Package de.julielab.genemapper.uima

Class TaxIdIntegratedTextWriter

java.lang.Object

org.apache.uima.analysis_component.AnalysisComponent_ImplBase

org.apache.uima.analysis_component.Annotator_ImplBase

org.apache.uima.analysis_component.JCasAnnotator_ImplBase

de.julielab.genemapper.uima.TaxIdIntegratedTextWriter

All Implemented Interfaces:

org.apache.uima.analysis_component.AnalysisComponent

public class TaxIdIntegratedTextWriter
extends org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Field Summary

Fields

Modifier and Type	Field	Description
static String	PARAM_BASE_PATH
static String	PARAM_LEMMAS
static String	PARAM_LOWERCASING
static String	PARAM_MODE
static String	PARAM_TOKENIZATION

Constructor Summary

Constructors

Constructor	Description
TaxIdIntegratedTextWriter()

Method Summary

Modifier and Type	Method	Description
void	collectionProcessComplete()
void	initialize(org.apache.uima.UimaContext aContext)
void	process(org.apache.uima.jcas.JCas jCas)
void	writeUntokenizedText(org.apache.uima.jcas.JCas jCas, String docText, StringBuilder sb)

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase

getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

batchProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

PARAM_BASE_PATH

public static final String PARAM_BASE_PATH

See Also:

Constant Field Values

PARAM_MODE

public static final String PARAM_MODE

See Also:

Constant Field Values

PARAM_TOKENIZATION

public static final String PARAM_TOKENIZATION

See Also:

Constant Field Values

PARAM_LEMMAS

public static final String PARAM_LEMMAS

See Also:

Constant Field Values

PARAM_LOWERCASING

public static final String PARAM_LOWERCASING

See Also:

Constant Field Values

Constructor Detail

TaxIdIntegratedTextWriter

public TaxIdIntegratedTextWriter()

Method Detail

initialize

public void initialize(org.apache.uima.UimaContext aContext)
                throws org.apache.uima.resource.ResourceInitializationException

Specified by:

initialize in interface org.apache.uima.analysis_component.AnalysisComponent

Overrides:

initialize in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

Throws:

org.apache.uima.resource.ResourceInitializationException

process

public void process(org.apache.uima.jcas.JCas jCas)
             throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException

writeUntokenizedText

public void writeUntokenizedText(org.apache.uima.jcas.JCas jCas,
                                 String docText,
                                 StringBuilder sb)

collectionProcessComplete

public void collectionProcessComplete()
                               throws org.apache.uima.analysis_engine.AnalysisEngineProcessException

Specified by:

collectionProcessComplete in interface org.apache.uima.analysis_component.AnalysisComponent

Overrides:

collectionProcessComplete in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase

Throws:

org.apache.uima.analysis_engine.AnalysisEngineProcessException