A B C D E F G H I J K L M N O P Q R S T U V W X

A

abbrChecker - Variable in class dragon.nlp.extract.AbstractTermExtractor

Abbreviation - Class in dragon.nlp.extract

Checking abbreviation for associated terms

Abbreviation() - Constructor for class dragon.nlp.extract.Abbreviation

abbreviation_enabled - Variable in class dragon.nlp.extract.AbstractTermExtractor

AbsoluteDiscountSmoother - Class in dragon.ir.search.smooth

Absolute Discount Smoother

AbsoluteDiscountSmoother(IRCollection, double) - Constructor for class dragon.ir.search.smooth.AbsoluteDiscountSmoother

ABSTRACT - Static variable in class dragon.nlp.Document

AbstractCell - Class in dragon.matrix

Implements basic functions of interface--Cell such as resetting and comparing cell objects

AbstractCell() - Constructor for class dragon.matrix.AbstractCell

AbstractClassifier - Class in dragon.ir.classification

Basic function class for classifying

AbstractClassifier(IndexReader) - Constructor for class dragon.ir.classification.AbstractClassifier

AbstractClassifier(SparseMatrix) - Constructor for class dragon.ir.classification.AbstractClassifier

AbstractClassifier() - Constructor for class dragon.ir.classification.AbstractClassifier

AbstractClustering - Class in dragon.ir.clustering

Abstract class for document clustering

AbstractClustering(IndexReader) - Constructor for class dragon.ir.clustering.AbstractClustering

AbstractClusterModel - Class in dragon.ir.clustering.clustermodel

Abstract cluster for modeled clustering result

AbstractClusterModel(int) - Constructor for class dragon.ir.clustering.clustermodel.AbstractClusterModel

AbstractCodeMatrix - Class in dragon.ir.classification.multiclass

Abstract Code Matrix

AbstractCodeMatrix(int) - Constructor for class dragon.ir.classification.multiclass.AbstractCodeMatrix

AbstractConceptExtractor - Class in dragon.nlp.extract

Abstract class for concept extraction which is the super class of AbstractPhraseExtractor, AbstractTermExtractor, AbstractTokenExtrator, and AbstractTripleExtractor

AbstractConceptExtractor() - Constructor for class dragon.nlp.extract.AbstractConceptExtractor

AbstractCRF - Class in dragon.ml.seqmodel.crf

Abstract class for conditional random field

AbstractCRF(ModelGraph, FeatureGenerator) - Constructor for class dragon.ml.seqmodel.crf.AbstractCRF

AbstractDenseMatrix - Class in dragon.matrix

Implements basic functions of interface--DenseMatrix and extends class AbstractMatrix

AbstractDenseMatrix(int, int, int) - Constructor for class dragon.matrix.AbstractDenseMatrix

AbstractDocDistance - Class in dragon.ir.clustering.docdistance

Abstract Documennt Distance Measure

AbstractDocDistance(SparseMatrix) - Constructor for class dragon.ir.clustering.docdistance.AbstractDocDistance

AbstractDualConceptExtractor - Class in dragon.nlp.extract

Dual concept extractor for dual indexing

AbstractDualConceptExtractor() - Constructor for class dragon.nlp.extract.AbstractDualConceptExtractor

AbstractEvaluator - Class in dragon.ml.seqmodel.evaluate

Abstract class of evaluation

AbstractEvaluator() - Constructor for class dragon.ml.seqmodel.evaluate.AbstractEvaluator

AbstractExpression - Class in dragon.ir.query

Abstract class for query expression

AbstractExpression() - Constructor for class dragon.ir.query.AbstractExpression

AbstractFactorization - Class in dragon.matrix.factorize

Abstract class for matrix factorization

AbstractFactorization() - Constructor for class dragon.matrix.factorize.AbstractFactorization

AbstractFeatureDictionary - Class in dragon.ml.seqmodel.feature

Abstract class for feature dictionary

AbstractFeatureDictionary(int) - Constructor for class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

AbstractFeatureFilter - Class in dragon.ir.clustering.featurefilter

Title:

AbstractFeatureFilter() - Constructor for class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

AbstractFeatureSelector - Class in dragon.ir.classification.featureselection

Abstract function class for feature selection

AbstractFeatureSelector() - Constructor for class dragon.ir.classification.featureselection.AbstractFeatureSelector

AbstractFeatureType - Class in dragon.ml.seqmodel.feature

Abstract class for feature type

AbstractFeatureType(boolean) - Constructor for class dragon.ml.seqmodel.feature.AbstractFeatureType

AbstractFeatureTypeWrapper - Class in dragon.ml.seqmodel.feature

Abstract class for feature type wrapper

AbstractFeatureTypeWrapper(FeatureType) - Constructor for class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

AbstractFeedback - Class in dragon.ir.search.feedback

Abstract Feedback

AbstractFeedback(Searcher, int, double) - Constructor for class dragon.ir.search.feedback.AbstractFeedback

AbstractFlatSparseMatrix - Class in dragon.matrix

Abstract flat sparse matrix handles sparse matrix smaller than super sparse matrix while adding options for read and store matrix data to disk either in text or binary format

AbstractFlatSparseMatrix(boolean, boolean, int) - Constructor for class dragon.matrix.AbstractFlatSparseMatrix

AbstractGiantSparseMatrix - Class in dragon.matrix

The abstract sparse matrix for handling extreme large sparse matrirwhich will write matrix data to disk whenever it's over fulsh interval by default 1000,000 and superior to AbstractSuperSparseMatrix, however it's lack of some basic matrix operation functions such as getNonZeroColumnInRow privided by AbstractSuperSparseMatrix because it focuses on storing and loading matrix to disk efficiently

AbstractGiantSparseMatrix(String, String, int) - Constructor for class dragon.matrix.AbstractGiantSparseMatrix

AbstractGiantSparseMatrix(String, String, int, boolean, boolean) - Constructor for class dragon.matrix.AbstractGiantSparseMatrix

AbstractIndexer - Class in dragon.ir.index

AbstractIndexer implements basic functions of interface Indexer such as building index for an article and options for section index and relation index

AbstractIndexer(boolean) - Constructor for class dragon.ir.index.AbstractIndexer

AbstractIndexReader - Class in dragon.ir.index

AbstractIndexReader implements functions defined in interface IndexReader such as getting termdoc and docterm matrix, getting termkey and dockey, getting termindex and docindex, getting all the indexed terms for a given document, getting all the indexed documents for a given term ...

AbstractIndexReader(boolean) - Constructor for class dragon.ir.index.AbstractIndexReader

AbstractIndexReader(boolean, CollectionReader) - Constructor for class dragon.ir.index.AbstractIndexReader

AbstractIndexWriteController - Class in dragon.ir.index

AbstractIndexWriteController implements basics functions including generating IRTermList, IRRelationList for the useage of later processing.

AbstractIndexWriteController(boolean, boolean) - Constructor for class dragon.ir.index.AbstractIndexWriteController

AbstractIndexWriter - Class in dragon.ir.index

The class implements two methods writing termdoc and docterm matrix to disk with options of term based, relation based or both

AbstractIndexWriter(boolean) - Constructor for class dragon.ir.index.AbstractIndexWriter

AbstractIRQuery - Class in dragon.ir.query

Abstract class of IR query

AbstractIRQuery() - Constructor for class dragon.ir.query.AbstractIRQuery

AbstractMatrix - Class in dragon.matrix

Abstract Matrix implements basic functions such as getting base row, getting base column and so on.

AbstractMatrix() - Constructor for class dragon.matrix.AbstractMatrix

AbstractMixtureWeightEM - Class in dragon.ir.search.smooth

Abstract EM Algorithm for Mixture Weights Estimation

AbstractMixtureWeightEM(IndexReader, int, int, boolean) - Constructor for class dragon.ir.search.smooth.AbstractMixtureWeightEM

AbstractModel - Class in dragon.ir.topicmodel

Abstract model implements basic functions for topic model which can be inherited by other classes

AbstractModel() - Constructor for class dragon.ir.topicmodel.AbstractModel

AbstractModel - Class in dragon.ml.seqmodel.model

Abstract class for model graph

AbstractModel(int, String) - Constructor for class dragon.ml.seqmodel.model.AbstractModel

AbstractOntology - Class in dragon.nlp.ontology

The class implements all the basic functions related with ontology

AbstractOntology(Lemmatiser) - Constructor for class dragon.nlp.ontology.AbstractOntology

AbstractPhraseExtractor - Class in dragon.nlp.extract

Abstract class for phrase extraction

AbstractPhraseExtractor(Vocabulary, Tagger, Lemmatiser) - Constructor for class dragon.nlp.extract.AbstractPhraseExtractor

AbstractPredicate - Class in dragon.ir.query

Abstract class of predicate

AbstractPredicate() - Constructor for class dragon.ir.query.AbstractPredicate

AbstractQE - Class in dragon.ir.search.expand

Abstract Query Expansion

AbstractQE(IndexReader) - Constructor for class dragon.ir.search.expand.AbstractQE

AbstractQuery - Class in dragon.onlinedb

Abstract class for querying articles from a data source

AbstractQuery(int) - Constructor for class dragon.onlinedb.AbstractQuery

AbstractQueryGenerator - Class in dragon.ir.query

Abstract class of query generator which implements function "generate".

AbstractQueryGenerator() - Constructor for class dragon.ir.query.AbstractQueryGenerator

AbstractRow - Class in dragon.matrix

Abstract row class implementing functions of as row related operations

AbstractRow() - Constructor for class dragon.matrix.AbstractRow

AbstractSearchEngine - Class in dragon.onlinedb.searchengine

Abstract Search Engine Query

AbstractSearchEngine(int) - Constructor for class dragon.onlinedb.searchengine.AbstractSearchEngine

AbstractSearcher - Class in dragon.ir.search

Abstract class of Searcher

AbstractSearcher(IndexReader, Smoother) - Constructor for class dragon.ir.search.AbstractSearcher

AbstractSentenceIndexer - Class in dragon.ir.index.sentence

The abstract indexder for sentence level indexing

AbstractSentenceIndexer(DocumentParser) - Constructor for class dragon.ir.index.sentence.AbstractSentenceIndexer

AbstractSentenceSum - Class in dragon.ir.summarize

The class implement basic function of building summary given a sentence set.

AbstractSentenceSum() - Constructor for class dragon.ir.summarize.AbstractSentenceSum

AbstractSequenceIndexer - Class in dragon.ir.index.sequence

The abstract indexer for indexing sequencial data

AbstractSequenceIndexer(ConceptExtractor) - Constructor for class dragon.ir.index.sequence.AbstractSequenceIndexer

AbstractSequenceIndexReader - Class in dragon.ir.index.sequence

The abstract index reader for sequencial data

AbstractSequenceIndexReader() - Constructor for class dragon.ir.index.sequence.AbstractSequenceIndexReader

AbstractSequenceIndexWriter - Class in dragon.ir.index.sequence

The abstract index writer for sequencial data

AbstractSequenceIndexWriter() - Constructor for class dragon.ir.index.sequence.AbstractSequenceIndexWriter

AbstractSmoother - Class in dragon.ir.search.smooth

Abstract Smoother

AbstractSmoother() - Constructor for class dragon.ir.search.smooth.AbstractSmoother

AbstractSparseMatrix - Class in dragon.matrix

Abstract Sparse matrix implements the interface of sparse matrix which can be called by any data type's sparse matrix such as double and integer

AbstractSparseMatrix(boolean, boolean, int) - Constructor for class dragon.matrix.AbstractSparseMatrix

AbstractStructureSum - Class in dragon.ir.summarize

Abstract class of structure summarization given a document set

AbstractStructureSum(IndexReader) - Constructor for class dragon.ir.summarize.AbstractStructureSum

AbstractSuperSparseMatrix - Class in dragon.matrix

Abstract super sparse matrix is designed for large sparse matrix which first caches data and then processes data and write data to disk when it's over flush interval

AbstractSuperSparseMatrix(String, String, int, boolean, boolean) - Constructor for class dragon.matrix.AbstractSuperSparseMatrix

AbstractSuperSparseMatrix(String, String, int) - Constructor for class dragon.matrix.AbstractSuperSparseMatrix

AbstractTagger - Class in dragon.nlp.tool

The class provides basic methods for tagging a text

AbstractTagger() - Constructor for class dragon.nlp.tool.AbstractTagger

AbstractTermExtractor - Class in dragon.nlp.extract

Abstract class for UMLS term (CUI) extraction

AbstractTermExtractor(Ontology, Tagger, Lemmatiser) - Constructor for class dragon.nlp.extract.AbstractTermExtractor

AbstractTokenExtractor - Class in dragon.nlp.extract

Abstract class for token extraction

AbstractTokenExtractor(Lemmatiser) - Constructor for class dragon.nlp.extract.AbstractTokenExtractor

AbstractTopicModel - Class in dragon.ir.topicmodel

Abstract class of topic model

AbstractTopicModel(IndexReader) - Constructor for class dragon.ir.topicmodel.AbstractTopicModel

AbstractTopicReader - Class in dragon.onlinedb.trec

Abstract class for TREC topic reading

AbstractTopicReader(String) - Constructor for class dragon.onlinedb.trec.AbstractTopicReader

AbstractTrainer - Class in dragon.ml.seqmodel.crf

Abstract class for training conditional random field

AbstractTrainer(ModelGraph, FeatureGenerator) - Constructor for class dragon.ml.seqmodel.crf.AbstractTrainer

AbstractTripleExtractor - Class in dragon.nlp.extract

Abstract class for triple extraction

AbstractTripleExtractor(ConceptExtractor) - Constructor for class dragon.nlp.extract.AbstractTripleExtractor

AbstractTwoDimensionModel - Class in dragon.ir.topicmodel

Abstract class of two dimensional topic model

AbstractTwoDimensionModel(IndexReader, IndexReader) - Constructor for class dragon.ir.topicmodel.AbstractTwoDimensionModel

AbstractVocabulary - Class in dragon.nlp.ontology

The class implements all the basic functions related with vocabulary

AbstractVocabulary(String) - Constructor for class dragon.nlp.ontology.AbstractVocabulary

AbstractVocabulary(String, Lemmatiser) - Constructor for class dragon.nlp.ontology.AbstractVocabulary

abt - Variable in class dragon.onlinedb.BasicArticle

accept(File, String) - Method in class dragon.util.WildCardFilter

add(IRDoc) - Method in class dragon.ir.index.BasicIRDocIndexList

add(IRRelation) - Method in class dragon.ir.index.BasicIRRelationIndexList

add(IRTerm) - Method in class dragon.ir.index.BasicIRTermIndexList

add(IRDoc) - Method in interface dragon.ir.index.IRDocIndexList

Adds an IRDoc object to the index list

add(IRRelation) - Method in interface dragon.ir.index.IRRelationIndexList

Adds a relation to the list.

