de.samply.directory_sync

Class Sync

java.lang.Object

de.samply.directory_sync.Sync

public class Sync
extends Object

Provides functionality to synchronize MOLGENIS directory and FHIR server in both directions.

Constructor Summary

Constructors

Constructor and Description
Sync(FhirApi fhirApi, FhirReporting fhirReporting, DirectoryApi directoryApi, DirectoryService directoryService)

Method Summary

Modifier and Type	Method and Description
static void	main(String[] args)
List<org.hl7.fhir.r4.model.OperationOutcome>	syncCollectionSizesToDirectory() Updates collection sample count information for all collections that exist with the same BBMRI-ERIC identifier on the FHIR server and in the directory.
List<org.hl7.fhir.r4.model.OperationOutcome>	updateAllBiobanksOnFhirServerIfNecessary() Updates all biobanks from the FHIR server with information from the Directory.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

Sync

public Sync(FhirApi fhirApi,
            FhirReporting fhirReporting,
            DirectoryApi directoryApi,
            DirectoryService directoryService)

Method Detail

main

public static void main(String[] args)

updateAllBiobanksOnFhirServerIfNecessary

public List<org.hl7.fhir.r4.model.OperationOutcome> updateAllBiobanksOnFhirServerIfNecessary()

Updates all biobanks from the FHIR server with information from the Directory.

Returns:

the individual OperationOutcomes from each update

syncCollectionSizesToDirectory

public List<org.hl7.fhir.r4.model.OperationOutcome> syncCollectionSizesToDirectory()

Updates collection sample count information for all collections that exist with the same BBMRI-ERIC identifier on the FHIR server and in the directory.

Returns:

the outcome of the directory update operation.