Package de.julielab.bioportal.ontologies

Class AnnotationPropertySet

java.lang.Object

de.julielab.bioportal.ontologies.AnnotationPropertySet

public class AnnotationPropertySet
extends Object

This class defines the relevant annotation properties as given on the BioPortal mailing list from Michael Dorf:

We first determine whether the prefLabelProperty, synonymProperty, definitionProperty are set and use them. If those aren't set, we default to skos:prefLabel and rdfs:label in that order. If no skos:prefLabel or rdfs:label exists, we use the last fragment of the URI of the class as the prefLabel. A similar rule applies to synonyms and definitions using the properties skos:altLabel and skos:definition respectively.

Author:

faessler

Constructor Summary

Constructors

Constructor	Description
AnnotationPropertySet(org.semanticweb.owlapi.model.OWLOntologyManager ontologyManager, Submission submission)
AnnotationPropertySet(org.semanticweb.owlapi.model.OWLOntologyManager ontologyManager, File submissionFile)

Method Summary

Modifier and Type	Method	Description
List<org.semanticweb.owlapi.model.OWLAnnotationProperty>	getDefinitionProps()
List<org.semanticweb.owlapi.model.OWLAnnotationProperty>	getObsoleteProps()
List<org.semanticweb.owlapi.model.OWLAnnotationProperty>	getPrefNameProps()
List<org.semanticweb.owlapi.model.OWLAnnotationProperty>	getSynonymProps()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

AnnotationPropertySet

public AnnotationPropertySet(org.semanticweb.owlapi.model.OWLOntologyManager ontologyManager,
                             Submission submission)

AnnotationPropertySet

public AnnotationPropertySet(org.semanticweb.owlapi.model.OWLOntologyManager ontologyManager,
                             File submissionFile)
                      throws IOException

Throws:

IOException

Method Detail

getPrefNameProps

public List<org.semanticweb.owlapi.model.OWLAnnotationProperty> getPrefNameProps()

getSynonymProps

public List<org.semanticweb.owlapi.model.OWLAnnotationProperty> getSynonymProps()

getDefinitionProps

public List<org.semanticweb.owlapi.model.OWLAnnotationProperty> getDefinitionProps()

getObsoleteProps

public List<org.semanticweb.owlapi.model.OWLAnnotationProperty> getObsoleteProps()