add(IRTerm) - Method in interface dragon.ir.index.IRTermIndexList

Adds the term to the list

add(IRDoc) - Method in class dragon.ir.index.OnlineIRDocIndexList

add(IRRelation) - Method in class dragon.ir.index.OnlineIRRelationIndexList

add(IRTerm) - Method in class dragon.ir.index.OnlineIRTermIndexList

add(String, String) - Method in class dragon.ir.index.sentence.OnlineSentenceBase

add(ArrayList) - Method in class dragon.ir.kngbase.HALSpace

add(CollectionReader) - Method in class dragon.ir.kngbase.HALSpace

add(Predicate) - Method in class dragon.ir.query.RelSimpleQuery

add(Cell) - Method in class dragon.matrix.AbstractFlatSparseMatrix

add(Cell) - Method in class dragon.matrix.AbstractGiantSparseMatrix

add(Cell) - Method in class dragon.matrix.AbstractSuperSparseMatrix

add(int, int, double) - Method in interface dragon.matrix.DoubleDenseMatrix

add(int, int, double) - Method in class dragon.matrix.DoubleFlatDenseMatrix

add(int, int, double) - Method in class dragon.matrix.DoubleFlatSparseMatrix

add(int, int, double) - Method in class dragon.matrix.DoubleGiantSparseMatrix

add(int, int, double) - Method in interface dragon.matrix.DoubleSparseMatrix

It is equal to create a double cell and then add the cell to the sparse matrix.

add(int, int, double) - Method in class dragon.matrix.DoubleSuperSparseMatrix

add(int, int, int) - Method in interface dragon.matrix.IntDenseMatrix

add(int, int, int) - Method in class dragon.matrix.IntFlatDenseMatrix

add(int, int, int) - Method in class dragon.matrix.IntFlatSparseMatrix

add(int, int, int) - Method in class dragon.matrix.IntGiantSparseMatrix

add(int, int, int) - Method in interface dragon.matrix.IntSparseMatrix

It is equal to create an integer cell and then add the cell to the sparse matrix.

add(int, int, int) - Method in class dragon.matrix.IntSuperSparseMatrix

add(Cell) - Method in interface dragon.matrix.SparseMatrix

Add a cell to the sparse matrix.

add(SparseMatrix) - Method in class dragon.matrix.SparseMatrixFactory

add(DoubleVector) - Method in class dragon.matrix.vector.DoubleVector

add(int, double) - Method in class dragon.matrix.vector.DoubleVector

add(IntVector) - Method in class dragon.matrix.vector.IntVector

add(int, int) - Method in class dragon.matrix.vector.IntVector

add(BasicToken) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

add(DataSequence) - Method in class dragon.ml.seqmodel.data.BasicDataset

add(FeatureIdentifier) - Method in class dragon.ml.seqmodel.feature.FeatureMap

add(String, String[]) - Method in class dragon.nlp.ontology.umls.UmlsCUIList

add(String) - Method in class dragon.nlp.SimpleElementList

add(SimpleElement) - Method in class dragon.nlp.SimpleElementList

add(int, int) - Method in class dragon.nlp.SimplePairList

add(char) - Method in class dragon.nlp.tool.PorterStemmer

Add a character to the word being stemmed.

add(char[], int) - Method in class dragon.nlp.tool.PorterStemmer

Adds wLen characters to the word being stemmed contained in a portion of a char[] array.

add(WordPairStat) - Method in class dragon.nlp.tool.xtract.WordPairStatList

add(String, long) - Method in class dragon.onlinedb.BasicArticleIndex

add(String, String, long, int) - Method in class dragon.onlinedb.BasicArticleIndex

add(Article) - Method in class dragon.onlinedb.BasicCollectionWriter

add(Article) - Method in interface dragon.onlinedb.CollectionWriter

Adds an article to the collection

add(String) - Method in class dragon.util.SimpleDictionary

add(Object) - Method in class dragon.util.SortedArray

addArticle(Article) - Method in class dragon.onlinedb.ArrayCollectionReader

addArticles(ArticleQuery) - Method in class dragon.onlinedb.BasicCollectionPreparer

addArticles(String) - Method in class dragon.onlinedb.BasicCollectionPreparer

addArticles(String[]) - Method in class dragon.onlinedb.BasicCollectionPreparer

addArticles(ArticleQuery, int) - Method in class dragon.onlinedb.BasicCollectionPreparer

addArticles(ArticleQuery) - Method in interface dragon.onlinedb.CollectionPreparer

Adds all articles represented by the given query.

addArticles(String) - Method in interface dragon.onlinedb.CollectionPreparer

Adds all articles represented by all queries listed in the given file.

addArticles(String[]) - Method in interface dragon.onlinedb.CollectionPreparer

Adds all articles represented by all queries in the given array.

addAttribute(Term) - Method in class dragon.nlp.Term

addCount(int) - Method in class dragon.nlp.Counter

addDoc(IRDoc) - Method in class dragon.ir.classification.DocClass

addDoc(int, IRDoc) - Method in class dragon.ir.classification.DocClassSet

addDoc(IRDoc) - Method in class dragon.ir.clustering.DocCluster

addDoc(int, IRDoc) - Method in class dragon.ir.clustering.DocClusterSet

addDocFrequency(int) - Method in class dragon.ir.index.IRRelation

addDocFrequency(int) - Method in class dragon.ir.index.IRTerm

addDocNum(int) - Method in class dragon.ir.index.IRCollection

addExcludedSTY(String) - Method in class dragon.nlp.extract.BasicConceptFilter

addFeature(Object, int) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

addFeature(Object, int) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

addFeature(Object, int) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

addFeatureType(FeatureType) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

addFeatureType(FeatureType) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Adds wanted feature type to the feature generator

addFrequency(int) - Method in class dragon.ir.index.IRRelation

addFrequency(int) - Method in class dragon.ir.index.IRTerm

addFrequency(int) - Method in interface dragon.nlp.Concept

addFrequency(int) - Method in class dragon.nlp.ontology.mesh.MeshNode

addFrequency(int) - Method in class dragon.nlp.Phrase

addFrequency(int) - Method in class dragon.nlp.Term

addFrequency(int) - Method in class dragon.nlp.Token

addFrequency(int, int) - Method in class dragon.nlp.tool.xtract.WordPairStat

addFrequency(int) - Method in class dragon.nlp.Triple

addFrequency(int) - Method in class dragon.nlp.Word

addListedArticles(String) - Method in class dragon.onlinedb.BasicCollectionPreparer

addListedArticles(String) - Method in interface dragon.onlinedb.CollectionPreparer

Adds a set of articles whose keys are listed in the given file.

addMultiExcludedSTY(String) - Method in class dragon.nlp.extract.BasicConceptFilter

addMultiSupportedSTY(String) - Method in class dragon.nlp.extract.BasicConceptFilter

addParagraph(Paragraph) - Method in class dragon.nlp.Document

addPhrase(Word, Word, boolean, boolean, ArrayList) - Method in class dragon.nlp.extract.BasicPhraseExtractor

addRawSentence(Sentence) - Method in class dragon.ir.index.sentence.BasicSentenceWriteController

addRawSentence(Sentence) - Method in class dragon.ir.index.sentence.OnlineSentenceWriteController

addRelationCount(int) - Method in class dragon.ir.index.IRCollection

addSection(IRSection) - Method in class dragon.ir.index.AbstractIndexer

addSection(IRSection) - Method in class dragon.ir.index.BasicIndexWriteController

addSection(IRSection) - Method in class dragon.ir.query.QueryWriter

addSentence(Sentence) - Method in class dragon.nlp.Paragraph

addSentence(Sentence) - Method in class dragon.nlp.tool.xtract.SentenceBase

addSequence(int, int[]) - Method in class dragon.ir.index.sequence.OnlineSequenceBase

addSequence(int, int[]) - Method in class dragon.ir.index.sequence.SequenceFileWriter

addSequence(int, int[]) - Method in interface dragon.ir.index.sequence.SequenceWriter

addSTY(String) - Method in class dragon.nlp.ontology.umls.UmlsCUI

addSupportedSTY(String) - Method in class dragon.nlp.extract.BasicConceptFilter

addTermCount(int) - Method in class dragon.ir.index.IRCollection

addText(TextUnit) - Method in class dragon.ir.summarize.TopicSummary

addToken(Token) - Method in class dragon.nlp.ontology.umls.UmlsTokenList

addWord(Word) - Method in class dragon.nlp.Sentence

advance() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

advance(boolean) - Method in class dragon.ml.seqmodel.feature.FeatureTypeWindow

AllPairCodeMatrix - Class in dragon.ir.classification.multiclass

Pairwise Code Matrix

AllPairCodeMatrix() - Constructor for class dragon.ir.classification.multiclass.AllPairCodeMatrix

AllPairCodeMatrix(int) - Constructor for class dragon.ir.classification.multiclass.AllPairCodeMatrix

allTotal - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

AlphabetaComparator - Class in dragon.nlp.compare

Compare two objects alphabetically

AlphabetaComparator() - Constructor for class dragon.nlp.compare.AlphabetaComparator

AlphabetaComparator(boolean) - Constructor for class dragon.nlp.compare.AlphabetaComparator

AmazonCatalogQuery - Class in dragon.onlinedb.amazon

Amazon catalog query

AmazonCatalogQuery(String) - Constructor for class dragon.onlinedb.amazon.AmazonCatalogQuery

AmazonCatalogQuery() - Constructor for class dragon.onlinedb.amazon.AmazonCatalogQuery

AmazonReviewQuery - Class in dragon.onlinedb.amazon

Amazon reveiw query

AmazonReviewQuery(String) - Constructor for class dragon.onlinedb.amazon.AmazonReviewQuery

AmazonReviewQuery() - Constructor for class dragon.onlinedb.amazon.AmazonReviewQuery

Annie - Class in dragon.nlp.tool

Annie adopted from gate

Annie() - Constructor for class dragon.nlp.tool.Annie

Annie(String) - Constructor for class dragon.nlp.tool.Annie

annotate(String) - Method in class dragon.nlp.tool.Annie

annotate(String) - Method in interface dragon.nlp.tool.NER

The format of an annotated text is XML.

annotatedLabels - Variable in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

annotatedLabels() - Method in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

annotatedLabels() - Method in interface dragon.ml.seqmodel.evaluate.Evaluator

arrArticle - Variable in class dragon.onlinedb.amazon.AmazonCatalogQuery

arrArticle - Variable in class dragon.onlinedb.amazon.AmazonReviewQuery

ArrayCollectionReader - Class in dragon.onlinedb

Collection reader for reading multiple collection

ArrayCollectionReader() - Constructor for class dragon.onlinedb.ArrayCollectionReader

arrCachedRow - Variable in class dragon.matrix.AbstractSuperSparseMatrix

arrCommonThemeProb - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

arrDocTheme - Variable in class dragon.ir.topicmodel.AbstractTopicModel

arrDocTheme - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

arrDocView - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

arrLabel - Variable in class dragon.ir.classification.AbstractClassifier

arrPairSentLeftMatrix - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

arrPairSentLeftMatrix - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

arrPairSentRightMatrix - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

arrPairSentRightMatrix - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

arrPaper - Variable in class dragon.onlinedb.citeulike.CiteULikeTagQuery

arrPaper - Variable in class dragon.onlinedb.pubmed.PubMedQuery

arrRowLoadFactor - Variable in class dragon.matrix.AbstractSuperSparseMatrix

arrRowPosInCache - Variable in class dragon.matrix.AbstractSuperSparseMatrix

arrRowPosInFile - Variable in class dragon.matrix.AbstractSuperSparseMatrix

arrRowStart - Variable in class dragon.matrix.AbstractSuperSparseMatrix

arrSections - Variable in class dragon.ir.index.AbstractIndexer

arrSections - Variable in class dragon.ir.query.BasicQueryGenerator

arrThemeProb - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

arrThemeTerm - Variable in class dragon.ir.topicmodel.AbstractTopicModel

arrTopicReader - Variable in class dragon.ir.topicmodel.CrossMixtureModel

arrUrl - Variable in class dragon.onlinedb.searchengine.AbstractSearchEngine

arrViewProb - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

Article - Interface in dragon.onlinedb

Interface of Article which is the unit of collections

articleIndex - Variable in class dragon.onlinedb.BasicCollectionWriter

articleNum - Variable in class dragon.onlinedb.AbstractQuery

ArticleParser - Interface in dragon.onlinedb

Interface of Article Parser

ArticleQuery - Interface in dragon.onlinedb

An interface for online document retrieval

AspectModel - Class in dragon.ir.topicmodel

Aspect topic model

AspectModel(IndexReader) - Constructor for class dragon.ir.topicmodel.AspectModel

assemble(Article) - Method in interface dragon.onlinedb.ArticleParser

Assemble an article into a sequence of text which could be saved in files for future use.

assemble(Article) - Method in class dragon.onlinedb.BasicArticleParser

assemble(Article) - Method in class dragon.onlinedb.isi.ISIArticleParser

assemble(Article) - Method in class dragon.onlinedb.SimpleArticleParser

assemble(Article) - Method in class dragon.onlinedb.trec.DUC2004HTArticleParser

assemble(Article) - Method in class dragon.onlinedb.trec.DUC2004MTArticleParser

assemble(Article) - Method in class dragon.onlinedb.trec.MedArticleParser

assemble(Article) - Method in class dragon.onlinedb.trec.SgmArticleParser

assign(double) - Method in interface dragon.matrix.DoubleDenseMatrix

Assign the same given score to all cells of the matrix

assign(double) - Method in class dragon.matrix.DoubleFlatDenseMatrix

assign(int) - Method in interface dragon.matrix.IntDenseMatrix

Assign the same given score to all cells of the matrix

assign(int) - Method in class dragon.matrix.IntFlatDenseMatrix

assign(double) - Method in class dragon.matrix.vector.DoubleVector

assign(DoubleVector) - Method in class dragon.matrix.vector.DoubleVector

assign(int) - Method in class dragon.matrix.vector.IntVector

assign(IntVector) - Method in class dragon.matrix.vector.IntVector

attrChecker - Variable in class dragon.nlp.extract.AbstractTermExtractor

attributeCheck_enabled - Variable in class dragon.nlp.extract.AbstractTermExtractor

AttributeChecker - Class in dragon.nlp.extract

Checking whetherterms are of attribute type

AttributeChecker(String) - Constructor for class dragon.nlp.extract.AttributeChecker

available() - Method in class dragon.util.FastFileInputStream

average(double[]) - Static method in class dragon.util.MathUtil

average(int[]) - Static method in class dragon.util.MathUtil

AVERAGE_LINKAGE - Static variable in class dragon.ir.clustering.HierClustering

B

BasicArticle - Class in dragon.onlinedb

Basic article implements basic functions related with article operations

BasicArticle(String) - Constructor for class dragon.onlinedb.BasicArticle

BasicArticle() - Constructor for class dragon.onlinedb.BasicArticle

BasicArticleIndex - Class in dragon.onlinedb

Basic class of handling article index information

BasicArticleIndex(String, boolean) - Constructor for class dragon.onlinedb.BasicArticleIndex

