Package de.julielab.jcore.reader.xml

Class XMLDBMultiplier

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.JCasMultiplier_ImplBase

de.julielab.jcore.reader.db.DBMultiplier

de.julielab.jcore.reader.xml.XMLDBMultiplier

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

public class XMLDBMultiplier
extends de.julielab.jcore.reader.db.DBMultiplier

Field Summary

Fields

Modifier and Type	Field	Description
protected String	mappingFileStr
static String	PARAM_ADD_SHA_HASH
static String	PARAM_ADD_TO_VISIT_KEYS
static String	PARAM_ADD_UNCHANGED_DOCUMENT_TEXT_FLAG
static String	PARAM_MAPPING_FILE
static String	PARAM_ROW_MAPPING
static String	PARAM_TABLE_DOCUMENT
static String	PARAM_TABLE_DOCUMENT_SCHEMA
static String	PARAM_TO_VISIT_KEYS
static String	PARAM_TRUNCATE_AT_SIZE
protected String[]	rowMappingArray
protected de.julielab.jcore.reader.xmlmapper.mapper.XMLMapper	xmlMapper	Mapper which maps medline XML to a CAS with the specified UIMA type system via an XML configuration file.

Fields inherited from class de.julielab.jcore.reader.db.DBMultiplier

dataTable, dbc, documentDataIterator, readDataTable, schemaNames, tableName, tables

Constructor Summary

Constructors

Constructor	Description
XMLDBMultiplier()

Method Summary

Modifier and Type	Method	Description
protected List<Map<String,Object>>	getAllRetrievedColumns()
void	initialize(org.apache.uima.UimaContext aContext)
org.apache.uima.cas.AbstractCas	next()
void	process(org.apache.uima.jcas.JCas aJCas)

Methods inherited from class de.julielab.jcore.reader.db.DBMultiplier

getDataBaseConnector, hasNext

Methods inherited from class org.apache.uima.analysis_component.JCasMultiplier_ImplBase

getCasInstancesRequired, getEmptyJCas, getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, collectionProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PARAM_ROW_MAPPING

public static final String PARAM_ROW_MAPPING

See Also:

Constant Field Values

PARAM_MAPPING_FILE

public static final String PARAM_MAPPING_FILE

See Also:

Constant Field Values

PARAM_ADD_SHA_HASH

public static final String PARAM_ADD_SHA_HASH

See Also:

Constant Field Values

PARAM_TABLE_DOCUMENT

public static final String PARAM_TABLE_DOCUMENT

See Also:

Constant Field Values

PARAM_TABLE_DOCUMENT_SCHEMA

public static final String PARAM_TABLE_DOCUMENT_SCHEMA

See Also:

Constant Field Values

PARAM_TO_VISIT_KEYS

public static final String PARAM_TO_VISIT_KEYS

See Also:

Constant Field Values

PARAM_ADD_TO_VISIT_KEYS

public static final String PARAM_ADD_TO_VISIT_KEYS

See Also:

Constant Field Values

PARAM_ADD_UNCHANGED_DOCUMENT_TEXT_FLAG

public static final String PARAM_ADD_UNCHANGED_DOCUMENT_TEXT_FLAG

See Also:

Constant Field Values

PARAM_TRUNCATE_AT_SIZE

public static final String PARAM_TRUNCATE_AT_SIZE

See Also:

Constant Field Values

xmlMapper

protected de.julielab.jcore.reader.xmlmapper.mapper.XMLMapper xmlMapper

Mapper which maps medline XML to a CAS with the specified UIMA type system via an XML configuration file.

rowMappingArray

protected String[] rowMappingArray

mappingFileStr

protected String mappingFileStr

Constructor Detail

XMLDBMultiplier

public XMLDBMultiplier()

Method Detail

initialize

public void initialize(org.apache.uima.UimaContext aContext)
                throws org.apache.uima.resource.ResourceInitializationException

Specified by:

initialize in interface org.apache.uima.analysis_component.AnalysisComponent

Overrides:

initialize in class de.julielab.jcore.reader.db.DBMultiplier

Throws:

org.apache.uima.resource.ResourceInitializationException

process

public void process(org.apache.uima.jcas.JCas aJCas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Overrides:

process in class de.julielab.jcore.reader.db.DBMultiplier

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

next

public org.apache.uima.cas.AbstractCas next()
                                     throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

getAllRetrievedColumns

protected List<Map<String,Object>> getAllRetrievedColumns()