Serialized Form

Package de.julielab.jules.ae.genemapping

Class de.julielab.jules.ae.genemapping.GeneMappingConfiguration extends java.util.Properties implements Serializable

serialVersionUID:

-1636778667307698253L

Package de.julielab.jules.ae.genemapping.genemodel

Class de.julielab.jules.ae.genemapping.genemodel.GeneSet extends java.util.HashSet<GeneMention> implements Serializable

serialVersionUID:

-4038206150665551536L

Serialized Fields

featureVector

cc.mallet.types.FeatureVector featureVector

instance

cc.mallet.types.Instance instance

isPlural

boolean isPlural

setId

java.util.List<SynHit> setId

specificType

GeneMention.SpecificType specificType

specificTypeConfidence

double specificTypeConfidence

Class de.julielab.jules.ae.genemapping.genemodel.GeneSets extends java.util.HashSet<GeneSet> implements Serializable

serialVersionUID:

-6355234489729844255L

Package de.julielab.jules.ae.genemapping.scoring

Class de.julielab.jules.ae.genemapping.scoring.MaxEntScorerFeaturePipe extends cc.mallet.pipe.Pipe implements Serializable

serialVersionUID:

1L

Serialized Fields

ALPHA

java.lang.String ALPHA

CHAR

java.lang.String CHAR

debug

boolean debug

GREEK

java.lang.String GREEK

GREEK_ALPHA

java.lang.String GREEK_ALPHA

jaroSim

TokenJaroSimilarity jaroSim

lexicalize

boolean lexicalize

MODIFIER

java.lang.String MODIFIER

MOL_WEIGHT

java.lang.String MOL_WEIGHT

NON_DESCRIPTIVE

java.lang.String NON_DESCRIPTIVE

NUMBER

java.lang.String NUMBER

ONE

java.lang.String ONE

Class de.julielab.jules.ae.genemapping.scoring.TokenJaroSimilarity extends com.wcohen.ss.AbstractStringDistance implements Serializable

serialVersionUID:

1L

Package de.julielab.jules.ae.genemapping.utils

Class de.julielab.jules.ae.genemapping.utils.GeneCandidateRetrievalException extends GeneMappingException implements Serializable

serialVersionUID:

-5875237286044582476L

Class de.julielab.jules.ae.genemapping.utils.GeneMapperRuntimeException extends java.lang.RuntimeException implements Serializable

Class de.julielab.jules.ae.genemapping.utils.GeneMappingException extends java.lang.Exception implements Serializable

serialVersionUID:

7207114938075802444L