BasicArticleKey - Class in dragon.onlinedb

Data structure for article key

BasicArticleKey(String) - Constructor for class dragon.onlinedb.BasicArticleKey

BasicArticleParser - Class in dragon.onlinedb

Basic Parser for parsing and assembling a given article

BasicArticleParser() - Constructor for class dragon.onlinedb.BasicArticleParser

BasicCollectionPreparer - Class in dragon.onlinedb

Basic collection preparer which writes article to disk in "collection" format which can be later processed by BasicIndexer and so on

BasicCollectionPreparer(CollectionWriter, ArticleQuery) - Constructor for class dragon.onlinedb.BasicCollectionPreparer

BasicCollectionReader - Class in dragon.onlinedb

Basic collection reader (supporting class for indexing)

BasicCollectionReader() - Constructor for class dragon.onlinedb.BasicCollectionReader

BasicCollectionReader(String) - Constructor for class dragon.onlinedb.BasicCollectionReader

BasicCollectionReader(String, String) - Constructor for class dragon.onlinedb.BasicCollectionReader

BasicCollectionReader(String, String, ArticleParser) - Constructor for class dragon.onlinedb.BasicCollectionReader

BasicCollectionWriter - Class in dragon.onlinedb

Writing collection to disk

BasicCollectionWriter(String, String, boolean) - Constructor for class dragon.onlinedb.BasicCollectionWriter

BasicConceptFilter - Class in dragon.nlp.extract

Basic Concept Filter

BasicConceptFilter() - Constructor for class dragon.nlp.extract.BasicConceptFilter

BasicConceptFilter(String) - Constructor for class dragon.nlp.extract.BasicConceptFilter

BasicConceptFilter(String, String, String) - Constructor for class dragon.nlp.extract.BasicConceptFilter

BasicConfigureNode - Class in dragon.config

Basic data structure for XML configure node

BasicConfigureNode(String) - Constructor for class dragon.config.BasicConfigureNode

BasicConfigureNode(Node) - Constructor for class dragon.config.BasicConfigureNode

BasicDataSequence - Class in dragon.ml.seqmodel.data

Basic data structure for sequence data

BasicDataSequence() - Constructor for class dragon.ml.seqmodel.data.BasicDataSequence

BasicDataSequence(int) - Constructor for class dragon.ml.seqmodel.data.BasicDataSequence

BasicDataset - Class in dragon.ml.seqmodel.data

Basic data structure of a set of sequence data

BasicDataset(int, int) - Constructor for class dragon.ml.seqmodel.data.BasicDataset

BasicFeature - Class in dragon.ml.seqmodel.feature

Basic data structure for feature data

BasicFeature() - Constructor for class dragon.ml.seqmodel.feature.BasicFeature

BasicFeature(String, int, double) - Constructor for class dragon.ml.seqmodel.feature.BasicFeature

BasicFeature(FeatureIdentifier, int, double) - Constructor for class dragon.ml.seqmodel.feature.BasicFeature

BasicFeature(String, int, int, double) - Constructor for class dragon.ml.seqmodel.feature.BasicFeature

BasicFeature(FeatureIdentifier, int, int, double) - Constructor for class dragon.ml.seqmodel.feature.BasicFeature

BasicFeature(BasicFeature) - Constructor for class dragon.ml.seqmodel.feature.BasicFeature

BasicFeatureGenerator - Class in dragon.ml.seqmodel.feature

The FeatureGenerator is an aggregator over all these different feature types.

BasicFeatureGenerator(ModelGraph) - Constructor for class dragon.ml.seqmodel.feature.BasicFeatureGenerator

BasicFeatureGenerator(ModelGraph, boolean) - Constructor for class dragon.ml.seqmodel.feature.BasicFeatureGenerator

BasicIndexer - Class in dragon.ir.index

BasicIndexer, providing all basic functions for indexing, can be used to index documents directly

BasicIndexer(TripleExtractor, boolean, String) - Constructor for class dragon.ir.index.BasicIndexer

BasicIndexer(TripleExtractor, String, String) - Constructor for class dragon.ir.index.BasicIndexer

BasicIndexer(ConceptExtractor, boolean, String) - Constructor for class dragon.ir.index.BasicIndexer

BasicIndexer(ConceptExtractor, String, String) - Constructor for class dragon.ir.index.BasicIndexer

BasicIndexReader - Class in dragon.ir.index

BasicIndexReader is used to read all the indexing information into memory for a indexed collection

BasicIndexReader(String, boolean) - Constructor for class dragon.ir.index.BasicIndexReader

BasicIndexReader(String, boolean, CollectionReader) - Constructor for class dragon.ir.index.BasicIndexReader

BasicIndexWriteController - Class in dragon.ir.index

This class implements function of writing section index.

BasicIndexWriteController(String, boolean, boolean) - Constructor for class dragon.ir.index.BasicIndexWriteController

BasicIndexWriter - Class in dragon.ir.index

The class is used to initialize and write index to disk

BasicIndexWriter(String, boolean) - Constructor for class dragon.ir.index.BasicIndexWriter

BasicIRDocIndexList - Class in dragon.ir.index

The class is used to write or load the indexing information for a given document or document set

BasicIRDocIndexList(String, boolean) - Constructor for class dragon.ir.index.BasicIRDocIndexList

BasicIRRelationIndexList - Class in dragon.ir.index

The class is used to write or load the relation indexing information for a given IR relation or relation set

BasicIRRelationIndexList(String, boolean) - Constructor for class dragon.ir.index.BasicIRRelationIndexList

BasicIRTermIndexList - Class in dragon.ir.index

The class is used to write or load the relation indexing information for a given IR term or term set

BasicIRTermIndexList(String, boolean) - Constructor for class dragon.ir.index.BasicIRTermIndexList

BasicKMean - Class in dragon.ir.clustering

Basic KMeans clustering

BasicKMean(IndexReader, ClusterModel, int) - Constructor for class dragon.ir.clustering.BasicKMean

BasicKMean(IndexReader, ClusterModel, int, boolean) - Constructor for class dragon.ir.clustering.BasicKMean

BasicKMean(IndexReader, ClusterModel, DocClusterSet) - Constructor for class dragon.ir.clustering.BasicKMean

BasicKnowledgeBase - Class in dragon.ir.kngbase

Basic knowledge base

BasicKnowledgeBase(DoubleSparseMatrix, SimpleElementList, SimpleElementList) - Constructor for class dragon.ir.kngbase.BasicKnowledgeBase

BasicLabelConverter - Class in dragon.ml.seqmodel.data

Basic Label Converter

BasicLabelConverter() - Constructor for class dragon.ml.seqmodel.data.BasicLabelConverter

BasicMeshOntology - Class in dragon.nlp.ontology.mesh

Ontology data structure for MeSH ontology

BasicMeshOntology(Lemmatiser, int) - Constructor for class dragon.nlp.ontology.mesh.BasicMeshOntology

BasicMeshOntology(Lemmatiser, int, String, String) - Constructor for class dragon.nlp.ontology.mesh.BasicMeshOntology

BasicOntology - Class in dragon.nlp.ontology

Basic Ontology can be called directly for basic operations of a given ontology

BasicOntology(String, Lemmatiser) - Constructor for class dragon.nlp.ontology.BasicOntology

BasicPhraseExtractor - Class in dragon.nlp.extract

Phrase extraction

BasicPhraseExtractor(Vocabulary, Lemmatiser, Tagger) - Constructor for class dragon.nlp.extract.BasicPhraseExtractor

BasicPhraseExtractor(Vocabulary, Lemmatiser, Tagger, boolean) - Constructor for class dragon.nlp.extract.BasicPhraseExtractor

BasicQueryGenerator - Class in dragon.ir.query

Basic Query Generator

BasicQueryGenerator(TripleExtractor, boolean) - Constructor for class dragon.ir.query.BasicQueryGenerator

BasicQueryGenerator(ConceptExtractor, boolean) - Constructor for class dragon.ir.query.BasicQueryGenerator

BasicSentenceIndexer - Class in dragon.ir.index.sentence

The basic indexer for sentence level indexing

BasicSentenceIndexer(ConceptExtractor, boolean, String) - Constructor for class dragon.ir.index.sentence.BasicSentenceIndexer

BasicSentenceIndexer(TripleExtractor, boolean, String) - Constructor for class dragon.ir.index.sentence.BasicSentenceIndexer

BasicSentenceIndexReader - Class in dragon.ir.index.sentence

Basic index reader for reading sentence indexing information

BasicSentenceIndexReader(String, boolean) - Constructor for class dragon.ir.index.sentence.BasicSentenceIndexReader

BasicSentenceWriteController - Class in dragon.ir.index.sentence

The basic controller for writting sentence indexing information to disk

BasicSentenceWriteController(String, boolean, boolean) - Constructor for class dragon.ir.index.sentence.BasicSentenceWriteController

BasicSequenceIndexer - Class in dragon.ir.index.sequence

The basic indexer for sequencial data

BasicSequenceIndexer(ConceptExtractor, String) - Constructor for class dragon.ir.index.sequence.BasicSequenceIndexer

BasicSequenceIndexReader - Class in dragon.ir.index.sequence

The basic index reader for sequencial data

BasicSequenceIndexReader(String) - Constructor for class dragon.ir.index.sequence.BasicSequenceIndexReader

BasicSequenceIndexReader(String, CollectionReader) - Constructor for class dragon.ir.index.sequence.BasicSequenceIndexReader

BasicSequenceIndexWriter - Class in dragon.ir.index.sequence

The basic index writer for sequencial data

BasicSequenceIndexWriter(String) - Constructor for class dragon.ir.index.sequence.BasicSequenceIndexWriter

BasicTerm - Class in dragon.nlp.ontology

A light data structure for term of a given ontology

BasicTerm(int, String, String[]) - Constructor for class dragon.nlp.ontology.BasicTerm

BasicTermExtractor - Class in dragon.nlp.extract

Ontological term extraction

BasicTermExtractor(Ontology, Lemmatiser, Tagger) - Constructor for class dragon.nlp.extract.BasicTermExtractor

BasicTermList - Class in dragon.nlp.ontology

List of basic terms in ontology

BasicTermList(String) - Constructor for class dragon.nlp.ontology.BasicTermList

BasicToken - Class in dragon.ml.seqmodel.data

Basic token related with sequence data

BasicToken(String) - Constructor for class dragon.ml.seqmodel.data.BasicToken

BasicToken(String, int) - Constructor for class dragon.ml.seqmodel.data.BasicToken

BasicTokenExtractor - Class in dragon.nlp.extract

Token extraction

BasicTokenExtractor(Lemmatiser) - Constructor for class dragon.nlp.extract.BasicTokenExtractor

BasicTokenExtractor(Lemmatiser, String) - Constructor for class dragon.nlp.extract.BasicTokenExtractor

BasicTripleExtractor - Class in dragon.nlp.extract

Triple Extraction

BasicTripleExtractor(TermExtractor) - Constructor for class dragon.nlp.extract.BasicTripleExtractor

BasicVocabulary - Class in dragon.nlp.ontology

The class can be called directly to support vocabulary operations

BasicVocabulary(String) - Constructor for class dragon.nlp.ontology.BasicVocabulary

BasicVocabulary(String, Lemmatiser) - Constructor for class dragon.nlp.ontology.BasicVocabulary

beta - Variable in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

BibTeXArticle - Class in dragon.onlinedb.bibtex

BibTex Article

BibTeXArticle(String) - Constructor for class dragon.onlinedb.bibtex.BibTeXArticle

binarySearch(Object) - Method in class dragon.util.SortedArray

binarySearch(Object, int) - Method in class dragon.util.SortedArray

binarySearch(Object, int, int) - Method in class dragon.util.SortedArray

binarySearch(List, Object) - Static method in class dragon.util.SortedArray

binarySearch(List, Object, Comparator) - Static method in class dragon.util.SortedArray

binarySearch(List, Object, int, int) - Static method in class dragon.util.SortedArray

binarySearch(List, Object, int, int, Comparator) - Static method in class dragon.util.SortedArray

BisectKMean - Class in dragon.ir.clustering

BisectKMean clustering

BisectKMean(IndexReader, ClusterModel, int) - Constructor for class dragon.ir.clustering.BisectKMean

BisectKMean(IndexReader, ClusterModel, int, boolean) - Constructor for class dragon.ir.clustering.BisectKMean

bkgCoefficient - Variable in class dragon.ir.topicmodel.CrossMixtureModel

bkgCoefficient - Variable in class dragon.ir.topicmodel.SimpleMixtureModel

bkgModel - Variable in class dragon.ir.topicmodel.CrossMixtureModel

bkgModel - Variable in class dragon.ir.topicmodel.SimpleMixtureModel

BODY - Static variable in class dragon.nlp.Document

body - Variable in class dragon.onlinedb.BasicArticle

BoolExpression - Class in dragon.ir.query

Bool query expression

BoolExpression(String[]) - Constructor for class dragon.ir.query.BoolExpression

BoolQualifierPredicate - Class in dragon.ir.query

Bool qualifier predicate

BoolQualifierPredicate(String[]) - Constructor for class dragon.ir.query.BoolQualifierPredicate

BoolRankSearcher - Class in dragon.ir.search

Bool rank searcher

BoolRankSearcher(IndexReader, Smoother) - Constructor for class dragon.ir.search.BoolRankSearcher

BoolRelationPredicate - Class in dragon.ir.query

Bool relation predicate

BoolRelationPredicate(String[]) - Constructor for class dragon.ir.query.BoolRelationPredicate

BoolTermPredicate - Class in dragon.ir.query

Bool term predicate

BoolTermPredicate(String[]) - Constructor for class dragon.ir.query.BoolTermPredicate

br - Variable in class dragon.onlinedb.BasicCollectionReader

breadthFirstSearch(IRQuery) - Method in class dragon.ir.search.FullRankSearcher

BrillTagger - Class in dragon.nlp.tool

Java version of Brill's Part-of-Speech Tagger

BrillTagger() - Constructor for class dragon.nlp.tool.BrillTagger

BrillTagger(String) - Constructor for class dragon.nlp.tool.BrillTagger

browseUrl - Variable in class dragon.onlinedb.amazon.AmazonCatalogQuery

buildIRTerm(SimpleTermPredicate) - Method in class dragon.ir.search.feedback.AbstractFeedback

buildNormalizedTerm(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

buildQuery(SimpleTermPredicate[], SimpleTermPredicate[], double) - Method in class dragon.ir.search.expand.AbstractQE

buildSimpleTermPredicate(int, double) - Method in class dragon.ir.search.expand.AbstractQE

buildSimpleTermPredicate(int, double) - Method in class dragon.ir.search.feedback.AbstractFeedback

buildString(Word, Word, boolean) - Method in class dragon.nlp.ontology.AbstractOntology

buildString(Word, Word, boolean) - Method in class dragon.nlp.ontology.AbstractVocabulary

buildSummary(IndexReader, ArrayList, int, DoubleVector) - Method in class dragon.ir.summarize.AbstractSentenceSum

buildSummary(IndexReader, ArrayList, int, DoubleVector, DocClusterSet) - Method in class dragon.ir.summarize.AbstractSentenceSum

buildWeightMatrix(ArrayList) - Method in class dragon.ir.summarize.LexRankSummarizer

