Uses of Class edu.uchsc.ccp.nlp.ei.mutation.MutationException (JCoRe Mutation Finder AE 2.6.1 API)

Packages that use MutationException
Package Description

edu.uchsc.ccp.nlp.ei.mutation

Uses of MutationException in edu.uchsc.ccp.nlp.ei.mutation

Methods in edu.uchsc.ccp.nlp.ei.mutation that throw MutationException
Modifier and Type	Method	Description
`static PointMutation`	PointMutation.`createPointMutationFrom_wNm(String wNm)`	Create PointMutation from wNm-format, single-letter abbreviated mention.
`abstract Map<Mutation,Set<int[]>>`	MutationExtractor.`extractMutations(String rawText)`	Extract point mutations mentions from raw_text and return them in a map.
`Map<Mutation,Set<int[]>>`	MutationFinder.`extractMutations(String rawText)`	Extract point mutations mentions from raw_text and return them in a map.
`char`	PointMutation.`normalizeResidueIdentity(String residue)`	Normalize three-letter and full residue names to their one-letter abbreviations.

Constructors in edu.uchsc.ccp.nlp.ei.mutation that throw MutationException
Constructor	Description
`Mutation(int position)`
`Mutation(String position)`
`PointMutation(int position, String wtResidue, String mutResidue)`	Initialize the object and call the base class constructor.
`PointMutation(String position, String wtResidue, String mutResidue)`