Serialized Form (JCoRe Banner 2.3.0 API)

Package banner.annotation

Class banner.annotation.BEAT extends JFrame implements Serializable

Serialized Fields

progressLabel
```
JLabel progressLabel
```
textFileLabel
```
JLabel textFileLabel
```
textFileField
```
JTextField textFileField
```
annotationFileLabel
```
JLabel annotationFileLabel
```
annotationFileField
```
JTextField annotationFileField
```
identifierLabel
```
JLabel identifierLabel
```
identifierField
```
JTextField identifierField
```
textLabel
```
JLabel textLabel
```
textArea
```
JTextArea textArea
```
anotationLabel
```
JLabel anotationLabel
```
annotationTable
```
JTable annotationTable
```
completeCheckBox
```
JCheckBox completeCheckBox
```
conceptLabel
```
JLabel conceptLabel
```
conceptLookupField
```
JTextField conceptLookupField
```
conceptTable
```
JTable conceptTable
```
previousButton
```
JButton previousButton
```
nextButton
```
JButton nextButton
```
current
```
int current
```
selectionStart
```
int selectionStart
```
selectionEnd
```
int selectionEnd
```
selectionType
```
String selectionType
```
completedTextsFilename
```
String completedTextsFilename
```
annotationsFilename
```
String annotationsFilename
```
incompleteTextIds
```
List<E> incompleteTextIds
```
texts
```
Map<K,V> texts
```
annotations
```
Map<K,V> annotations
```
semanticTypes
```
List<E> semanticTypes
```
concepts
```
Map<K,V> concepts
```
conceptNames
```
Map<K,V> conceptNames
```

identifier

IndexedMetricSetSimilarity<E,V> identifier

lookupNames
```
RankedList<E> lookupNames
```

Package banner.tagging
- Class banner.tagging.FeatureSet extends Object implements Serializable
  
  serialVersionUID:
  
  -4591127831978244954L
  - Serialized Fields
    - pipe
```
cc.mallet.pipe.SerialPipes pipe
```
Package banner.tagging.pipe
- Class banner.tagging.pipe.ChemicalSuffix extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -3442366946904548L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
- Class banner.tagging.pipe.LChar extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - prefix
```
String prefix
```
- Class banner.tagging.pipe.LemmaPOS extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - expectLemmatiser
```
boolean expectLemmatiser
```
    - expectPOSTagger
```
boolean expectPOSTagger
```
- Class banner.tagging.pipe.LowerCaseTokenText extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -2682195735816037070L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
    - matchingRegex
```
Pattern matchingRegex
```
- Class banner.tagging.pipe.MentionTypeHint extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -163529848335469810L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
- Class banner.tagging.pipe.Pretagger extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - prefix
```
String prefix
```
- Class banner.tagging.pipe.ProteinSymbols extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -7211355932042290296L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
- Class banner.tagging.pipe.RChar extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - prefix
```
String prefix
```
- Class banner.tagging.pipe.Sentence2TokenSequence extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - format
```
TagFormat format
```
    - mentionTypes
```
Set<E> mentionTypes
```
    - sameType
```
Sentence.OverlapOption sameType
```
    - differentType
```
Sentence.OverlapOption differentType
```
- Class banner.tagging.pipe.SimFind extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
  - Serialized Fields
    - simFindStoreProteins
```
HashMap<K,V> simFindStoreProteins
```
- Class banner.tagging.pipe.TokenLength extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -8834281180687367486L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
    - matchingRegex
```
Pattern matchingRegex
```
- Class banner.tagging.pipe.TokenNumberClass extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  -2588026412474709552L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
    - matchingRegex
```
Pattern matchingRegex
```
    - brief
```
boolean brief
```
- Class banner.tagging.pipe.TokenWeight extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  1L
- Class banner.tagging.pipe.TokenWordClass extends cc.mallet.pipe.Pipe implements Serializable
  
  serialVersionUID:
  
  8996255757211528445L
  - Serialization Methods
    - readObject
```
private void readObject(ObjectInputStream in)
                 throws IOException,
                        ClassNotFoundException
```
      Throws:
      
      IOException
      
      ClassNotFoundException
    - writeObject
```
private void writeObject(ObjectOutputStream out)
                  throws IOException
```
      Throws:
      
      IOException
  - Serialized Fields
    - prefix
```
String prefix
```
    - matchingRegex
```
Pattern matchingRegex
```
    - brief
```
boolean brief
```

Serialized Form

Package banner.annotation

Class banner.annotation.BEAT extends JFrame implements Serializable

Serialized Fields

progressLabel

textFileLabel

textFileField

annotationFileLabel

annotationFileField

identifierLabel

identifierField

textLabel

textArea

anotationLabel

annotationTable

completeCheckBox

conceptLabel

conceptLookupField

conceptTable

previousButton

nextButton

current

selectionStart

selectionEnd

selectionType

completedTextsFilename

annotationsFilename

incompleteTextIds

texts

annotations

semanticTypes

concepts

conceptNames

identifier

lookupNames

Package banner.tagging

Class banner.tagging.FeatureSet extends Object implements Serializable

Serialized Fields

pipe

Package banner.tagging.pipe

Class banner.tagging.pipe.ChemicalSuffix extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

Class banner.tagging.pipe.LChar extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

prefix

Class banner.tagging.pipe.LemmaPOS extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

expectLemmatiser

expectPOSTagger

Class banner.tagging.pipe.LowerCaseTokenText extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

matchingRegex

Class banner.tagging.pipe.MentionTypeHint extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

Class banner.tagging.pipe.Pretagger extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

prefix

Class banner.tagging.pipe.ProteinSymbols extends cc.mallet.pipe.Pipe implements Serializable

Serialization Methods

readObject

writeObject

Serialized Fields

prefix

Class banner.tagging.pipe.RChar extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields

prefix

Class banner.tagging.pipe.Sentence2TokenSequence extends cc.mallet.pipe.Pipe implements Serializable

Serialized Fields