ByteArrayConvert - Class in dragon.util

Converting byte array

ByteArrayConvert() - Constructor for class dragon.util.ByteArrayConvert

ByteArrayWriter - Class in dragon.util

Writing byte array

ByteArrayWriter(int) - Constructor for class dragon.util.ByteArrayWriter

ByteArrayWriter() - Constructor for class dragon.util.ByteArrayWriter

bytesInBuffer() - Method in class dragon.util.FastBinaryWriter

C

cacheMatrix - Variable in class dragon.matrix.AbstractGiantSparseMatrix

cacheMatrix - Variable in class dragon.matrix.AbstractSuperSparseMatrix

cacheSize - Variable in class dragon.matrix.AbstractSuperSparseMatrix

canIgnore() - Method in class dragon.nlp.Word

category - Variable in class dragon.onlinedb.BasicArticle

Cell - Interface in dragon.matrix

Interface of cell which is the unit of a matrix

cellDataLength - Variable in class dragon.matrix.AbstractMatrix

cf - Variable in class dragon.nlp.extract.AbstractConceptExtractor

cf - Variable in class dragon.nlp.extract.AbstractTripleExtractor

changeTextFileEncoding(String, String, String) - Static method in class dragon.util.FileUtil

changeTextFileEncoding(File, String, String) - Static method in class dragon.util.FileUtil

charSet - Variable in class dragon.onlinedb.BasicCollectionWriter

checkCoordinateTerms(Concept, Concept) - Method in class dragon.nlp.extract.AbstractTripleExtractor

checkEndingWordValidation(String, int) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

checkSentPos(int, ArrayList) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

checkSimpleTermQuery(RelSimpleQuery) - Method in class dragon.ir.search.AbstractSearcher

checkSimpleTermQuery(RelSimpleQuery) - Method in class dragon.ir.search.expand.AbstractQE

checkStartingWordValidation(String, int) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

checkValidation(String, int) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

ChiFeatureSelector - Class in dragon.ir.classification.featureselection

CHI Feature Selector which uses the statistics CHI to select top features

ChiFeatureSelector(double, boolean) - Constructor for class dragon.ir.classification.featureselection.ChiFeatureSelector

children - Variable in class dragon.ir.query.AbstractIRQuery

ChineseVocabulary - Class in dragon.nlp.ontology

Chinese Vocabulary

ChineseVocabulary(String) - Constructor for class dragon.nlp.ontology.ChineseVocabulary

CiteULikeArticleParser - Class in dragon.onlinedb.citeulike

CiteULike Article Parser

CiteULikeArticleParser() - Constructor for class dragon.onlinedb.citeulike.CiteULikeArticleParser

CiteULikeTagQuery - Class in dragon.onlinedb.citeulike

CiteULike Tag Query

CiteULikeTagQuery() - Constructor for class dragon.onlinedb.citeulike.CiteULikeTagQuery

CiteULikeTagQuery(String) - Constructor for class dragon.onlinedb.citeulike.CiteULikeTagQuery

ClassificationEva - Class in dragon.ir.classification

Evaluating classification results

ClassificationEva() - Constructor for class dragon.ir.classification.ClassificationEva

Classifier - Interface in dragon.ir.classification

Interface of Text Classifier

classifierNum - Variable in class dragon.ir.classification.multiclass.AbstractCodeMatrix

classify(DocClassSet, DocClass) - Method in class dragon.ir.classification.AbstractClassifier

classify(DocClassSet, DocClassSet, DocClass) - Method in class dragon.ir.classification.AbstractClassifier

classify(DocClass) - Method in class dragon.ir.classification.AbstractClassifier

classify(IRDoc) - Method in class dragon.ir.classification.AbstractClassifier

classify(DocClass) - Method in interface dragon.ir.classification.Classifier

This method uses the trained model to classify the testing documents.

classify(DocClassSet, DocClass) - Method in interface dragon.ir.classification.Classifier

This method trains the classifier with the training document set and then using the trained model to classify the testing documents.

classify(DocClassSet, DocClassSet, DocClass) - Method in interface dragon.ir.classification.Classifier

classify(IRDoc) - Method in interface dragon.ir.classification.Classifier

Classify one particular document

classify(Row) - Method in interface dragon.ir.classification.Classifier

Classify one particular document

classify(IRDoc) - Method in class dragon.ir.classification.NBClassifier

classify(Row) - Method in class dragon.ir.classification.NBClassifier

classify(DocClassSet, DocClass) - Method in class dragon.ir.classification.NigamActiveLearning

classify(IRDoc) - Method in class dragon.ir.classification.NigamActiveLearning

classNum - Variable in class dragon.ir.classification.AbstractClassifier

classNum - Variable in class dragon.ir.classification.multiclass.AbstractCodeMatrix

classPrior - Variable in class dragon.ir.classification.NBClassifier

clauseFinder - Variable in class dragon.nlp.extract.AbstractTripleExtractor

ClauseFinder - Class in dragon.nlp.extract

Identify clauses in an English sentence

ClauseFinder() - Constructor for class dragon.nlp.extract.ClauseFinder

clauseIdentify(Sentence) - Method in class dragon.nlp.extract.ClauseFinder

clauseIdentify_enabled - Variable in class dragon.nlp.extract.AbstractTripleExtractor

clean() - Method in class dragon.ir.index.BasicIndexWriter

clean() - Method in interface dragon.ir.index.IndexWriter

For disk-based indexing, this method delete all files under the indexing folder.

clean() - Method in class dragon.ir.index.OnlineIndexWriter

clean() - Method in class dragon.ir.index.sequence.BasicSequenceIndexWriter

clean() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

clearAllCaches() - Method in class dragon.nlp.extract.BasicTermExtractor

clearCachedAbbr() - Method in class dragon.nlp.extract.Abbreviation

close() - Method in class dragon.ir.index.AbstractIndexReader

close() - Method in class dragon.ir.index.BasicIndexer

close() - Method in class dragon.ir.index.BasicIndexWriteController

close() - Method in class dragon.ir.index.BasicIndexWriter

close() - Method in class dragon.ir.index.BasicIRDocIndexList

close() - Method in class dragon.ir.index.BasicIRRelationIndexList

close() - Method in class dragon.ir.index.BasicIRTermIndexList

close() - Method in class dragon.ir.index.DualIndexer

close() - Method in interface dragon.ir.index.Indexer

This method releases occupied resources.

close() - Method in interface dragon.ir.index.IndexReader

This method releases all occupied resources.

close() - Method in interface dragon.ir.index.IndexWriter

close() - Method in interface dragon.ir.index.IRDocIndexList

Releases occupied resources

close() - Method in interface dragon.ir.index.IRRelationIndexList

Releases occupied resources.

close() - Method in interface dragon.ir.index.IRSignatureIndexList

close() - Method in interface dragon.ir.index.IRTermIndexList

Releases occupied resources

close() - Method in class dragon.ir.index.OnlineIndexer

close() - Method in class dragon.ir.index.OnlineIndexWriteController

close() - Method in class dragon.ir.index.OnlineIndexWriter

close() - Method in class dragon.ir.index.OnlineIRDocIndexList

close() - Method in class dragon.ir.index.OnlineIRRelationIndexList

close() - Method in class dragon.ir.index.OnlineIRTermIndexList

close() - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

close() - Method in class dragon.ir.index.sentence.BasicSentenceIndexer

close() - Method in class dragon.ir.index.sentence.BasicSentenceIndexReader

close() - Method in class dragon.ir.index.sentence.BasicSentenceWriteController

close() - Method in class dragon.ir.index.sentence.DualSentenceIndexer

close() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

close() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexReader

close() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

close() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

close() - Method in class dragon.ir.index.sequence.BasicSequenceIndexWriter

close() - Method in class dragon.ir.index.sequence.OnlineSequenceBase

close() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

close() - Method in class dragon.ir.index.sequence.SequenceFileReader

close() - Method in class dragon.ir.index.sequence.SequenceFileWriter

close() - Method in interface dragon.ir.index.sequence.SequenceReader

close() - Method in interface dragon.ir.index.sequence.SequenceWriter

close() - Method in class dragon.ir.kngbase.HALSpace

close() - Method in class dragon.matrix.AbstractFlatSparseMatrix

close() - Method in class dragon.matrix.AbstractGiantSparseMatrix

close() - Method in class dragon.matrix.AbstractSuperSparseMatrix

close() - Method in class dragon.matrix.DoubleFlatDenseMatrix

close() - Method in class dragon.matrix.IntFlatDenseMatrix

close() - Method in interface dragon.matrix.Matrix

Close the matrix and release all resources.

close() - Method in interface dragon.ml.seqmodel.data.DataReader

Releases occupied resources

close() - Method in interface dragon.ml.seqmodel.data.DataWriter

Releases occupied resources

close() - Method in class dragon.ml.seqmodel.data.FlatSegmentReader

close() - Method in class dragon.ml.seqmodel.data.FlatSegmentWriter

close() - Method in class dragon.nlp.SimpleElementList

close() - Method in class dragon.nlp.SimplePairList

close() - Method in class dragon.nlp.tool.Annie

close() - Method in class dragon.nlp.tool.BrillTagger

Close the opened resources

close() - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

close() - Method in class dragon.nlp.tool.xtract.SentenceBase

close() - Method in interface dragon.nlp.tool.xtract.WordPairIndexer

close() - Method in class dragon.nlp.tool.xtract.WordPairStatList

close() - Method in class dragon.onlinedb.AbstractQuery

close() - Method in class dragon.onlinedb.ArrayCollectionReader

close() - Method in class dragon.onlinedb.BasicArticleIndex

close() - Method in class dragon.onlinedb.BasicCollectionPreparer

close() - Method in class dragon.onlinedb.BasicCollectionReader

close() - Method in class dragon.onlinedb.BasicCollectionWriter

close() - Method in interface dragon.onlinedb.CollectionReader

Closes the collection reader and releases all occupied resources.

close() - Method in interface dragon.onlinedb.CollectionWriter

Closes the collection writer and releases all resources.

close() - Method in class dragon.onlinedb.SimpleCollectionReader

close() - Method in class dragon.onlinedb.trec.AbstractTopicReader

close() - Method in class dragon.onlinedb.trec.TrecCollectionReader

close() - Method in class dragon.onlinedb.trec.TrecFileReader

close() - Method in class dragon.util.ByteArrayWriter

close() - Method in class dragon.util.FastBinaryWriter

close() - Method in class dragon.util.FastFileInputStream

closeConnection() - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

closeConnection(Connection) - Static method in class dragon.util.DBUtil

cluster() - Method in class dragon.ir.clustering.AbstractClustering

cluster(IRDoc[]) - Method in class dragon.ir.clustering.BasicKMean

cluster(IRDoc[]) - Method in class dragon.ir.clustering.BisectKMean

cluster() - Method in interface dragon.ir.clustering.Clustering

Cluster all documents in the index reader to the given number of clusters

cluster(IRDoc[]) - Method in interface dragon.ir.clustering.Clustering

Cluster given testing documents to the given number of clusters

cluster(IRDoc[]) - Method in class dragon.ir.clustering.HierClustering

cluster(IRDoc[]) - Method in class dragon.ir.clustering.LinkKMean

Clustering - Interface in dragon.ir.clustering

Interface of text clustering method

ClusteringConfig - Class in dragon.config

Clustering configuration

ClusteringConfig() - Constructor for class dragon.config.ClusteringConfig

ClusteringConfig(ConfigureNode) - Constructor for class dragon.config.ClusteringConfig

ClusteringConfig(String) - Constructor for class dragon.config.ClusteringConfig

ClusteringEva - Class in dragon.ir.clustering

Class for evaluating clustering results

ClusteringEva() - Constructor for class dragon.ir.clustering.ClusteringEva

ClusteringEvaAppConfig - Class in dragon.config

Clustering evaluation configuration

ClusteringEvaAppConfig() - Constructor for class dragon.config.ClusteringEvaAppConfig

ClusterLexRankSummarizer - Class in dragon.ir.summarize

An extension of LexRank text summarizer

ClusterLexRankSummarizer(OnlineSentenceIndexer, int) - Constructor for class dragon.ir.summarize.ClusterLexRankSummarizer

ClusterLexRankSummarizer(OnlineSentenceIndexer, boolean, int) - Constructor for class dragon.ir.summarize.ClusterLexRankSummarizer

ClusterModel - Interface in dragon.ir.clustering.clustermodel

Interface of cluster model which compute the distance between a document and a document cluster

clusterModel - Variable in class dragon.ir.summarize.ClusterLexRankSummarizer

ClusterModelConfig - Class in dragon.config

Cluster model configuration

ClusterModelConfig() - Constructor for class dragon.config.ClusterModelConfig

ClusterModelConfig(ConfigureNode) - Constructor for class dragon.config.ClusterModelConfig

ClusterModelConfig(String) - Constructor for class dragon.config.ClusterModelConfig

clusterNum - Variable in class dragon.ir.clustering.AbstractClustering

clusterNum - Variable in class dragon.ir.clustering.clustermodel.AbstractClusterModel

clusterSet - Variable in class dragon.ir.clustering.AbstractClustering

clusterSet - Variable in class dragon.ir.clustering.BisectKMean

CnSimpleDocumentParser - Class in dragon.nlp.extract

Title:

CnSimpleDocumentParser() - Constructor for class dragon.nlp.extract.CnSimpleDocumentParser

cntsArray - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

cntsOverAllFeature - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

cntsOverAllState - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

CoarseSgmArticleParser - Class in dragon.onlinedb.trec

A coarse parser for sgm-styled news articles

CoarseSgmArticleParser() - Constructor for class dragon.onlinedb.trec.CoarseSgmArticleParser

CodeMatrix - Interface in dragon.ir.classification.multiclass

Code Matrix Interface

CodeMatrixConfig - Class in dragon.config

Code Matrix Configuration

CodeMatrixConfig() - Constructor for class dragon.config.CodeMatrixConfig

CodeMatrixConfig(ConfigureNode) - Constructor for class dragon.config.CodeMatrixConfig

