Package de.julielab.genemapper.evaluation

Class GeneIdCorrectnessRenderer

java.lang.Object

de.julielab.genemapper.evaluation.GeneIdCorrectnessRenderer

public class GeneIdCorrectnessRenderer
extends Object

Constructor Summary

Constructors

Constructor	Description
GeneIdCorrectnessRenderer()

Method Summary

Modifier and Type	Method	Description
static String	renderCorrectGeneSetMention(de.julielab.geneexpbase.genemodel.GeneMention gm, String goldId)
static String	renderCorrectIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm)
static String	renderCorrectRejection(de.julielab.geneexpbase.genemodel.GeneMention gm)
static String	renderIncorrectRejection(de.julielab.geneexpbase.genemodel.GeneMention gm)
static String	renderMissedRejection(de.julielab.geneexpbase.genemodel.GeneMention gm)
static String	renderNoCorrectCandidateIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm)
static String	renderNoCorrectMentionGeneSet(de.julielab.geneexpbase.genemodel.GeneMention gm, String goldId)
static String	renderWrongGeneSetMention(de.julielab.geneexpbase.genemodel.GeneMention gm, String goldId)
static String	renderWrongIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm)
static String	renderWrongIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm, de.julielab.geneexpbase.candidateretrieval.CandidateRetrieval candidateRetrieval, de.julielab.geneexpbase.candidateretrieval.QueryGenerator queryGenerator)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

GeneIdCorrectnessRenderer

public GeneIdCorrectnessRenderer()

Method Detail

renderCorrectIdGeneMention

public static String renderCorrectIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm)

renderCorrectGeneSetMention

public static String renderCorrectGeneSetMention(de.julielab.geneexpbase.genemodel.GeneMention gm,
                                                 String goldId)

renderCorrectRejection

public static String renderCorrectRejection(de.julielab.geneexpbase.genemodel.GeneMention gm)

renderIncorrectRejection

public static String renderIncorrectRejection(de.julielab.geneexpbase.genemodel.GeneMention gm)

renderMissedRejection

public static String renderMissedRejection(de.julielab.geneexpbase.genemodel.GeneMention gm)

renderWrongGeneSetMention

public static String renderWrongGeneSetMention(de.julielab.geneexpbase.genemodel.GeneMention gm,
                                               String goldId)

renderWrongIdGeneMention

public static String renderWrongIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm,
                                              de.julielab.geneexpbase.candidateretrieval.CandidateRetrieval candidateRetrieval,
                                              de.julielab.geneexpbase.candidateretrieval.QueryGenerator queryGenerator)

renderWrongIdGeneMention

public static String renderWrongIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm)

renderNoCorrectCandidateIdGeneMention

public static String renderNoCorrectCandidateIdGeneMention(de.julielab.geneexpbase.genemodel.GeneMention gm)

renderNoCorrectMentionGeneSet

public static String renderNoCorrectMentionGeneSet(de.julielab.geneexpbase.genemodel.GeneMention gm,
                                                   String goldId)