreamWriter() - Constructor for class de.sekmi.histream.export.NoOpStreamWriter

O

openEAVTable(String) - Method in class de.sekmi.histream.export.csv.CSVWriter

openEAVTable(String) - Method in interface de.sekmi.histream.export.ExportWriter

openPatientTable() - Method in class de.sekmi.histream.export.csv.CSVWriter

openPatientTable() - Method in interface de.sekmi.histream.export.ExportWriter

openVisitTable() - Method in class de.sekmi.histream.export.csv.CSVWriter

openVisitTable() - Method in interface de.sekmi.histream.export.ExportWriter

P

parse(Source) - Static method in class de.sekmi.histream.export.config.ExportDescriptor

Parse an XML document containing the export descriptor data.

parse(InputStream) - Static method in class de.sekmi.histream.export.config.ExportDescriptor

Parse an XML document containing the export descriptor data.

PatientTable - Class in de.sekmi.histream.export.config

PatientTable() - Constructor for class de.sekmi.histream.export.config.PatientTable

processNode(Node) - Method in class de.sekmi.histream.export.EavTableParser

processNode(Node) - Method in class de.sekmi.histream.export.TableParser

R

row(String[]) - Method in interface de.sekmi.histream.export.TableWriter

S

setDefaultNamespace(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

setErrorHandler(Consumer<ObservationException>) - Method in class de.sekmi.histream.export.TableExport

Specify an error handler to handle ObservationException during the TableExport.export(ObservationSupplier, ExportWriter) operation.

setFileExtension(String) - Method in class de.sekmi.histream.export.csv.CSVWriter

Set the file name extension for table files (e.g.

setNamespaceContext(NamespaceContext) - Method in class de.sekmi.histream.export.NoOpStreamWriter

setPatientTableName(String) - Method in class de.sekmi.histream.export.csv.CSVWriter

setPrefix(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

setVisitTableName(String) - Method in class de.sekmi.histream.export.csv.CSVWriter

T

TableExport - Class in de.sekmi.histream.export

Primary class for exporting encounter/visit based tables.

TableExport(ExportDescriptor) - Constructor for class de.sekmi.histream.export.TableExport

TableParser - Class in de.sekmi.histream.export

Parses a XML fragment for row values

TableParser(AbstractTable, TableWriter, XPath) - Constructor for class de.sekmi.histream.export.TableParser

TableWriter - Interface in de.sekmi.histream.export

U

ungroupedConcepts() - Method in class de.sekmi.histream.export.config.Concepts

V

VisitFragmentSupplier - Class in de.sekmi.histream.export

VisitFragmentSupplier(ObservationSupplier) - Constructor for class de.sekmi.histream.export.VisitFragmentSupplier

VisitTable - Class in de.sekmi.histream.export.config

VisitTable() - Constructor for class de.sekmi.histream.export.config.VisitTable

W

writeAttribute(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeAttribute(String, String, String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeAttribute(String, String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeCData(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeCharacters(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeCharacters(char[], int, int) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeComment(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeDefaultNamespace(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeDTD(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeEmptyElement(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeEmptyElement(String, String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeEmptyElement(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeEndDocument() - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeEndElement() - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeEntityRef(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeNamespace(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeProcessingInstruction(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeProcessingInstruction(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeStartDocument() - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeStartDocument(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeStartDocument(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeStartElement(String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeStartElement(String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

writeStartElement(String, String, String) - Method in class de.sekmi.histream.export.NoOpStreamWriter

A C D E F G H I N O P R S T U V W