Serialized Form (JCoRe Banner 2.6.1 API)

Package banner.annotation

Class banner.annotation.BEAT extends JFrame implements Serializable

Serialized Fields

annotationFileField
```
JTextField annotationFileField
```
annotationFileLabel
```
JLabel annotationFileLabel
```

annotations

Map<String,List<Annotation>> annotations

annotationsFilename
```
String annotationsFilename
```
annotationTable
```
JTable annotationTable
```
anotationLabel
```
JLabel anotationLabel
```
completeCheckBox
```
JCheckBox completeCheckBox
```
completedTextsFilename
```
String completedTextsFilename
```
conceptLabel
```
JLabel conceptLabel
```
conceptLookupField
```
JTextField conceptLookupField
```

conceptNames

Map<String,List<ConceptName>> conceptNames

concepts
```
Map<String,Concept> concepts
```
conceptTable
```
JTable conceptTable
```
current
```
int current
```

identifier

IndexedMetricSetSimilarity<String,ConceptName> identifier

identifierField
```
JTextField identifierField
```
identifierLabel
```
JLabel identifierLabel
```
incompleteTextIds
```
List<String> incompleteTextIds
```
lookupNames
```
RankedList<ConceptName> lookupNames
```
nextButton
```
JButton nextButton
```
previousButton
```
JButton previousButton
```
progressLabel
```
JLabel progressLabel
```
selectionEnd
```
int selectionEnd
```
selectionStart
```
int selectionStart
```
selectionType
```
String selectionType
```
semanticTypes
```
List<String> semanticTypes
```
textArea
```
JTextArea textArea
```
textFileField
```
JTextField textFileField
```
textFileLabel
```
JLabel textFileLabel
```
textLabel
```
JLabel textLabel
```
texts
```
Map<String,Text> texts
```

Package banner.tagging
- Class banner.tagging.FeatureSet extends Object implements Serializable
  
  serialVersionUID:
  
  -4591127831978244954L
  - Serialized Fields
    - pipe
      
      cc.mallet.pipe.SerialPipes pipe
Package banner.tagging.pipe
- Class banner.tagging.pipe.ChemicalSuffix extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -3442366946904548L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
      
      String prefix
- Class banner.tagging.pipe.LChar extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - prefix
      
      String prefix
- Class banner.tagging.pipe.LemmaPOS extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - expectLemmatiser
      
      boolean expectLemmatiser
    - expectPOSTagger
      
      boolean expectPOSTagger
- Class banner.tagging.pipe.LowerCaseTokenText extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -2682195735816037070L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - matchingRegex
      
      Pattern matchingRegex
    - prefix
      
      String prefix
- Class banner.tagging.pipe.MentionTypeHint extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -163529848335469810L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
      
      String prefix
- Class banner.tagging.pipe.Pretagger extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - prefix
      
      String prefix
- Class banner.tagging.pipe.ProteinSymbols extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -7211355932042290296L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
      
      String prefix
- Class banner.tagging.pipe.RChar extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - prefix
      
      String prefix
- Class banner.tagging.pipe.Sentence2TokenSequence extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - differentType
      
      Sentence.OverlapOption differentType
    - format
      
      TagFormat format
    - mentionTypes
      
      Set<Mention.MentionType> mentionTypes
    - sameType
      
      Sentence.OverlapOption sameType
- Class banner.tagging.pipe.SimFind extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - simFindStoreProteins
      
      HashMap<String,String> simFindStoreProteins
- Class banner.tagging.pipe.TokenLength extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -8834281180687367486L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - matchingRegex
      
      Pattern matchingRegex
    - prefix
      
      String prefix
- Class banner.tagging.pipe.TokenNumberClass extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -2588026412474709552L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - brief
      
      boolean brief
    - matchingRegex
      
      Pattern matchingRegex
    - prefix
      
      String prefix
- Class banner.tagging.pipe.TokenWeight extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
- Class banner.tagging.pipe.TokenWordClass extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  8996255757211528445L
  - Serialization Methods
    - readObject
      
      private void readObject(ObjectInputStream in) throws IOException, ClassNotFoundException
      
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
      
      private void writeObject(ObjectOutputStream out) throws IOException
      
      Throws:
      
      IOException
  - Serialized Fields
    - brief
      
      boolean brief
    - matchingRegex
      
      Pattern matchingRegex
    - prefix
      
      String prefix

Serialized Form

Package banner.annotation

Class banner.annotation.BEAT extends JFrame implements Serializable

Serialized Fields

annotationFileField

annotationFileLabel

annotations

annotationsFilename

annotationTable

anotationLabel

completeCheckBox

completedTextsFilename

conceptLabel

conceptLookupField

conceptNames

concepts

conceptTable

current

identifier

identifierField

identifierLabel

incompleteTextIds

lookupNames

nextButton

previousButton

progressLabel

selectionEnd

selectionStart

selectionType

semanticTypes

textArea

textFileField

textFileLabel

textLabel

texts

Package banner.tagging

Class banner.tagging.FeatureSet extends Object implements Serializable

Serialized Fields

pipe

Package banner.tagging.pipe

Class banner.tagging.pipe.ChemicalSuffix extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

Class banner.tagging.pipe.LChar extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

prefix

Class banner.tagging.pipe.LemmaPOS extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

expectLemmatiser

expectPOSTagger

Class banner.tagging.pipe.LowerCaseTokenText extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

matchingRegex

prefix

Class banner.tagging.pipe.MentionTypeHint extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

Class banner.tagging.pipe.Pretagger extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

prefix

Class banner.tagging.pipe.ProteinSymbols extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

Class banner.tagging.pipe.RChar extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

prefix

Class banner.tagging.pipe.Sentence2TokenSequence extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields