Uses of Interface
edu.umass.cs.mallet.base.types.Sequence

Packages that use Sequence

Package	Description
edu.umass.cs.mallet.base.extract
edu.umass.cs.mallet.base.fst
edu.umass.cs.mallet.base.fst.confidence
edu.umass.cs.mallet.base.pipe.iterator
edu.umass.cs.mallet.base.types
edu.umass.cs.mallet.projects.seg_plus_coref
edu.umass.cs.mallet.projects.seg_plus_coref.coreference
edu.umass.cs.mallet.projects.seg_plus_coref.ie

Uses of Sequence in edu.umass.cs.mallet.base.extract

Subinterfaces of Sequence in edu.umass.cs.mallet.base.extract

Modifier and Type	Interface and Description
interface	Tokenization

Classes in edu.umass.cs.mallet.base.extract that implement Sequence

Modifier and Type	Class and Description
class	LabeledSpans Created: Oct 31, 2004
class	StringTokenization

Methods in edu.umass.cs.mallet.base.extract that return Sequence

Modifier and Type	Method and Description
Sequence	DocumentExtraction.getPredictedLabels()
Sequence	CRFExtractor.pipeInput(Object input)

Methods in edu.umass.cs.mallet.base.extract with parameters of type Sequence

Modifier and Type	Method and Description
LabeledSpans	TokenizationFilter.constructLabeledSpans(LabelAlphabet dict, Object document, Label backgroundTag, Tokenization input, Sequence seq) Converts a the sequence of labels into a set of labeled spans.
LabeledSpans	HierarchicalTokenizationFilter.constructLabeledSpans(LabelAlphabet dict, Object document, Label backgroundTag, Tokenization input, Sequence seq)
LabeledSpans	DefaultTokenizationFilter.constructLabeledSpans(LabelAlphabet dict, Object document, Label backgroundTag, Tokenization input, Sequence seq)
LabeledSpans	ConfidenceTokenizationFilter.constructLabeledSpans(LabelAlphabet dict, Object document, Label backgroundTag, Tokenization input, Sequence seq)
LabeledSpans	BIOTokenizationFilter.constructLabeledSpans(LabelAlphabet dict, Object document, Label backgroundTag, Tokenization input, Sequence seq)

Constructors in edu.umass.cs.mallet.base.extract with parameters of type Sequence

Constructor and Description
DocumentExtraction(String name, LabelAlphabet dict, Tokenization input, Sequence predicted, Sequence target, String background)
DocumentExtraction(String name, LabelAlphabet dict, Tokenization input, Sequence predicted, Sequence target, String background, TokenizationFilter filter)
DocumentExtraction(String name, LabelAlphabet dict, Tokenization input, Sequence predicted, String background)
Extraction(Extractor extractor, LabelAlphabet dict, String name, Tokenization input, Sequence output, String background) Creates an extration given a sequence output by some kind of per-sequece labeler, like an HMM or a CRF.

Uses of Sequence in edu.umass.cs.mallet.base.fst

Methods in edu.umass.cs.mallet.base.fst that return Sequence

Modifier and Type	Method and Description
static Sequence[]	SimpleTagger.apply(Transducer model, Sequence input, int k) Apply a transducer to an input sequence to produce the k highest-scoring output sequences.
Sequence	Transducer.ViterbiPath.getBestStates() Returns the maximum-value state sequence from this Lattice.
Sequence	Segment.getInput()
Sequence	Segment.getPredicted()
Sequence	Segment.getSegmentInputSequence()
Sequence	Segment.getTruth()
protected Sequence[]	Transducer.ViterbiPath_NBest.NBestBackwardASearch(int N)
Sequence[]	Transducer.ViterbiLattice.outputNBest(int n)
Sequence[]	CRFByGISUpdate.predict(InstanceList testing) This method is deprecated.
Sequence[]	CRF4.predict(InstanceList testing) This method is deprecated.
Sequence[]	CRF3.predict(InstanceList testing) This method is deprecated.
Sequence	CRF4.transduce(Object unpipedInput)
Sequence	Transducer.transduce(Sequence input) Converts the given sequence into another sequence according to this transducer.
Sequence	CRF4.transduce(Sequence input)