CodeMatrixConfig(String) - Constructor for class dragon.config.CodeMatrixConfig

col - Variable in class dragon.matrix.DoubleCell

col - Variable in class dragon.matrix.IntCell

collectFeatureIdentifiers(Dataset) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

collection - Variable in class dragon.ir.index.AbstractIndexReader

collection - Variable in class dragon.ir.index.AbstractIndexWriter

collection - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

collection - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

collectionFile - Variable in class dragon.onlinedb.BasicCollectionReader

collectionNum - Variable in class dragon.ir.topicmodel.CrossMixtureModel

CollectionPreparer - Interface in dragon.onlinedb

Interface of Collection Preparer

collectionReader - Variable in class dragon.ir.index.AbstractIndexReader

collectionReader - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

collectionReader - Variable in class dragon.ir.summarize.LexRankSummarizer

CollectionReader - Interface in dragon.onlinedb

Interface of Collection Reader which read out articles from a collection one by one

CollectionReaderConfig - Class in dragon.config

Collection reader configuration

CollectionReaderConfig() - Constructor for class dragon.config.CollectionReaderConfig

CollectionReaderConfig(ConfigureNode) - Constructor for class dragon.config.CollectionReaderConfig

CollectionReaderConfig(String) - Constructor for class dragon.config.CollectionReaderConfig

CollectionWriter - Interface in dragon.onlinedb

Interface of Collection Writer

collectTagInformation(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

CollinsBasicTrainer - Class in dragon.ml.seqmodel.crf

Collins training conditional random field

CollinsBasicTrainer(ModelGraph, FeatureGenerator) - Constructor for class dragon.ml.seqmodel.crf.CollinsBasicTrainer

CollinsSegmentTrainer - Class in dragon.ml.seqmodel.crf

Collins segment trainer

CollinsSegmentTrainer(ModelGraph, FeatureGenerator, int) - Constructor for class dragon.ml.seqmodel.crf.CollinsSegmentTrainer

columnBase - Variable in class dragon.matrix.AbstractMatrix

columns - Variable in class dragon.matrix.AbstractMatrix

columns() - Method in class dragon.matrix.AbstractMatrix

columns - Variable in class dragon.matrix.IntRow

columns() - Method in interface dragon.matrix.Matrix

columns() - Method in class dragon.matrix.SparseMatrixFactory

comCoefficient - Variable in class dragon.ir.topicmodel.CrossMixtureModel

compare(Object, Object) - Method in class dragon.matrix.CoordinateComparator

compare(Object, Object) - Method in class dragon.nlp.compare.AlphabetaComparator

compare(Object, Object) - Method in class dragon.nlp.compare.ConceptEntryIDComparator

compare(Object, Object) - Method in class dragon.nlp.compare.ConceptNameComparator

compare(Object, Object) - Method in class dragon.nlp.compare.FrequencyComparator

compare(Object, Object) - Method in class dragon.nlp.compare.IndexComparator

compare(Object, Object) - Method in class dragon.nlp.compare.TermLemmaComparator

compare(Object, Object) - Method in class dragon.nlp.compare.WeightComparator

compareTo(Object) - Method in class dragon.ir.index.IRDoc

compareTo(IRDoc) - Method in class dragon.ir.index.IRDoc

compareTo(Object) - Method in class dragon.ir.index.IRRelation

compareTo(Object) - Method in class dragon.ir.index.IRSection

compareTo(Object) - Method in class dragon.ir.index.IRTerm

compareTo(Object) - Method in class dragon.ir.summarize.TextUnit

compareTo(Object) - Method in class dragon.matrix.AbstractCell

compareTo(Object) - Method in class dragon.matrix.AbstractRow

compareTo(Object) - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

compareTo(Object) - Method in class dragon.ml.seqmodel.model.Edge

compareTo(Object) - Method in class dragon.nlp.ontology.BasicTerm

compareTo(Object) - Method in class dragon.nlp.ontology.mesh.MeshNode

compareTo(Object) - Method in class dragon.nlp.ontology.umls.UmlsCUI

compareTo(Object) - Method in class dragon.nlp.ontology.umls.UmlsSTY

compareTo(Object) - Method in class dragon.nlp.Phrase

compareTo(Phrase) - Method in class dragon.nlp.Phrase

compareTo(Object) - Method in class dragon.nlp.SimpleElement

compareTo(Object) - Method in class dragon.nlp.SimplePair

compareTo(Object) - Method in class dragon.nlp.Term

compareTo(Term) - Method in class dragon.nlp.Term

compareTo(Object) - Method in class dragon.nlp.Token

compareTo(Token) - Method in class dragon.nlp.Token

compareTo(Object) - Method in class dragon.nlp.tool.lemmatiser.WordMap

compareTo(Object) - Method in class dragon.nlp.tool.xtract.WordPairStat

compareTo(Object) - Method in class dragon.nlp.Triple

compareTo(Object) - Method in class dragon.onlinedb.BasicArticle

compareTo(Object) - Method in class dragon.onlinedb.BasicArticleKey

compareTo(Object) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

compareTo(Object) - Method in class dragon.onlinedb.searchengine.WebLink

COMPLETE_LINKAGE - Static variable in class dragon.ir.clustering.HierClustering

CompleteModel - Class in dragon.ml.seqmodel.model

Complete model graph

CompleteModel(int) - Constructor for class dragon.ml.seqmodel.model.CompleteModel

CompleteModel(int, int) - Constructor for class dragon.ml.seqmodel.model.CompleteModel

componentNum - Variable in class dragon.ir.search.smooth.AbstractMixtureWeightEM

CompoundTermFinder - Class in dragon.nlp.extract

Finding compond terms

CompoundTermFinder() - Constructor for class dragon.nlp.extract.CompoundTermFinder

CompoundTermFinder(String) - Constructor for class dragon.nlp.extract.CompoundTermFinder

compoundTermPredict_enabled - Variable in class dragon.nlp.extract.AbstractTermExtractor

compTermFinder - Variable in class dragon.nlp.extract.AbstractTermExtractor

computeAuthorityHub(SparseMatrix) - Method in class dragon.matrix.vector.HITS

computeAuthorityHub(SparseMatrix, SparseMatrix) - Method in class dragon.matrix.vector.HITS

computeFunctionGradient(Dataset, double[], double[]) - Method in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

computeFunctionGradient(Dataset, double[], double[]) - Method in class dragon.ml.seqmodel.crf.LBFGSSegmentTrainer

computeFunctionGradientLL(Dataset, double[], double[]) - Method in class dragon.ml.seqmodel.crf.LBFGSSegmentTrainer

computeSimilarity(IRDoc, IRDoc) - Method in class dragon.ir.summarize.ClusterLexRankSummarizer

computeSimilarity(IRDoc, IRDoc) - Method in class dragon.ir.summarize.LexRankSummarizer

LexRank Summarizer uses cosine similrity.

computeSimilarity(IRDoc, IRDoc) - Method in class dragon.ir.summarize.SemanticRankSummarizer

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.AbsoluteDiscountSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.AbstractSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.DirichletSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.JMSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.OkapiSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.PivotedNormSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.TFIDFSmoother

computeSmoothedProb(int) - Method in class dragon.ir.search.smooth.TwoStageSmoother

computeTransMatrix(double[], DataSequence, int, int, DoubleDenseMatrix, boolean) - Method in class dragon.ml.seqmodel.crf.AbstractCRF

computeTransMatrix(double[], DoubleDenseMatrix, boolean) - Method in class dragon.ml.seqmodel.crf.AbstractCRF

comThemeCoeffi - Variable in class dragon.ir.topicmodel.TwoDimensionEM

Concept - Interface in dragon.nlp

Interface of Concept which could be a single word, a multiword phrase, or an ontological term

ConceptEntryIDComparator - Class in dragon.nlp.compare

Compare concept entry ID of two objects

ConceptEntryIDComparator() - Constructor for class dragon.nlp.compare.ConceptEntryIDComparator

conceptExtractor - Variable in class dragon.nlp.extract.AbstractTripleExtractor

ConceptExtractor - Interface in dragon.nlp.extract

Interface of Concept Extractors

ConceptExtractorConfig - Class in dragon.config

Concept extractor configuration

ConceptExtractorConfig() - Constructor for class dragon.config.ConceptExtractorConfig

ConceptExtractorConfig(ConfigureNode) - Constructor for class dragon.config.ConceptExtractorConfig

ConceptExtractorConfig(String) - Constructor for class dragon.config.ConceptExtractorConfig

ConceptFilter - Interface in dragon.nlp.extract

Interface of concept filter

conceptFilter_enabled - Variable in class dragon.nlp.extract.AbstractConceptExtractor

conceptFilter_enabled - Variable in class dragon.nlp.extract.AbstractTripleExtractor

ConceptFilterConfig - Class in dragon.config

Concept filter configuration

ConceptFilterConfig() - Constructor for class dragon.config.ConceptFilterConfig

ConceptFilterConfig(ConfigureNode) - Constructor for class dragon.config.ConceptFilterConfig

ConceptFilterConfig(String) - Constructor for class dragon.config.ConceptFilterConfig

conceptList - Variable in class dragon.nlp.extract.AbstractConceptExtractor

conceptList - Variable in class dragon.nlp.extract.AbstractTripleExtractor

ConceptNameComparator - Class in dragon.nlp.compare

Compare concept names of two objects

ConceptNameComparator() - Constructor for class dragon.nlp.compare.ConceptNameComparator

CONCLUSION - Static variable in class dragon.nlp.Document

ConfigureNode - Interface in dragon.config

Interface of Congituration Node

ConfigUtil - Class in dragon.config

Utility class for configuration which can parse XML document that contains application information

ConfigUtil() - Constructor for class dragon.config.ConfigUtil

ConfigUtil(ConfigureNode) - Constructor for class dragon.config.ConfigUtil

ConfigUtil(String) - Constructor for class dragon.config.ConfigUtil

constraint - Variable in class dragon.ir.query.AbstractPredicate

contain(Object) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

contain(Object) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

contain(Object) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

containDoc(IRDoc) - Method in class dragon.ir.clustering.DocCluster

contains(IRDoc) - Method in class dragon.ir.classification.DocClass

contains(TextUnit) - Method in class dragon.ir.summarize.TopicSummary

contains(String) - Method in class dragon.nlp.extract.Abbreviation

contains(String) - Method in class dragon.nlp.SimpleElementList

contains(String) - Method in class dragon.onlinedb.BasicArticleIndex

contains(Object) - Method in class dragon.util.SortedArray

content - Variable in class dragon.ml.seqmodel.data.BasicToken

Conversion - Class in dragon.util

Converting character number to digit number

Conversion() - Constructor for class dragon.util.Conversion

convert(ConfigureNode) - Method in class dragon.config.IndexConvertAppConfig

CooccurrenceAppConfig - Class in dragon.config

Co-occurence application configuration

CooccurrenceAppConfig() - Constructor for class dragon.config.CooccurrenceAppConfig

CooccurrenceGenerator - Class in dragon.ir.kngbase

Generate Cooccurrence Matrix

CooccurrenceGenerator() - Constructor for class dragon.ir.kngbase.CooccurrenceGenerator

CoordinateComparator - Class in dragon.matrix

The comparator for a coordinate of a sparse matrix which compares the two cell objects regarding to a coordinate

CoordinateComparator() - Constructor for class dragon.matrix.CoordinateComparator

coordinatingCheck_enabled - Variable in class dragon.nlp.extract.AbstractTermExtractor

coordinatingCheck_enabled - Variable in class dragon.nlp.extract.AbstractTripleExtractor

coordinatingChecker - Variable in class dragon.nlp.extract.AbstractTripleExtractor

CoordinatingChecker - Class in dragon.nlp.extract

Coordinating Component Identification

CoordinatingChecker() - Constructor for class dragon.nlp.extract.CoordinatingChecker

coordinatingTermPredict_enabled - Variable in class dragon.nlp.extract.AbstractTermExtractor

copy() - Method in class dragon.ir.index.IRDoc

copy() - Method in class dragon.ir.index.IRRelation

copy() - Method in class dragon.ir.index.IRSection

copy() - Method in class dragon.ir.index.IRTerm

copy() - Method in class dragon.ir.query.SimpleTermPredicate

copy() - Method in class dragon.matrix.vector.DoubleVector

copy() - Method in class dragon.matrix.vector.IntVector

copy() - Method in class dragon.ml.seqmodel.data.BasicDataSequence

copy() - Method in class dragon.ml.seqmodel.data.BasicDataset

copy() - Method in class dragon.ml.seqmodel.data.BasicToken

copy() - Method in interface dragon.ml.seqmodel.data.DataSequence

Makes a copy of the current data sequence

copy() - Method in class dragon.ml.seqmodel.data.POSToken

copy() - Method in class dragon.ml.seqmodel.feature.BasicFeature

copy() - Method in interface dragon.ml.seqmodel.feature.Feature

Gets a copy of the current feature

copy() - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

copy() - Method in interface dragon.nlp.Concept

copy() - Method in class dragon.nlp.Phrase

copy() - Method in class dragon.nlp.Term

copy() - Method in class dragon.nlp.Token

copy() - Method in class dragon.nlp.tool.xtract.WordPairStat

copy() - Method in class dragon.nlp.Word

copy(Comparator) - Method in class dragon.util.SortedArray

copy() - Method in class dragon.util.SortedArray

copyArray(double[], double[]) - Static method in class dragon.util.MathUtil

copyFrom(BasicFeature) - Method in class dragon.ml.seqmodel.feature.BasicFeature

coReference - Variable in class dragon.nlp.extract.AbstractTripleExtractor

CoReference - Class in dragon.nlp.extract

Find out co-reference within one sentence or consecutive sentences

CoReference() - Constructor for class dragon.nlp.extract.CoReference

coReference_enabled - Variable in class dragon.nlp.extract.AbstractTripleExtractor

correctAnnotatedLabels - Variable in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

correctAnnotatedLabels() - Method in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

correctAnnotatedLabels() - Method in interface dragon.ml.seqmodel.evaluate.Evaluator

cosine(int, int) - Method in class dragon.matrix.AbstractDenseMatrix

cosine(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

cosine(int, int) - Method in interface dragon.matrix.Matrix

This method treats each row a vector and return the cosine similarity of two rows.

