de.samply.common.ldmclient.centraxx

Class LdmClientCentraxx

java.lang.Object

de.samply.common.ldmclient.AbstractLdmClient<T_RESULT,ResultStatisticsT,ErrorT>

de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

de.samply.common.ldmclient.centraxx.LdmClientCentraxx

public class LdmClientCentraxx
extends de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

Client to communicate with the local datamanagement implementation "Centraxx".

Field Summary

Fields inherited from class de.samply.common.ldmclient.LdmClientView

CACHE_DEFAULT_SIZE

Fields inherited from class de.samply.common.ldmclient.AbstractLdmClient

ERROR_CODE_DATE_PARSING_ERROR, ERROR_CODE_UNCLASSIFIED_WITH_STACKTRACE, ERROR_CODE_UNIMPLEMENTED, ERROR_CODE_UNKNOWN_MDRKEYS, REST_PARAM_PAGE, REST_PATH_REQUESTS, REST_PATH_RESULT, REST_PATH_STATS, REST_RESULTS_ONLY_SUFFIX

Constructor Summary

Constructors

Constructor and Description
LdmClientCentraxx(org.apache.http.impl.client.CloseableHttpClient httpClient, String centraxxBaseUrl)
LdmClientCentraxx(org.apache.http.impl.client.CloseableHttpClient httpClient, String centraxxBaseUrl, boolean useCaching)
LdmClientCentraxx(org.apache.http.impl.client.CloseableHttpClient httpClient, String centraxxBaseUrl, boolean useCaching, int cacheSize)

Method Summary

Modifier and Type	Method and Description
protected de.samply.share.model.ccp.View	convertCommonViewToSpecificView(de.samply.share.model.common.View view)
de.samply.common.ldmclient.model.LdmQueryResult	convertQueryResultStatisticToCommonQueryResultStatistic(QueryResultStatistic queryResultStatistic) Transforms a CCP QueryResultStatistic to a common QueryResultStatistic.
protected de.samply.common.ldmclient.model.LdmQueryResult	convertQueryResultStatisticToCommonQueryResultStatistic(de.samply.share.model.common.QueryResultStatistic qrs)
protected de.samply.common.ldmclient.model.LdmQueryResult	convertSpecificErrorToCommonError(de.samply.share.model.ccp.Error error)
protected de.samply.share.model.common.View	convertSpecificViewToCommonView(de.samply.share.model.ccp.View ccpView)
de.samply.share.model.ccp.QueryResult	exportQuery(de.samply.share.model.ccp.QueryResult queryResult) Todo.
protected Class<de.samply.share.model.ccp.Error>	getErrorClass()
protected String	getFullPath(boolean statisticsOnly)
protected Class<?>	getObjectFactoryClassForPostView()
protected Class<?>	getObjectFactoryClassForResult()
de.samply.share.model.ccp.QueryResult	getResult(String location)
protected Class<de.samply.share.model.ccp.QueryResult>	getResultClass()
protected Class<de.samply.share.model.ccp.View>	getSpecificViewClass()
protected Class<de.samply.share.model.common.QueryResultStatistic>	getStatisticsClass()
de.samply.common.ldmclient.model.LdmQueryResult	getStatsOrError(String location)
String	getUserAgentInfo()
String	getVersionString()
boolean	isLdmCentraxx()

Methods inherited from class de.samply.common.ldmclient.LdmClientView

addHttpHeader, addHttpHeaders, cleanQueryResultsCache, getResultPage, isLdmSamplystoreBiobank, isResultPageAvailable, postView, postView

Methods inherited from class de.samply.common.ldmclient.AbstractLdmClient

getError, getHttpClient, getLdmBaseUrl, getQueryResultStatistic, getResultCount

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

LdmClientCentraxx

public LdmClientCentraxx(org.apache.http.impl.client.CloseableHttpClient httpClient,
                         String centraxxBaseUrl)
                  throws de.samply.common.ldmclient.LdmClientException

Throws:

de.samply.common.ldmclient.LdmClientException

LdmClientCentraxx

public LdmClientCentraxx(org.apache.http.impl.client.CloseableHttpClient httpClient,
                         String centraxxBaseUrl,
                         boolean useCaching)
                  throws de.samply.common.ldmclient.LdmClientException

Throws:

de.samply.common.ldmclient.LdmClientException

LdmClientCentraxx

public LdmClientCentraxx(org.apache.http.impl.client.CloseableHttpClient httpClient,
                         String centraxxBaseUrl,
                         boolean useCaching,
                         int cacheSize)
                  throws de.samply.common.ldmclient.LdmClientException

