Package de.julielab.jules.ae.genemapping.genemodel

Enum GeneSpeciesOccurrence

  • All Implemented Interfaces:
    java.io.Serializable, java.lang.Comparable<GeneSpeciesOccurrence>
    public enum GeneSpeciesOccurrence
extends java.lang.Enum<GeneSpeciesOccurrence>
    Descending order of reliability according to Hakenberg et al. (2008) (1) same compound noun: ‘murine Eif4g1’, (2) same phrase, including enumerations: ‘rat and murine Eif4g1’ or (3) same sentence. (4) previous sentence mentions a species, (5) title of abstracts mentions a species, (6) first sentence of abstract mentions a species, (7) a species occurs anywhere in the abstract or (8) a species was annotated as MeSH term. If no species are mentioned anywhere, a default one (9) might be set.

    • Method Detail

      • values

        public static GeneSpeciesOccurrence[] values()
        Returns an array containing the constants of this enum type, in the order they are declared. This method may be used to iterate over the constants as follows: 
        for (GeneSpeciesOccurrence c : GeneSpeciesOccurrence.values())
    System.out.println(c);
        Returns:
        an array containing the constants of this enum type, in the order they are declared

      • valueOf

        public static GeneSpeciesOccurrence valueOf​(java.lang.String name)
        Returns the enum constant of this type with the specified name. The string must match exactly an identifier used to declare an enum constant in this type. (Extraneous whitespace characters are not permitted.)
        Parameters:
        name - the name of the enum constant to be returned.
        Returns:
        the enum constant with the specified name
        Throws:
        java.lang.IllegalArgumentException - if this enum type has no constant with the specified name
        java.lang.NullPointerException - if the argument is null