CosineClusterModel - Class in dragon.ir.clustering.clustermodel

Cluster model which uses vector cosine to compute the distance between a document and a cluster

CosineClusterModel(int, SparseMatrix) - Constructor for class dragon.ir.clustering.clustermodel.CosineClusterModel

CosineDocDistance - Class in dragon.ir.clustering.docdistance

Cosine document similarity/distance measure

CosineDocDistance(SparseMatrix) - Constructor for class dragon.ir.clustering.docdistance.CosineDocDistance

Counter - Class in dragon.nlp

A light integer counter

Counter() - Constructor for class dragon.nlp.Counter

Counter(int) - Constructor for class dragon.nlp.Counter

countOccurrence(String) - Method in class dragon.util.TextUtil

countOccurrence(String, int) - Method in class dragon.util.TextUtil

createCell(int, int, byte[]) - Method in class dragon.matrix.DoubleFlatSparseMatrix

createCell(int, int, String) - Method in class dragon.matrix.DoubleFlatSparseMatrix

createCell(int, int, byte[]) - Method in class dragon.matrix.DoubleGiantSparseMatrix

createCell(int, int, String) - Method in class dragon.matrix.DoubleGiantSparseMatrix

createCell(int, int, byte[]) - Method in class dragon.matrix.DoubleSuperSparseMatrix

createCell(int, int, String) - Method in class dragon.matrix.DoubleSuperSparseMatrix

createCell(int, int, byte[]) - Method in class dragon.matrix.IntFlatSparseMatrix

createCell(int, int, String) - Method in class dragon.matrix.IntFlatSparseMatrix

createCell(int, int, byte[]) - Method in class dragon.matrix.IntGiantSparseMatrix

createCell(int, int, String) - Method in class dragon.matrix.IntGiantSparseMatrix

createCell(int, int, byte[]) - Method in class dragon.matrix.IntSuperSparseMatrix

createCell(int, int, String) - Method in class dragon.matrix.IntSuperSparseMatrix

createCell(int, int, byte[]) - Method in interface dragon.matrix.SparseMatrix

This method will be called when the sparse matrix loads data from a binary file.

createCell(int, int, String) - Method in interface dragon.matrix.SparseMatrix

This method will be called when the sparse matrix loads data from a text file.

createFlatSparseMatrix(boolean, boolean) - Method in class dragon.matrix.AbstractGiantSparseMatrix

createFlatSparseMatrix(boolean, boolean) - Method in class dragon.matrix.AbstractSuperSparseMatrix

createFlatSparseMatrix(boolean, boolean) - Method in class dragon.matrix.DoubleGiantSparseMatrix

createFlatSparseMatrix(boolean, boolean) - Method in class dragon.matrix.DoubleSuperSparseMatrix

createFlatSparseMatrix(boolean, boolean) - Method in class dragon.matrix.IntGiantSparseMatrix

createFlatSparseMatrix(boolean, boolean) - Method in class dragon.matrix.IntSuperSparseMatrix

createRow(int, int, byte[]) - Method in class dragon.matrix.AbstractGiantSparseMatrix

createRow(int, int, byte[]) - Method in class dragon.matrix.AbstractSuperSparseMatrix

createRow(int, int, byte[]) - Method in class dragon.matrix.DoubleGiantSparseMatrix

createRow(int, int, byte[]) - Method in class dragon.matrix.DoubleSuperSparseMatrix

createRow(int, int, byte[]) - Method in class dragon.matrix.IntGiantSparseMatrix

createRow(int, int, byte[]) - Method in class dragon.matrix.IntSuperSparseMatrix

createSparseMatrix() - Method in class dragon.matrix.DoubleFlatSparseMatrix

createSparseMatrix() - Method in class dragon.matrix.DoubleGiantSparseMatrix

createSparseMatrix() - Method in class dragon.matrix.DoubleSuperSparseMatrix

createSparseMatrix() - Method in class dragon.matrix.IntFlatSparseMatrix

createSparseMatrix() - Method in class dragon.matrix.IntGiantSparseMatrix

createSparseMatrix() - Method in class dragon.matrix.IntSuperSparseMatrix

createSparseMatrix() - Method in interface dragon.matrix.SparseMatrix

This method return an empty sparse matrix with the same implemented type as the current matrix.

CrossMixtureModel - Class in dragon.ir.topicmodel

Cross mixture topic model

CrossMixtureModel(IntSparseMatrix[], int, double[], double, double) - Constructor for class dragon.ir.topicmodel.CrossMixtureModel

cuiAt(int) - Method in class dragon.nlp.ontology.umls.UmlsCUIList

curArticle - Variable in class dragon.onlinedb.AbstractQuery

curArticleNo - Variable in class dragon.onlinedb.AbstractQuery

curDocIndex - Variable in class dragon.ir.index.AbstractIndexWriteController

curDocKey - Variable in class dragon.ir.index.AbstractIndexWriteController

curEndPos - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

curId - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

curPageNo - Variable in class dragon.onlinedb.AbstractQuery

curPageWidth - Variable in class dragon.onlinedb.AbstractQuery

currentFeatureType - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

currentWindow - Variable in class dragon.ml.seqmodel.feature.FeatureTypeWindow

curSeq - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

curStartPos - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

D

data - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

database - Variable in class dragon.onlinedb.pubmed.PubMedQuery

DataReader - Interface in dragon.ml.seqmodel.data

Interface of sequence data reader

dataSeq - Variable in class dragon.ml.seqmodel.feature.FeatureTypeWindow

DataSequence - Interface in dragon.ml.seqmodel.data

Interface of data sequence

Dataset - Interface in dragon.ml.seqmodel.data

The basic interface to be implemented by the user of this package for providing training and test data to the learner.

DataWriter - Interface in dragon.ml.seqmodel.data

Interface of sequence data writer

date - Variable in class dragon.onlinedb.BasicArticle

daxpy(int, double, double[], int, int, double[], int, int) - Static method in class dragon.ml.seqmodel.crf.LBFGS

Compute the sum of a vector times a scalara plus another vector.

DBUtil - Class in dragon.util

Basic database utility operations

DBUtil() - Constructor for class dragon.util.DBUtil

ddot(int, double[], int, int, double[], int, int) - Static method in class dragon.ml.seqmodel.crf.LBFGS

Compute the dot product of two vectors.

de.julielab.protocols.classpath - package de.julielab.protocols.classpath

decode(CodeMatrix, double[]) - Method in class dragon.ir.classification.multiclass.LossMultiClassDecoder

decode(CodeMatrix, double[]) - Method in interface dragon.ir.classification.multiclass.MultiClassDecoder

Predicts the label of the example given the code matrix and the results of all binary classifiers

DEF_SEC_NUM - Static variable in class dragon.ir.index.IRSection

defaultEncoding - Variable in class dragon.onlinedb.searchengine.AbstractSearchEngine

defParaDelimitor - Static variable in class dragon.nlp.extract.EngDocumentParser

defSentDelimitor - Static variable in class dragon.nlp.extract.EngDocumentParser

defWordDelimitor - Static variable in class dragon.nlp.extract.EngDocumentParser

DenseMatrix - Interface in dragon.matrix

Interface of dense matrix

depthFirstSearch(IRQuery) - Method in class dragon.ir.search.FullRankSearcher

directory - Variable in class dragon.ir.index.FileIndex

DirichletSmoother - Class in dragon.ir.search.smooth

Dirichlet Smoother

DirichletSmoother(IRCollection, double) - Constructor for class dragon.ir.search.smooth.DirichletSmoother

disable() - Method in class dragon.ir.index.IRSection

distance() - Method in class dragon.matrix.vector.DoubleVector

distance(DoubleVector) - Method in class dragon.matrix.vector.DoubleVector

distance() - Method in class dragon.matrix.vector.IntVector

distance(IntVector) - Method in class dragon.matrix.vector.IntVector

distanceMetric - Variable in class dragon.ir.summarize.LexRankSummarizer

distMetric - Variable in class dragon.ir.clustering.BasicKMean

distMetric - Variable in class dragon.ir.clustering.BisectKMean

doc_cache_size - Static variable in class dragon.ir.index.AbstractIndexWriter

doc_cache_size - Static variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

doc_in_cache - Variable in class dragon.ir.index.AbstractIndexWriter

DocClass - Class in dragon.ir.classification

The basic data structure for a class for documents

DocClass(int) - Constructor for class dragon.ir.classification.DocClass

DocClassSet - Class in dragon.ir.classification

The basic data structure for a set of classes for documents

DocClassSet(int) - Constructor for class dragon.ir.classification.DocClassSet

DocCluster - Class in dragon.ir.clustering

Data structure for document cluster

DocCluster(int) - Constructor for class dragon.ir.clustering.DocCluster

DocClusterSet - Class in dragon.ir.clustering

Data structure for a set of document clusters.

DocClusterSet(int) - Constructor for class dragon.ir.clustering.DocClusterSet

DocDistance - Interface in dragon.ir.clustering.docdistance

Interface of pair-wised document distance metric

DocDistanceConfig - Class in dragon.config

Document distance calculation configuration

DocDistanceConfig() - Constructor for class dragon.config.DocDistanceConfig

DocDistanceConfig(ConfigureNode) - Constructor for class dragon.config.DocDistanceConfig

DocDistanceConfig(String) - Constructor for class dragon.config.DocDistanceConfig

docFirstOptimal - Variable in class dragon.ir.search.smooth.AbstractSmoother

DocFirstTransSmoother - Class in dragon.ir.search.smooth

A Smoother using relation-term translations

DocFirstTransSmoother(IndexReader, DoubleSparseMatrix, boolean, double, Smoother) - Constructor for class dragon.ir.search.smooth.DocFirstTransSmoother

DocFirstTransSmoother(IndexReader, IndexReader, DoubleSparseMatrix, double, Smoother) - Constructor for class dragon.ir.search.smooth.DocFirstTransSmoother

DocFrequencyFilter - Class in dragon.ir.clustering.featurefilter

Unsupervised Feature Selector which exclude features with its document frequency less than a given threshold

DocFrequencyFilter(int) - Constructor for class dragon.ir.clustering.featurefilter.DocFrequencyFilter

DocFrequencySelector - Class in dragon.ir.classification.featureselection

Unsupervised Feature Selector which exclude features with its document frequency less than a given threshold

DocFrequencySelector(int) - Constructor for class dragon.ir.classification.featureselection.DocFrequencySelector

docIndexList - Variable in class dragon.ir.index.AbstractIndexReader

docIndexList - Variable in class dragon.ir.index.AbstractIndexWriter

docIndexList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

docIndexList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

docKeyList - Variable in class dragon.ir.index.AbstractIndexReader

docKeyList - Variable in class dragon.ir.index.AbstractIndexWriteController

docKeyList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

docKeyList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

docKeyList - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

docNum - Variable in class dragon.ir.topicmodel.AbstractTopicModel

docNum - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

docrelationMatrix - Variable in class dragon.ir.index.AbstractIndexReader

docrelationMatrix - Variable in class dragon.ir.index.AbstractIndexWriter

DocRepresentation - Class in dragon.ir.kngbase

A tool for converting document represenations

DocRepresentation(IndexReader) - Constructor for class dragon.ir.kngbase.DocRepresentation

DocRepresentation(IndexReader, int[]) - Constructor for class dragon.ir.kngbase.DocRepresentation

DocRepresentationAppConfig - Class in dragon.config

Document representation application configuration

DocRepresentationAppConfig() - Constructor for class dragon.config.DocRepresentationAppConfig

doctermMatrix - Variable in class dragon.ir.classification.AbstractClassifier

doctermMatrix - Variable in class dragon.ir.index.AbstractIndexReader

doctermMatrix - Variable in class dragon.ir.index.AbstractIndexWriter

doctermMatrix - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

doctermSeq - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

DocTransMixtureWeightEM - Class in dragon.ir.search.smooth

Computes the Mixture Weights for Models using translations

DocTransMixtureWeightEM(IndexReader, int, QueryFirstTransSmoother) - Constructor for class dragon.ir.search.smooth.DocTransMixtureWeightEM

DocTransMixtureWeightEM(IndexReader, int, DocFirstTransSmoother) - Constructor for class dragon.ir.search.smooth.DocTransMixtureWeightEM

Document - Class in dragon.nlp

Data structure for document

Document() - Constructor for class dragon.nlp.Document

DocumentParser - Interface in dragon.nlp

Parse a text document into paragraphs, sentences and words

DocumentParserConfig - Class in dragon.config

Document parser configuration

DocumentParserConfig() - Constructor for class dragon.config.DocumentParserConfig

DocumentParserConfig(ConfigureNode) - Constructor for class dragon.config.DocumentParserConfig

DocumentParserConfig(String) - Constructor for class dragon.config.DocumentParserConfig

doScaling - Variable in class dragon.ml.seqmodel.crf.AbstractTrainer

dotProduct(DoubleVector) - Method in class dragon.matrix.vector.DoubleVector

dotProduct(IntVector) - Method in class dragon.matrix.vector.IntVector

DoubleCell - Class in dragon.matrix

The cell object for handling double data

DoubleCell(int, int) - Constructor for class dragon.matrix.DoubleCell

DoubleCell(int, int, double) - Constructor for class dragon.matrix.DoubleCell

DoubleDenseMatrix - Interface in dragon.matrix

Interface of Double Dense Matrix

DoubleFlatDenseMatrix - Class in dragon.matrix

Double flat dense matrix which provides options of storing data to disk in binary manner or text manner

DoubleFlatDenseMatrix(double[][]) - Constructor for class dragon.matrix.DoubleFlatDenseMatrix

DoubleFlatDenseMatrix(int, int) - Constructor for class dragon.matrix.DoubleFlatDenseMatrix

DoubleFlatDenseMatrix(String) - Constructor for class dragon.matrix.DoubleFlatDenseMatrix

DoubleFlatDenseMatrix(String, boolean) - Constructor for class dragon.matrix.DoubleFlatDenseMatrix

DoubleFlatSparseMatrix - Class in dragon.matrix

Double flat sparse matrix handles data smaller than super sparse matrix, however it provides options of storing data to disk either in binary or text format

DoubleFlatSparseMatrix() - Constructor for class dragon.matrix.DoubleFlatSparseMatrix

DoubleFlatSparseMatrix(boolean, boolean) - Constructor for class dragon.matrix.DoubleFlatSparseMatrix

DoubleFlatSparseMatrix(String) - Constructor for class dragon.matrix.DoubleFlatSparseMatrix

DoubleFlatSparseMatrix(String, boolean) - Constructor for class dragon.matrix.DoubleFlatSparseMatrix

DoubleGiantSparseMatrix - Class in dragon.matrix

Giant sparse matrix handles extreme large double sparse matrix

DoubleGiantSparseMatrix(String, String) - Constructor for class dragon.matrix.DoubleGiantSparseMatrix

DoubleGiantSparseMatrix(String, String, boolean, boolean) - Constructor for class dragon.matrix.DoubleGiantSparseMatrix

DoubleRow - Class in dragon.matrix

Row of matrix for data type of double

DoubleRow() - Constructor for class dragon.matrix.DoubleRow

DoubleRow(int, int, int[], double[]) - Constructor for class dragon.matrix.DoubleRow

DoubleSparseMatrix - Interface in dragon.matrix

Interface of Double-typed Sparse Matrix

DoubleSuperSparseMatrix - Class in dragon.matrix

Super sparse matrix for double data type

DoubleSuperSparseMatrix(String) - Constructor for class dragon.matrix.DoubleSuperSparseMatrix

DoubleSuperSparseMatrix(String, String) - Constructor for class dragon.matrix.DoubleSuperSparseMatrix

DoubleSuperSparseMatrix(String, boolean, boolean) - Constructor for class dragon.matrix.DoubleSuperSparseMatrix