Methods in edu.umass.cs.mallet.base.fst with parameters of type Sequence

Modifier and Type	Method and Description
static Sequence[]	SimpleTagger.apply(Transducer model, Sequence input, int k) Apply a transducer to an input sequence to produce the k highest-scoring output sequences.
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, boolean increment)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, Sequence outputSequence)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, Sequence outputSequence, boolean increment)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, Sequence outputSequence, boolean increment, boolean saveXis, LabelAlphabet outputAlphabet)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, Sequence outputSequence, boolean increment, LabelAlphabet outputAlphabet)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, Sequence outputSequence, int[] constraints)
Transducer.Lattice	Transducer.forwardBackward(Sequence inputSequence, Sequence outputSequence, Segment requiredSegment, Sequence constrainedSequence) Create constrained lattice such that all paths pass through the the labeling of requiredSegment as indicated by constrainedSequence
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, boolean increment)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, Sequence outputSequence)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, Sequence outputSequence, boolean increment)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, Sequence outputSequence, boolean increment, boolean saveXis, LabelAlphabet outputAlphabet)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, Sequence outputSequence, boolean increment, LabelAlphabet outputAlphabet)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, Sequence outputSequence, int[] constraints)
Transducer.BeamLattice	Transducer.forwardBackwardBeam(Sequence inputSequence, Sequence outputSequence, Segment requiredSegment, Sequence constrainedSequence) Create constrained lattice such that all paths pass through the the labeling of requiredSegment as indicated by constrainedSequence
Transducer.ViterbiLattice	Transducer.getViterbiLattice(Sequence input, Sequence output, int cacheSize)
int	MultiSegmentationEvaluator.numIncorrectSegments(Sequence trueOutput, Sequence predOutput) returns the number of incorrect segments in predOutput
void	Segment.setPredicted(Sequence predicted)
double	Transducer.ViterbiPath.tokenAccuracy(Sequence referenceOutput)
double	Transducer.ViterbiPathBeam.tokenAccuracy(Sequence referenceOutput)
double	Transducer.ViterbiPathBeamKL.tokenAccuracy(Sequence referenceOutput)
double	Transducer.ViterbiPathBeamB.tokenAccuracy(Sequence referenceOutput)
double	Transducer.ViterbiPathBeamFB.tokenAccuracy(Sequence referenceOutput)
double	Transducer.ViterbiPath.tokenAccuracy(Sequence referenceOutput, PrintWriter out)
double	Transducer.ViterbiPathBeam.tokenAccuracy(Sequence referenceOutput, PrintWriter out)
double	Transducer.ViterbiPathBeamKL.tokenAccuracy(Sequence referenceOutput, PrintWriter out)
double	Transducer.ViterbiPathBeamB.tokenAccuracy(Sequence referenceOutput, PrintWriter out)
double	Transducer.ViterbiPathBeamFB.tokenAccuracy(Sequence referenceOutput, PrintWriter out)
Sequence	Transducer.transduce(Sequence input) Converts the given sequence into another sequence according to this transducer.
Sequence	CRF4.transduce(Sequence input)
Transducer.TransitionIterator	Transducer.State.transitionIterator(Sequence input, int inputPosition)
Transducer.TransitionIterator	FeatureTransducer.State.transitionIterator(Sequence inputSequence, int inputPosition)
abstract Transducer.TransitionIterator	Transducer.State.transitionIterator(Sequence input, int inputPosition, Sequence output, int outputPosition)
Transducer.TransitionIterator	MEMM.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	HMM.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	FeatureTransducer.State.transitionIterator(Sequence input, int inputPosition, Sequence output, int outputPosition)
Transducer.TransitionIterator	CRF_PL.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	CRFByGISUpdate.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	CRF4.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	CRF3.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	CRF2.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.TransitionIterator	CRF.State.transitionIterator(Sequence inputSequence, int inputPosition, Sequence outputSequence, int outputPosition)
Transducer.ViterbiPath_NBest	Transducer.viterbiPath_NBest(Sequence inputSequence, int N)
Transducer.ViterbiPath_NBest	Transducer.viterbiPath_NBest(Sequence inputSequence, Sequence outputSequence, int N)
Transducer.ViterbiPath	Transducer.viterbiPath(Sequence inputSequence)
Transducer.ViterbiPath	CRF4.viterbiPath(Sequence inputSequence, boolean keepLattice)
Transducer.ViterbiPath	Transducer.viterbiPath(Sequence inputSequence, Sequence outputSequence)
Transducer.ViterbiPathBeam	Transducer.viterbiPathBeam(Sequence inputSequence)
Transducer.ViterbiPathBeam	Transducer.viterbiPathBeam(Sequence inputSequence, int Bwidth)
Transducer.ViterbiPathBeam	Transducer.viterbiPathBeam(Sequence inputSequence, Sequence outputSequence, int Bwidth)
Transducer.ViterbiPathBeamB	Transducer.viterbiPathBeamB(Sequence inputSequence)
Transducer.ViterbiPathBeamB	Transducer.viterbiPathBeamB(Sequence inputSequence, int Bwidth)
Transducer.ViterbiPathBeamB	Transducer.viterbiPathBeamB(Sequence inputSequence, Sequence outputSequence, int Bwidth)
Transducer.ViterbiPathBeamFB	Transducer.viterbiPathBeamFB(Sequence inputSequence)
Transducer.ViterbiPathBeamFB	Transducer.viterbiPathBeamFB(Sequence inputSequence, int Bwidth)
Transducer.ViterbiPathBeamFB	Transducer.viterbiPathBeamFB(Sequence inputSequence, Sequence outputSequence, int Bwidth)
Transducer.ViterbiPathBeamKL	Transducer.viterbiPathBeamKL(Sequence inputSequence)
Transducer.ViterbiPathBeamKL	Transducer.viterbiPathBeamKL(Sequence inputSequence, int Bwidth)
Transducer.ViterbiPathBeamKL	Transducer.viterbiPathBeamKL(Sequence inputSequence, Sequence outputSequence, int Bwidth)