Throws:

de.samply.common.ldmclient.LdmClientException

Method Detail

isLdmCentraxx

public boolean isLdmCentraxx()

Overrides:

isLdmCentraxx in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

getFullPath

protected String getFullPath(boolean statisticsOnly)

Overrides:

getFullPath in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

getSpecificViewClass

protected Class<de.samply.share.model.ccp.View> getSpecificViewClass()

Specified by:

getSpecificViewClass in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

getResultClass

protected Class<de.samply.share.model.ccp.QueryResult> getResultClass()

Specified by:

getResultClass in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

getStatisticsClass

protected Class<de.samply.share.model.common.QueryResultStatistic> getStatisticsClass()

Specified by:

getStatisticsClass in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

getErrorClass

protected Class<de.samply.share.model.ccp.Error> getErrorClass()

Specified by:

getErrorClass in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

getObjectFactoryClassForPostView

protected Class<?> getObjectFactoryClassForPostView()

Specified by:

getObjectFactoryClassForPostView in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

getObjectFactoryClassForResult

protected Class<?> getObjectFactoryClassForResult()

Specified by:

getObjectFactoryClassForResult in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

convertCommonViewToSpecificView

protected de.samply.share.model.ccp.View convertCommonViewToSpecificView(de.samply.share.model.common.View view)
                                                                  throws JAXBException

Specified by:

convertCommonViewToSpecificView in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

Throws:

JAXBException

convertSpecificViewToCommonView

protected de.samply.share.model.common.View convertSpecificViewToCommonView(de.samply.share.model.ccp.View ccpView)
                                                                     throws JAXBException

Specified by:

convertSpecificViewToCommonView in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

Throws:

JAXBException

convertQueryResultStatisticToCommonQueryResultStatistic

public de.samply.common.ldmclient.model.LdmQueryResult convertQueryResultStatisticToCommonQueryResultStatistic(QueryResultStatistic queryResultStatistic)

Transforms a CCP QueryResultStatistic to a common QueryResultStatistic.

Parameters:

queryResultStatistic - the QueryResultStatistic in the centraxx namespace

Returns:

the QueryResultStatistic in the common namespace

convertQueryResultStatisticToCommonQueryResultStatistic

protected de.samply.common.ldmclient.model.LdmQueryResult convertQueryResultStatisticToCommonQueryResultStatistic(de.samply.share.model.common.QueryResultStatistic qrs)
                                                                                                           throws JAXBException

Specified by:

convertQueryResultStatisticToCommonQueryResultStatistic in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

Throws:

JAXBException

convertSpecificErrorToCommonError

protected de.samply.common.ldmclient.model.LdmQueryResult convertSpecificErrorToCommonError(de.samply.share.model.ccp.Error error)
                                                                                     throws JAXBException

Specified by:

convertSpecificErrorToCommonError in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

Throws:

JAXBException

getResult

public de.samply.share.model.ccp.QueryResult getResult(String location)
                                                throws de.samply.common.ldmclient.LdmClientException

Specified by:

getResult in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

Throws:

de.samply.common.ldmclient.LdmClientException

getVersionString

public String getVersionString()
                        throws de.samply.common.ldmclient.LdmClientException

Specified by:

getVersionString in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

Throws:

de.samply.common.ldmclient.LdmClientException

getUserAgentInfo

public String getUserAgentInfo()
                        throws de.samply.common.ldmclient.LdmClientException

Specified by:

getUserAgentInfo in class de.samply.common.ldmclient.AbstractLdmClient<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error>

Throws:

de.samply.common.ldmclient.LdmClientException

getStatsOrError

public de.samply.common.ldmclient.model.LdmQueryResult getStatsOrError(String location)
                                                                throws de.samply.common.ldmclient.LdmClientException

Overrides:

getStatsOrError in class de.samply.common.ldmclient.LdmClientView<de.samply.share.model.ccp.QueryResult,de.samply.share.model.common.QueryResultStatistic,de.samply.share.model.ccp.Error,de.samply.share.model.ccp.View>

Throws:

de.samply.common.ldmclient.LdmClientException

exportQuery

public de.samply.share.model.ccp.QueryResult exportQuery(de.samply.share.model.ccp.QueryResult queryResult)
                                                  throws JAXBException,
                                                         de.samply.common.ldmclient.LdmClientException,
                                                         InterruptedException,
                                                         IOException

Todo.

Parameters:

queryResult - Todo.

Returns:

Todo.

Throws:

JAXBException - Todo.

de.samply.common.ldmclient.LdmClientException - Todo.

InterruptedException - Todo.

IOException - Todo.