DoubleSuperSparseMatrix(String, String, boolean, boolean) - Constructor for class dragon.matrix.DoubleSuperSparseMatrix

DoubleVector - Class in dragon.matrix.vector

Data structure for vector of double type

DoubleVector(int) - Constructor for class dragon.matrix.vector.DoubleVector

DoubleVector(double[]) - Constructor for class dragon.matrix.vector.DoubleVector

dragon.config - package dragon.config

dragon.ir.classification - package dragon.ir.classification

dragon.ir.classification.featureselection - package dragon.ir.classification.featureselection

dragon.ir.classification.multiclass - package dragon.ir.classification.multiclass

dragon.ir.clustering - package dragon.ir.clustering

dragon.ir.clustering.clustermodel - package dragon.ir.clustering.clustermodel

dragon.ir.clustering.docdistance - package dragon.ir.clustering.docdistance

dragon.ir.clustering.featurefilter - package dragon.ir.clustering.featurefilter

dragon.ir.index - package dragon.ir.index

dragon.ir.index.sentence - package dragon.ir.index.sentence

dragon.ir.index.sequence - package dragon.ir.index.sequence

dragon.ir.kngbase - package dragon.ir.kngbase

dragon.ir.query - package dragon.ir.query

dragon.ir.search - package dragon.ir.search

dragon.ir.search.evaluate - package dragon.ir.search.evaluate

dragon.ir.search.expand - package dragon.ir.search.expand

dragon.ir.search.feedback - package dragon.ir.search.feedback

dragon.ir.search.smooth - package dragon.ir.search.smooth

dragon.ir.summarize - package dragon.ir.summarize

dragon.ir.topicmodel - package dragon.ir.topicmodel

dragon.matrix - package dragon.matrix

dragon.matrix.factorize - package dragon.matrix.factorize

dragon.matrix.vector - package dragon.matrix.vector

dragon.ml.seqmodel.crf - package dragon.ml.seqmodel.crf

dragon.ml.seqmodel.data - package dragon.ml.seqmodel.data

dragon.ml.seqmodel.evaluate - package dragon.ml.seqmodel.evaluate

dragon.ml.seqmodel.feature - package dragon.ml.seqmodel.feature

dragon.ml.seqmodel.model - package dragon.ml.seqmodel.model

dragon.nlp - package dragon.nlp

dragon.nlp.compare - package dragon.nlp.compare

dragon.nlp.extract - package dragon.nlp.extract

dragon.nlp.ontology - package dragon.nlp.ontology

dragon.nlp.ontology.mesh - package dragon.nlp.ontology.mesh

dragon.nlp.ontology.umls - package dragon.nlp.ontology.umls

dragon.nlp.tool - package dragon.nlp.tool

dragon.nlp.tool.lemmatiser - package dragon.nlp.tool.lemmatiser

dragon.nlp.tool.xtract - package dragon.nlp.tool.xtract

dragon.onlinedb - package dragon.onlinedb

dragon.onlinedb.amazon - package dragon.onlinedb.amazon

dragon.onlinedb.bibtex - package dragon.onlinedb.bibtex

dragon.onlinedb.citeulike - package dragon.onlinedb.citeulike

dragon.onlinedb.dm - package dragon.onlinedb.dm

dragon.onlinedb.isi - package dragon.onlinedb.isi

dragon.onlinedb.pubmed - package dragon.onlinedb.pubmed

dragon.onlinedb.searchengine - package dragon.onlinedb.searchengine

dragon.onlinedb.trec - package dragon.onlinedb.trec

dragon.util - package dragon.util

DualConceptExtractor - Interface in dragon.nlp.extract

Interface of Dual Concept Extractor

DualConceptExtractorConfig - Class in dragon.config

Dual concept extraction configuration

DualConceptExtractorConfig() - Constructor for class dragon.config.DualConceptExtractorConfig

DualConceptExtractorConfig(ConfigureNode) - Constructor for class dragon.config.DualConceptExtractorConfig

DualConceptExtractorConfig(String) - Constructor for class dragon.config.DualConceptExtractorConfig

DualIndexer - Class in dragon.ir.index

The class handles two dimensional document language model indexing

DualIndexer(DualConceptExtractor, String, String) - Constructor for class dragon.ir.index.DualIndexer

DualIndexer(DualConceptExtractor, boolean, String, String) - Constructor for class dragon.ir.index.DualIndexer

DualIndexer(DualConceptExtractor, boolean, String, boolean, String) - Constructor for class dragon.ir.index.DualIndexer

DualSentenceIndexer - Class in dragon.ir.index.sentence

Two dimensional sentence indexer

DualSentenceIndexer(DualConceptExtractor, String, String) - Constructor for class dragon.ir.index.sentence.DualSentenceIndexer

DualSentenceIndexer(DualConceptExtractor, boolean, String, String) - Constructor for class dragon.ir.index.sentence.DualSentenceIndexer

DualSentenceIndexer(DualConceptExtractor, boolean, String, boolean, String) - Constructor for class dragon.ir.index.sentence.DualSentenceIndexer

DUC2004HTArticleParser - Class in dragon.onlinedb.trec

DUC 2004 HT article parser

DUC2004HTArticleParser() - Constructor for class dragon.onlinedb.trec.DUC2004HTArticleParser

DUC2004MTArticleParser - Class in dragon.onlinedb.trec

DUC 2004 MT article parser

DUC2004MTArticleParser() - Constructor for class dragon.onlinedb.trec.DUC2004MTArticleParser

E

EarlyTrecTopicReader - Class in dragon.onlinedb.trec

TREC topic reader earlier than 2004

EarlyTrecTopicReader(String) - Constructor for class dragon.onlinedb.trec.EarlyTrecTopicReader

Edge - Class in dragon.ml.seqmodel.model

Edge of model graph

Edge() - Constructor for class dragon.ml.seqmodel.model.Edge

Edge(int, int) - Constructor for class dragon.ml.seqmodel.model.Edge

edgeGen - Variable in class dragon.ml.seqmodel.crf.AbstractCRF

EdgeGenerator - Class in dragon.ml.seqmodel.crf

if the original label set is A (0), B (1), C (2), D (3) and markov order is 2, the new label set will be: AA, BA, CA, DA, AB, BB, CB, DB, AC, BC, CC, DC, DA, DB, DC, DD 0 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15

EdgeGenerator(int) - Constructor for class dragon.ml.seqmodel.crf.EdgeGenerator

EdgeGenerator(int, int) - Constructor for class dragon.ml.seqmodel.crf.EdgeGenerator

EdgeIterator - Interface in dragon.ml.seqmodel.model

Interface of Edge Iterator

eFetchUrl - Variable in class dragon.onlinedb.pubmed.PubMedQuery

enable() - Method in class dragon.ir.index.IRSection

enable_adjterm_option - Variable in class dragon.nlp.ontology.AbstractVocabulary

enable_AllSection - Variable in class dragon.ir.index.AbstractIndexer

enable_coordinate_option - Variable in class dragon.nlp.ontology.AbstractVocabulary

enable_lemma_option - Variable in class dragon.nlp.ontology.AbstractVocabulary

enable_npp_option - Variable in class dragon.nlp.ontology.AbstractVocabulary

enableAttributeCheckOption(AttributeChecker) - Method in class dragon.nlp.extract.AbstractTermExtractor

enableAttributeCheckOption(AttributeChecker) - Method in interface dragon.nlp.extract.TermExtractor

enableCompoundTermPredictOption(String) - Method in class dragon.nlp.extract.AbstractTermExtractor

enableCompoundTermPredictOption(String) - Method in interface dragon.nlp.extract.TermExtractor

Enable the option compound term prediction.

enabled() - Method in class dragon.ir.index.IRSection

endDate - Variable in class dragon.onlinedb.pubmed.PubMedQuery

endPos - Variable in class dragon.ml.seqmodel.feature.FeatureTypeWindow

engDate(String) - Static method in class dragon.util.Conversion

EngDocumentParser - Class in dragon.nlp.extract

Document Parser for English Text

EngDocumentParser() - Constructor for class dragon.nlp.extract.EngDocumentParser

EngDocumentParser(String) - Constructor for class dragon.nlp.extract.EngDocumentParser

engInt(String) - Static method in class dragon.util.Conversion

EngLemmatiser - Class in dragon.nlp.tool.lemmatiser

English lemmatiser which is adapted from WordNet

EngLemmatiser() - Constructor for class dragon.nlp.tool.lemmatiser.EngLemmatiser

EngLemmatiser(boolean, boolean) - Constructor for class dragon.nlp.tool.lemmatiser.EngLemmatiser

EngLemmatiser(String, boolean, boolean) - Constructor for class dragon.nlp.tool.lemmatiser.EngLemmatiser

EngWordPairExpand - Class in dragon.nlp.tool.xtract

Expanding word pair (not necessary consecutive) to noun phrase

EngWordPairExpand(int, String, double) - Constructor for class dragon.nlp.tool.xtract.EngWordPairExpand

EngWordPairGenerator - Class in dragon.nlp.tool.xtract

Generating word pairs (for noun phrases) from a given sentence according to max span range

EngWordPairGenerator(int) - Constructor for class dragon.nlp.tool.xtract.EngWordPairGenerator

EngWordPairIndexer - Class in dragon.nlp.tool.xtract

Indexer for word pair

EngWordPairIndexer(String, int, Tagger, Lemmatiser) - Constructor for class dragon.nlp.tool.xtract.EngWordPairIndexer

EngWordPairIndexer(String, int, Tagger, Lemmatiser, WordPairGenerator) - Constructor for class dragon.nlp.tool.xtract.EngWordPairIndexer

EnvVariable - Class in dragon.util

Getting windows environmental variable

EnvVariable() - Constructor for class dragon.util.EnvVariable

epsForConvergence - Variable in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

equals(Object) - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

equals(Object) - Method in class dragon.nlp.compare.AlphabetaComparator

equals(Object) - Method in class dragon.nlp.compare.ConceptEntryIDComparator

equals(Object) - Method in class dragon.nlp.compare.ConceptNameComparator

equals(Object) - Method in class dragon.nlp.compare.FrequencyComparator

equals(Object) - Method in class dragon.nlp.compare.IndexComparator

equals(Object) - Method in class dragon.nlp.compare.TermLemmaComparator

equals(Object) - Method in class dragon.nlp.SimplePair

equals(Object) - Method in class dragon.nlp.Token

equalTo(Concept) - Method in interface dragon.nlp.Concept

equalTo(Concept) - Method in class dragon.nlp.Phrase

equalTo(Concept) - Method in class dragon.nlp.Term

equalTo(Concept) - Method in class dragon.nlp.Token

equalTo(Triple) - Method in class dragon.nlp.Triple

eSearchUrl - Variable in class dragon.onlinedb.pubmed.PubMedQuery

estimateClassTransferProb(IRDoc[], int[]) - Method in class dragon.ir.clustering.LinkKMean

estimateModel(int) - Method in class dragon.ir.topicmodel.AspectModel

estimateModel(int[], int) - Method in class dragon.ir.topicmodel.AspectModel

estimateModel() - Method in class dragon.ir.topicmodel.CrossMixtureModel

estimateModel(int) - Method in class dragon.ir.topicmodel.GibbsLDA

estimateModel(int) - Method in class dragon.ir.topicmodel.SimpleMixtureModel

estimateModel(int[], int) - Method in class dragon.ir.topicmodel.SimpleMixtureModel

estimateModel(int) - Method in interface dragon.ir.topicmodel.TopicModel

Estimate the topic models

estimateModel(int, int) - Method in class dragon.ir.topicmodel.TwoDimensionEM

estimateModel(int, int) - Method in class dragon.ir.topicmodel.TwoDimensionGibbsLDA

estimateModel(int, int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

estimateModelCoefficient(RelSimpleQuery) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.AbstractFeedback

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.GenerativeFeedback

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.MinDivergenceFeedback

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.PhraseTransFeedback

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.RelationTransFeedback

estimateNewQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.RocchioFeedback

EuclideanClusterModel - Class in dragon.ir.clustering.clustermodel

Cluster model which computes Euclidean distance between a document and a cluster

EuclideanClusterModel(int, SparseMatrix) - Constructor for class dragon.ir.clustering.clustermodel.EuclideanClusterModel

EuclideanDocDistance - Class in dragon.ir.clustering.docdistance

Document similarity or distance based on Euclidean distance

EuclideanDocDistance(SparseMatrix) - Constructor for class dragon.ir.clustering.docdistance.EuclideanDocDistance

evaAgglomerativeClustering(ConfigureNode) - Method in class dragon.config.ClusteringEvaAppConfig

evaAgglomerativeClustering(Clustering, String, String, String) - Method in class dragon.config.ClusteringEvaAppConfig

evaAgglomerativeClustering(Clustering, SimpleElementList, String, String, String) - Method in class dragon.config.ClusteringEvaAppConfig

evaluate(ConfigureNode) - Method in class dragon.config.RetrievalEvaAppConfig

evaluate(Searcher, String, String, String, int, int, ArrayList) - Method in class dragon.config.RetrievalEvaAppConfig

evaluate(ConfigureNode) - Method in class dragon.config.SummarizationEvaAppConfig

evaluate(GenericMultiDocSummarizer, ArticleParser, String, String, String, int) - Method in class dragon.config.SummarizationEvaAppConfig

evaluate(int, int[], int[][]) - Method in class dragon.ir.classification.ClassificationEva

evaluate(DocClassSet, DocClassSet) - Method in class dragon.ir.classification.ClassificationEva

evaluate(DocClusterSet, DocClusterSet) - Method in class dragon.ir.clustering.ClusteringEva

evaluate(String, String[]) - Method in class dragon.ir.summarize.ROUGE

evaluate(Dataset, Dataset) - Method in interface dragon.ml.seqmodel.evaluate.Evaluator

Evalutes the machine-generated labels

evaluate(Dataset, Dataset) - Method in class dragon.ml.seqmodel.evaluate.TokenEvaluator

evaluateQuery(IRQuery, ArrayList, ArrayList) - Method in class dragon.ir.search.evaluate.TrecEva

evaluateQuery(IRQuery, ArrayList, ArrayList, IndexReader) - Method in class dragon.ir.search.evaluate.TrecEva

Evaluator - Interface in dragon.ml.seqmodel.evaluate

Interface of sequence labeling evaluator

evaPartitionClustering(ConfigureNode) - Method in class dragon.config.ClusteringEvaAppConfig

evaPartitionClustering(Clustering, String, int, String, String) - Method in class dragon.config.ClusteringEvaAppConfig

evaPartitionClustering(Clustering, SimpleElementList, String, int, String, String) - Method in class dragon.config.ClusteringEvaAppConfig

ExceptionOperation - Class in dragon.nlp.tool.lemmatiser

Exception operation class

ExceptionOperation(int, String) - Constructor for class dragon.nlp.tool.lemmatiser.ExceptionOperation

