Package de.julielab.jcore.consumer.xmi

Class AnnotationTableManager

java.lang.Object

de.julielab.jcore.consumer.xmi.AnnotationTableManager

public class AnnotationTableManager
extends Object

Field Summary

Fields

Modifier and Type	Field	Description
static String	ANNOTATION_LIST_TABLE
static String	TABLE_NAME

Constructor Summary

Constructors

Constructor	Description
AnnotationTableManager(de.julielab.costosys.dbconnection.DataBaseConnector dbc, String rawDocumentTableName, List<String> qualifiedAnnotationsToStore, boolean binaryAnnotationColumns, String documentTableSchema, Boolean storeAll, Boolean storeBaseDocument, String defaultAnnotationQualifier, String xmiMetaSchema)

Method Summary

Modifier and Type	Method	Description
static String	convertQualifiedAnnotationTypeToColumnName(String qualifiedAnnotationName, String defaultAnnotationColumnQualifier)	Converts potentially qualified annotation types to Postgres-valid column names.
String	convertUnqualifiedAnnotationTypetoColumnName(String typeName, boolean storeAll)	Normalizes type name by replacing dots "." with underscores "_" and prepending the default annotation qualifier prefix ONLY IF the option storeAll is set to FALSE.

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

ANNOTATION_LIST_TABLE

public static final String ANNOTATION_LIST_TABLE

See Also:

Constant Field Values

TABLE_NAME

public static final String TABLE_NAME

See Also:

Constant Field Values

Constructor Detail

AnnotationTableManager

public AnnotationTableManager(de.julielab.costosys.dbconnection.DataBaseConnector dbc,
                              String rawDocumentTableName,
                              List<String> qualifiedAnnotationsToStore,
                              boolean binaryAnnotationColumns,
                              String documentTableSchema,
                              Boolean storeAll,
                              Boolean storeBaseDocument,
                              String defaultAnnotationQualifier,
                              String xmiMetaSchema)
                       throws de.julielab.costosys.dbconnection.util.TableSchemaMismatchException

Throws:

de.julielab.costosys.dbconnection.util.TableSchemaMismatchException

Method Detail

convertQualifiedAnnotationTypeToColumnName

public static String convertQualifiedAnnotationTypeToColumnName(String qualifiedAnnotationName,
                                                                String defaultAnnotationColumnQualifier)

Converts potentially qualified annotation types to Postgres-valid column names.

Examples:

de.julielab.jcore.types.Token -> de_julielab_types_token

experiments:de.julielab.jcore.types.Gene -> experiments$de_julielab_jcore_types_gene

Note that this method cannot handle the case where the annotation name was originally qualified but now only the unqualified name is passed. In this case, the default qualifier will be added even if the name was meant to have another specific qualifier in the UIMA descriptor. Use convertUnqualifiedAnnotationTypetoColumnName(String, boolean) for such cases.

Parameters:

qualifiedAnnotationName - The annotation name to convert, optionally with a qualification prefix.

defaultAnnotationColumnQualifier -

Returns:

The Postgres compatible column name for this annotation name.

See Also:

convertUnqualifiedAnnotationTypetoColumnName(String, boolean)

convertUnqualifiedAnnotationTypetoColumnName

public String convertUnqualifiedAnnotationTypetoColumnName(String typeName,
                                                           boolean storeAll)

Normalizes type name by replacing dots "." with underscores "_" and prepending the default annotation qualifier prefix ONLY IF the option storeAll is set to FALSE. If storeAll is true, the table name is returned unchanged.

This method also works when the typeName is unqualified but was given qualified to the constructor of this class.

Parameters:

typeName - the table name to normalize

storeAll - whether or not the complete document XMI is supposed to be stored

Returns:

The normalized table name

See Also:

convertQualifiedAnnotationTypeToColumnName(String, String)