Package de.julielab.genemapper.mappingcores.quercus

Class BioThesaurusFilterDisambiguationStep

java.lang.Object

de.julielab.genemapper.mappingcores.quercus.BioThesaurusFilterDisambiguationStep

All Implemented Interfaces:

QuercusDisambiguationStep

public class BioThesaurusFilterDisambiguationStep
extends Object
implements QuercusDisambiguationStep

Removes IDs for which the respective candidate synonym stems from the BioThesaurus as long as other options are available.

Constructor Summary

Constructors

Constructor	Description
BioThesaurusFilterDisambiguationStep()

Method Summary

Modifier and Type	Method	Description
void	disambiguate(de.julielab.geneexpbase.genemodel.GeneMention gm, de.julielab.geneexpbase.candidateretrieval.SynHit candidate)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BioThesaurusFilterDisambiguationStep

public BioThesaurusFilterDisambiguationStep()

Method Detail

disambiguate

public void disambiguate(de.julielab.geneexpbase.genemodel.GeneMention gm,
                         de.julielab.geneexpbase.candidateretrieval.SynHit candidate)

Specified by:

disambiguate in interface QuercusDisambiguationStep