GeneSynonymEmbeddingCentroidWriter (Gene ID Mapper 2.5.0 API)

java.lang.Object
- org.apache.uima.analysis_component.AnalysisComponent_ImplBase
- - org.apache.uima.analysis_component.Annotator_ImplBase
  - - org.apache.uima.analysis_component.JCasAnnotator_ImplBase
    - - de.julielab.genemapper.uima.GeneSynonymEmbeddingCentroidWriter

All Implemented Interfaces:: org.apache.uima.analysis_component.AnalysisComponent

public class GeneSynonymEmbeddingCentroidWriter
extends org.apache.uima.analysis_component.JCasAnnotator_ImplBase

Field Summary

Fields
Modifier and Type Field Description

static String PARAM_DB_DIR

Constructor Summary

Constructors
Constructor Description

GeneSynonymEmbeddingCentroidWriter()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`collectionProcessComplete()`
`void`	`initialize(org.apache.uima.UimaContext aContext)`
`void`	`process(org.apache.uima.jcas.JCas jCas)`

Methods inherited from class org.apache.uima.analysis_component.JCasAnnotator_ImplBase
getRequiredCasInterface, process

Methods inherited from class org.apache.uima.analysis_component.Annotator_ImplBase
getCasInstancesRequired, hasNext, next

Methods inherited from class org.apache.uima.analysis_component.AnalysisComponent_ImplBase
batchProcessComplete, destroy, getContext, getResultSpecification, reconfigure, setResultSpecification

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

- Field Detail
  - PARAM_DB_DIR
```
public static final String PARAM_DB_DIR
```
    See Also:
    
    Constant Field Values
- Constructor Detail
  - GeneSynonymEmbeddingCentroidWriter
```
public GeneSynonymEmbeddingCentroidWriter()
```
- Method Detail
  - initialize
```
public void initialize(org.apache.uima.UimaContext aContext)
                throws org.apache.uima.resource.ResourceInitializationException
```
    Specified by:
    
    initialize in interface org.apache.uima.analysis_component.AnalysisComponent
    
    Overrides:
    
    initialize in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase
    
    Throws:
    
    org.apache.uima.resource.ResourceInitializationException
  - collectionProcessComplete
```
public void collectionProcessComplete()
                               throws org.apache.uima.analysis_engine.AnalysisEngineProcessException
```
    Specified by:
    
    collectionProcessComplete in interface org.apache.uima.analysis_component.AnalysisComponent
    
    Overrides:
    
    collectionProcessComplete in class org.apache.uima.analysis_component.AnalysisComponent_ImplBase
    
    Throws:
    
    org.apache.uima.analysis_engine.AnalysisEngineProcessException
  - process
```
public void process(org.apache.uima.jcas.JCas jCas)
```
    Specified by:
    
    process in class org.apache.uima.analysis_component.JCasAnnotator_ImplBase