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All Classes All Packages

A

A2_FILE_PARAM - Static variable in class de.julielab.jcore.consumer.bionlpformat.main.BioEventConsumer

B

BIOEVENT_SERVICE_MODE_PARAM - Static variable in class de.julielab.jcore.consumer.bionlpformat.main.BioEventConsumer

BioEventConsumer - Class in de.julielab.jcore.consumer.bionlpformat.main

BioEventConsumer() - Constructor for class de.julielab.jcore.consumer.bionlpformat.main.BioEventConsumer

BioEventWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

BioEventWriter(Writer, ProteinWriter, EventTriggerWriter, EntityWriter) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.BioEventWriter

C

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.BioEventWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.DocumentWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EntityWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventMentionWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventTriggerWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.MedEventWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.ProteinWriter

close() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

D

de.julielab.jcore.consumer.bionlpformat.main - package de.julielab.jcore.consumer.bionlpformat.main

de.julielab.jcore.consumer.bionlpformat.utils - package de.julielab.jcore.consumer.bionlpformat.utils

DIRECTORY_PARAM - Static variable in class de.julielab.jcore.consumer.bionlpformat.main.BioEventConsumer

DIRECTORY_PARAM - Static variable in class de.julielab.jcore.consumer.bionlpformat.main.MedEventConsumer

DIRECTORY_PARAM - Static variable in class de.julielab.jcore.consumer.bionlpformat.main.SegmentConsumer

DocumentWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

DocumentWriter(Writer) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.DocumentWriter

E

EntityWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

EntityWriter(Writer, String) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.EntityWriter

EventMentionWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

EventMentionWriter(Writer, String) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.EventMentionWriter

EventTriggerWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

EventTriggerWriter(Writer, String) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.EventTriggerWriter

G

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.BioEventWriter

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EntityWriter

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventMentionWriter

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventTriggerWriter

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.MedEventWriter

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.ProteinWriter

getFileWriter() - Method in class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

I

initialize(UimaContext) - Method in class de.julielab.jcore.consumer.bionlpformat.main.BioEventConsumer

initialize(UimaContext) - Method in class de.julielab.jcore.consumer.bionlpformat.main.MedEventConsumer

initialize(UimaContext) - Method in class de.julielab.jcore.consumer.bionlpformat.main.SegmentConsumer

isWritten(EntityMention) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EntityWriter

isWritten(EventMention) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventMentionWriter

isWritten(EventTrigger) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventTriggerWriter

isWritten(Gene) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.ProteinWriter

M

MedEventConsumer - Class in de.julielab.jcore.consumer.bionlpformat.main

MedEventConsumer() - Constructor for class de.julielab.jcore.consumer.bionlpformat.main.MedEventConsumer

MedEventWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

MedEventWriter(Writer, EntityWriter, EventMentionWriter) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.MedEventWriter

P

process(JCas) - Method in class de.julielab.jcore.consumer.bionlpformat.main.BioEventConsumer

process(JCas) - Method in class de.julielab.jcore.consumer.bionlpformat.main.MedEventConsumer

process(JCas) - Method in class de.julielab.jcore.consumer.bionlpformat.main.SegmentConsumer

ProteinWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

ProteinWriter(Writer, String) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.ProteinWriter

S

SegmentConsumer - Class in de.julielab.jcore.consumer.bionlpformat.main

SegmentConsumer() - Constructor for class de.julielab.jcore.consumer.bionlpformat.main.SegmentConsumer

SegmentWriter - Class in de.julielab.jcore.consumer.bionlpformat.utils

SegmentWriter(Writer, String) - Constructor for class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.BioEventWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EntityWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventMentionWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventTriggerWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.MedEventWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.ProteinWriter

setFileWriter(Writer) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

W

write(JCas) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.DocumentWriter

writeEntity(EntityMention) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EntityWriter

writeEvent(EntityMention) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.MedEventWriter

writeEvent(EventMention) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.BioEventWriter

writeEvent(Medication) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventMentionWriter

writeProtein(Gene) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.ProteinWriter

writeSentence(Sentence) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

writeTokens(FSIterator<AnnotationFS>) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

writeTokensOnly(CAS) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.SegmentWriter

writeTrigger(EventTrigger) - Method in class de.julielab.jcore.consumer.bionlpformat.utils.EventTriggerWriter

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