Uses of Class
com.lahodiuk.ahocorasick.AhoCorasickOptimized

Packages that use AhoCorasickOptimized

Package	Description
com.lahodiuk.ahocorasick
de.julielab.jules.ae.genemapping.genemodel

Uses of AhoCorasickOptimized in com.lahodiuk.ahocorasick

Methods in com.lahodiuk.ahocorasick with parameters of type AhoCorasickOptimized

Modifier and Type	Method	Description
static void	AhoCorasickOptimized.Util.appendAutomatonTransitionGraphviz(AhoCorasickOptimized automaton, java.lang.StringBuilder sb, int state, int charInt)
static java.lang.String	AhoCorasickOptimized.Util.generateGraphvizAutomatonRepresentation(AhoCorasickOptimized automaton, boolean displayEdgesToInitialState)

Uses of AhoCorasickOptimized in de.julielab.jules.ae.genemapping.genemodel

Methods in de.julielab.jules.ae.genemapping.genemodel that return AhoCorasickOptimized

Modifier and Type	Method	Description
AhoCorasickOptimized	GeneDocument.buildGeneNameTrie()	Builds an instance of AhoCorasickOptimized from the currently selected genes.
AhoCorasickOptimized	GeneDocument.getGeneNameDictionary()