Constructors in edu.umass.cs.mallet.base.fst with parameters of type Sequence

Constructor and Description
BeamLattice(Sequence input, Sequence output, boolean increment)
BeamLattice(Sequence input, Sequence output, boolean increment, boolean saveXis)
BeamLattice(Sequence input, Sequence output, boolean increment, boolean saveXis, LabelAlphabet outputAlphabet)
BeamLattice(Sequence input, Sequence output, boolean increment, LabelAlphabet outputAlphabet, int[] constraints) Create a lattice that constrains its transitions such that the pairs in "constraints" are adhered to.
Lattice(Sequence input, Sequence output, boolean increment)
Lattice(Sequence input, Sequence output, boolean increment, boolean saveXis)
Lattice(Sequence input, Sequence output, boolean increment, boolean saveXis, LabelAlphabet outputAlphabet)
Lattice(Sequence input, Sequence output, boolean increment, LabelAlphabet outputAlphabet, int[] constraints) Create a lattice that constrains its transitions such that the pairs in "constraints" are adhered to.
Segment(Sequence input, Sequence pred, Sequence truth, int start, int end, Object startTag, Object inTag)
ViterbiLattice(Sequence inputSequence, Sequence outputSequence, int maxCaches)
ViterbiPath_NBest(Sequence inputSequence, Sequence outputSequence, int N)
ViterbiPath(Sequence inputSequence, Sequence outputSequence)
ViterbiPath(Sequence inputSequence, Sequence outputSequence, boolean saveLattice)
ViterbiPathBeam(Sequence inputSequence, Sequence outputSequence, boolean saveLattice, int Bwidth)
ViterbiPathBeam(Sequence inputSequence, Sequence outputSequence, int Bwidth)
ViterbiPathBeamB(Sequence inputSequence, Sequence outputSequence, boolean saveLattice, int Bwidth)
ViterbiPathBeamB(Sequence inputSequence, Sequence outputSequence, int Bwidth)
ViterbiPathBeamFB(Sequence inputSequence, Sequence outputSequence, boolean saveLattice, int Bwidth)
ViterbiPathBeamFB(Sequence inputSequence, Sequence outputSequence, int Bwidth)
ViterbiPathBeamKL(Sequence inputSequence, Sequence outputSequence, boolean saveLattice, int Bwidth)
ViterbiPathBeamKL(Sequence inputSequence, Sequence outputSequence, int Bwidth)

Uses of Sequence in edu.umass.cs.mallet.base.fst.confidence

Constructors in edu.umass.cs.mallet.base.fst.confidence with parameters of type Sequence

Constructor and Description
EntityConfidence(double conf, boolean corr, Sequence input, int start, int end)
InstanceWithConfidence(Instance inst, double c, Sequence predicted)

Uses of Sequence in edu.umass.cs.mallet.base.pipe.iterator

Constructors in edu.umass.cs.mallet.base.pipe.iterator with parameters of type Sequence

Constructor and Description
SegmentIterator(Instance instance, Object[] startTags, Object[] inTags, Sequence prediction) Iterate over segments in one instance.
SegmentIterator(Sequence input, Sequence predicted, Sequence truth, Object[] startTags, Object[] inTags) Iterate over segments in one labeled sequence

Uses of Sequence in edu.umass.cs.mallet.base.types

Classes in edu.umass.cs.mallet.base.types that implement Sequence

Modifier and Type	Class and Description
class	ArrayListSequence
class	ArraySequence
class	FeatureSequence An implementation of Sequence that ensures that every Object in the sequence has the same class.
class	FeatureSequenceWithBigrams A FeatureSequence with a parallel record of bigrams, kept in a separate dictionary
class	FeatureVectorSequence
class	LabelSequence
class	LabelsSequence A simple Sequence implementation where all of the elements must be Labels.
class	StringEditFeatureVectorSequence
class	TokenSequence A representation of a piece of text, usually a single word, to which we can attach properties.

Fields in edu.umass.cs.mallet.base.types declared as Sequence

Modifier and Type	Field and Description
protected Sequence	SequencePair.input
protected Sequence	SequencePair.output
protected Sequence[]	SequencePair.outputNBest

Methods in edu.umass.cs.mallet.base.types that return Sequence

Modifier and Type	Method and Description
Sequence	SequencePair.input()
Sequence	SequencePair.output()
Sequence[]	SequencePair.outputNBest()

Constructors in edu.umass.cs.mallet.base.types with parameters of type Sequence

Constructor and Description
ArraySequence(Sequence s, boolean copy)
SequencePair(Sequence input, Sequence output)
SequencePairAlignment(Sequence input, Sequence output, double cost)

Uses of Sequence in edu.umass.cs.mallet.projects.seg_plus_coref

Methods in edu.umass.cs.mallet.projects.seg_plus_coref with parameters of type Sequence

Modifier and Type	Method and Description
protected static void	BaseTUICRF.printSequence(PrintStream outf, String name, Sequence input, Sequence trueOutput, Sequence predOutput)

Uses of Sequence in edu.umass.cs.mallet.projects.seg_plus_coref.coreference

Methods in edu.umass.cs.mallet.projects.seg_plus_coref.coreference with parameters of type Sequence

Modifier and Type	Method and Description
double	ComputeUpperBound1.PairSimilarity(Sequence sequence1, Sequence sequence2, Instance instance1, Instance instance2)

Uses of Sequence in edu.umass.cs.mallet.projects.seg_plus_coref.ie

Methods in edu.umass.cs.mallet.projects.seg_plus_coref.ie that return Sequence

Modifier and Type	Method and Description
Sequence	IEInterface3.viterbiCRFTokenSequence(TokenSequence ts)
Sequence	IEInterface.viterbiCRFTokenSequence(TokenSequence ts)

Methods in edu.umass.cs.mallet.projects.seg_plus_coref.ie with parameters of type Sequence

Modifier and Type	Method and Description
double	IEInterface.InstanceAccuracy(Sequence viterbiSequence, Instance instance)
double	IEInterface.InstanceAccuracy(Sequence viterbiSequence, Sequence targetSequence)
double	IEInterface.InstanceAccuracy(Sequence viterbiSequence, Sequence targetSequence, Instance instance)
static String	IEInterface.printResultInFormat(boolean sgml, Sequence viterbiSequence, TokenSequence tokenSequence)

Constructors in edu.umass.cs.mallet.projects.seg_plus_coref.ie with parameters of type Sequence

Constructor and Description
Segmentation(TokenSequence input, Sequence output)