ExceptionWithIflag(int, String) - Constructor for exception dragon.ml.seqmodel.crf.LBFGS.ExceptionWithIflag

execute(Sentence) - Method in class dragon.nlp.extract.CoReference

execute(String) - Method in class dragon.nlp.tool.lemmatiser.ExceptionOperation

execute(String) - Method in interface dragon.nlp.tool.lemmatiser.Operation

Executes the operation to get the base form of the given word

execute(String) - Method in class dragon.nlp.tool.lemmatiser.SuffixDetachOperation

execute(String) - Method in class dragon.nlp.tool.lemmatiser.SuffixEDetachOperation

execute(String) - Method in class dragon.nlp.tool.lemmatiser.VerbOperation

execute() - Method in class dragon.nlp.tool.xtract.WordPairFilter

executeBatchQuery(Connection, String) - Static method in class dragon.util.DBUtil

executeQuery(Connection, String) - Static method in class dragon.util.DBUtil

exist(String) - Method in class dragon.config.BasicConfigureNode

exist(String) - Method in interface dragon.config.ConfigureNode

exist(String) - Static method in class dragon.util.FileUtil

exist(String) - Method in class dragon.util.SimpleDictionary

exp(double) - Static method in class dragon.util.MathUtil

expand(IRQuery) - Method in class dragon.ir.search.expand.InformationFlowQE

expand(IRQuery) - Method in interface dragon.ir.search.expand.QueryExpansion

expand(WordPairStat, int) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

expand(WordPairStat, int) - Method in interface dragon.nlp.tool.xtract.WordPairExpand

Expand the input word pair to a real phrase

expandSecion(int, int, int, boolean, int, ArrayList) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

exportDocLinkage(String, String) - Method in class dragon.ir.index.IndexConverter

exportIndex(String, String) - Method in class dragon.ir.index.IndexConverter

exportIndex(String, String, String) - Method in class dragon.ir.index.IndexConverter

exportMatrix(SimpleElementList, SimpleElementList, DoubleSparseMatrix, String) - Method in class dragon.ir.index.IndexConverter

exportMatrix(SimpleElementList, SimpleElementList, IntSparseMatrix, String) - Method in class dragon.ir.index.IndexConverter

exportMatrix(SimpleElementList, SimpleElementList, SparseMatrix, boolean, String) - Method in class dragon.ir.index.IndexConverter

Expression - Interface in dragon.ir.query

Interface of query expressions

EXPRESSION_BOOL - Static variable in interface dragon.ir.query.Expression

EXPRESSION_SIMPLE - Static variable in interface dragon.ir.query.Expression

expressionType - Variable in class dragon.ir.query.AbstractExpression

expressionType - Variable in class dragon.ir.query.AbstractPredicate

extract(String, ArrayList) - Method in class dragon.ir.index.AbstractIndexer

extract(String, ArrayList, ArrayList) - Method in class dragon.ir.index.AbstractIndexer

extract(String, ArrayList, ArrayList) - Method in class dragon.ir.index.BasicIndexer

extract(String, ArrayList) - Method in class dragon.ir.index.BasicIndexer

extract(String, ArrayList, ArrayList) - Method in class dragon.ir.index.OnlineIndexer

extract(String, ArrayList) - Method in class dragon.ir.index.OnlineIndexer

extract(double, double, double, double, String) - Method in class dragon.nlp.tool.xtract.SimpleXtract

extract(WordPairExpand, double, double, double, String) - Method in class dragon.nlp.tool.xtract.SimpleXtract

extractAbstract(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractBody(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractDate(String) - Method in class dragon.onlinedb.trec.LATimesArticleParser

extractDate(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractDocNo(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractEntities(String) - Method in class dragon.nlp.tool.Annie

extractEntities(String) - Method in interface dragon.nlp.tool.NER

Extract entities from a given text.

extractFromDoc(String) - Method in class dragon.nlp.extract.AbstractConceptExtractor

extractFromDoc(Document) - Method in class dragon.nlp.extract.AbstractConceptExtractor

extractFromDoc(Article) - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

extractFromDoc(String) - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

extractFromDoc(String) - Method in class dragon.nlp.extract.AbstractTripleExtractor

extractFromDoc(Document) - Method in class dragon.nlp.extract.AbstractTripleExtractor

extractFromDoc(String) - Method in class dragon.nlp.extract.BasicTokenExtractor

extractFromDoc(String) - Method in interface dragon.nlp.extract.ConceptExtractor

Extracts concepts from a raw document

extractFromDoc(Document) - Method in interface dragon.nlp.extract.ConceptExtractor

Extracts concepts from a parsed document

extractFromDoc(String) - Method in interface dragon.nlp.extract.DualConceptExtractor

Extracts concepts from a raw document

extractFromDoc(Document) - Method in interface dragon.nlp.extract.DualConceptExtractor

Extracts concepts from a parsed document

extractFromDoc(Article) - Method in interface dragon.nlp.extract.DualConceptExtractor

Extracts concepts from a semi-structured article

extractFromDoc(String) - Method in interface dragon.nlp.extract.TripleExtractor

Extracts triples from a raw document.

extractFromDoc(Document) - Method in interface dragon.nlp.extract.TripleExtractor

Extracts triples from a parsed document.

extractFromDoc(Document) - Method in class dragon.nlp.tool.Annie

extractFromDoc(Document) - Method in interface dragon.nlp.tool.NER

The return format is the same as the one by the method extractFromSentence.

extractFromSentence(Sentence) - Method in class dragon.nlp.extract.BasicPhraseExtractor

extractFromSentence(Sentence) - Method in class dragon.nlp.extract.BasicTermExtractor

extractFromSentence(Sentence) - Method in class dragon.nlp.extract.BasicTokenExtractor

extractFromSentence(Sentence) - Method in class dragon.nlp.extract.BasicTripleExtractor

extractFromSentence(Sentence) - Method in interface dragon.nlp.extract.ConceptExtractor

Extracts concepts from a sentence

extractFromSentence(Sentence) - Method in interface dragon.nlp.extract.DualConceptExtractor

Extracts concept from a sentence

extractFromSentence(Sentence) - Method in interface dragon.nlp.extract.TripleExtractor

Extracts triples from a sentence.

extractFromSentence(Sentence) - Method in class dragon.nlp.tool.Annie

extractFromSentence(Sentence) - Method in interface dragon.nlp.tool.NER

Difering from the method extractEntites, this method will save an entity in a term and thus all information such as entity type is kept.

extractLength(String) - Method in class dragon.onlinedb.trec.LATimesArticleParser

extractLength(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractMeta(String) - Method in class dragon.onlinedb.trec.LATimesArticleParser

extractMeta(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractor - Variable in class dragon.ir.index.DualIndexer

extractTermFromFile(String) - Method in class dragon.nlp.extract.AbstractTermExtractor

extractText(String) - Method in class dragon.util.HttpContent

extractTitle(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

extractTripleFromFile(String) - Method in class dragon.nlp.extract.BasicTripleExtractor

F

Factorization - Interface in dragon.matrix.factorize

Interface of matrix factorization

factorize(SparseMatrix, int) - Method in interface dragon.matrix.factorize.Factorization

Factorizes the given matrix

factorize(SparseMatrix, int) - Method in class dragon.matrix.factorize.NMF

factorize(SparseMatrix, int) - Method in class dragon.matrix.factorize.SVD

FastBinaryReader - Class in dragon.util

Fast binary data reader

FastBinaryReader(String) - Constructor for class dragon.util.FastBinaryReader

FastBinaryReader(File) - Constructor for class dragon.util.FastBinaryReader

FastBinaryReader(RandomAccessFile, long) - Constructor for class dragon.util.FastBinaryReader

FastBinaryWriter - Class in dragon.util

Fast binary data writer

FastBinaryWriter(String) - Constructor for class dragon.util.FastBinaryWriter

FastBinaryWriter(String, boolean) - Constructor for class dragon.util.FastBinaryWriter

FastFileInputStream - Class in dragon.util

Fast file input stream

FastFileInputStream(String) - Constructor for class dragon.util.FastFileInputStream

FastFileInputStream(File) - Constructor for class dragon.util.FastFileInputStream

FastFileInputStream(RandomAccessFile, long) - Constructor for class dragon.util.FastFileInputStream

Feature - Interface in dragon.ml.seqmodel.feature

A single feature returned by the FeatureGenerator needs to support this interface.

FEATURE - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

featureCollectingMode - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

FeatureDictionary - Interface in dragon.ml.seqmodel.feature

Interface of Feature Dictionary

FeatureDictionaryChar - Class in dragon.ml.seqmodel.feature

Character based feature dictionary

FeatureDictionaryChar(int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureDictionaryChar

FeatureDictionaryNum - Class in dragon.ml.seqmodel.feature

Numarical feature dictionary

FeatureDictionaryNum(int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureDictionaryNum

featureFilter - Variable in class dragon.ir.clustering.AbstractClustering

featureFilter - Variable in class dragon.ir.clustering.clustermodel.AbstractClusterModel

featureFilter - Variable in class dragon.ir.clustering.docdistance.AbstractDocDistance

FeatureFilter - Interface in dragon.ir.clustering.featurefilter

Interface of unsupervised feature selector for text clustering.

FeatureFilterConfig - Class in dragon.config

Feature filter configuration

FeatureFilterConfig() - Constructor for class dragon.config.FeatureFilterConfig

FeatureFilterConfig(ConfigureNode) - Constructor for class dragon.config.FeatureFilterConfig

FeatureFilterConfig(String) - Constructor for class dragon.config.FeatureFilterConfig

featureGenerator - Variable in class dragon.ml.seqmodel.crf.AbstractCRF

FeatureGenerator - Interface in dragon.ml.seqmodel.feature

Interface of Feature Generator

FeatureIdentifier - Class in dragon.ml.seqmodel.feature

Feature identifier

FeatureIdentifier(String, int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureIdentifier

FeatureIdentifier(String) - Constructor for class dragon.ml.seqmodel.feature.FeatureIdentifier

featureIter - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

featureMap - Variable in class dragon.ir.classification.featureselection.AbstractFeatureSelector

featureMap - Variable in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

featureMap - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

FeatureMap - Class in dragon.ml.seqmodel.feature

Feature map

FeatureMap() - Constructor for class dragon.ml.seqmodel.feature.FeatureMap

featureSelector - Variable in class dragon.ir.classification.AbstractClassifier

FeatureSelector - Interface in dragon.ir.classification.featureselection

Interface of feature selector which often work tegether with text classifiers.

FeatureSelectorConfig - Class in dragon.config

Feature selector configuration

FeatureSelectorConfig() - Constructor for class dragon.config.FeatureSelectorConfig

FeatureSelectorConfig(ConfigureNode) - Constructor for class dragon.config.FeatureSelectorConfig

FeatureSelectorConfig(String) - Constructor for class dragon.config.FeatureSelectorConfig

featureToReturn - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

FeatureType - Interface in dragon.ml.seqmodel.feature

Interface of feature type which is actually a factory generating certain type of features

FeatureTypeConcatRegex - Class in dragon.ml.seqmodel.feature

ConcatRegexFeatures generates features by matching the token with the character patterns.

FeatureTypeConcatRegex(int, int, int, String) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

Constructs an object of ConcatRegexFeatures to be used to generate features for the token sequence as specified.

FeatureTypeConcatRegex(int, int, int, String[][]) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

FeatureTypeConcatRegex(int, int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

FeatureTypeConcatRegex(int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

FeatureTypeConcatRegex(int, int, String) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

FeatureTypeEdge - Class in dragon.ml.seqmodel.feature

Feature type edge

FeatureTypeEdge(ModelGraph) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeEdge

FeatureTypeEnd - Class in dragon.ml.seqmodel.feature

Feature type for end

FeatureTypeEnd(ModelGraph) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeEnd

FeatureTypeKnownWord - Class in dragon.ml.seqmodel.feature

Feature type of known word

FeatureTypeKnownWord(FeatureDictionary) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeKnownWord

FeatureTypeKnownWord(FeatureDictionary, boolean) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeKnownWord

FeatureTypePosition - Class in dragon.ml.seqmodel.feature

This can be used as a wrapper around a FeatureType class that wants to generate features which take into account the normalized distance of the token to the start of a segement.

FeatureTypePosition(FeatureType) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypePosition

FeatureTypePOSPattern - Class in dragon.ml.seqmodel.feature

This feature type will create features about part of speech patterns for segments This feature type should be wrapped by FeatureTypeStateLoop.

FeatureTypePOSPattern(int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypePOSPattern

FeatureTypePOSPattern(int, int, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypePOSPattern

FeatureTypePrior - Class in dragon.ml.seqmodel.feature

This feature type prior

FeatureTypePrior(int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypePrior

FeatureTypeRegexCount - Class in dragon.ml.seqmodel.feature

This FeatureType can not be used independently because the label is not set.

FeatureTypeRegexCount(int, String) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

FeatureTypeRegexCount(int, String[][]) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

FeatureTypeRegexCount(int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

FeatureTypeSegmentLength - Class in dragon.ml.seqmodel.feature

This FeatureType can not be used independently because the label is not set.

FeatureTypeSegmentLength() - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

FeatureTypeSegmentLength(int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

FeatureTypeSegmentLengthPoly - Class in dragon.ml.seqmodel.feature

This FeatureType can not be used independently because the label is not set.

FeatureTypeSegmentLengthPoly(int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeSegmentLengthPoly

FeatureTypeStart - Class in dragon.ml.seqmodel.feature

The feature type for start

FeatureTypeStart(ModelGraph) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeStart

FeatureTypeStateLoop - Class in dragon.ml.seqmodel.feature

This can be used as a wrapper around a FeatureType class that wants to generate a feature for each state.

FeatureTypeStateLoop(FeatureType, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeStateLoop

FeatureTypeTokenLoop - Class in dragon.ml.seqmodel.feature

This can be used as a wrapper around a FeatureType class that wants to generate features for each token in a segment.

FeatureTypeTokenLoop(FeatureType) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeTokenLoop

FeatureTypeUnknownWord - Class in dragon.ml.seqmodel.feature

Feature type for unknown world

FeatureTypeUnknownWord(FeatureDictionary) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeUnknownWord

FeatureTypeUnknownWord(FeatureDictionary, boolean) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeUnknownWord

FeatureTypeWindow - Class in dragon.ml.seqmodel.feature

Window feature type

FeatureTypeWindow(Window[], FeatureType) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWindow

FeatureTypeWord - Class in dragon.ml.seqmodel.feature

World feature type

FeatureTypeWord(String, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWord

FeatureTypeWord(String, int, boolean) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWord

FeatureTypeWord(FeatureDictionary, int) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWord

FeatureTypeWord(FeatureDictionary, int, boolean) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWord

FeatureTypeWordScore - Class in dragon.ml.seqmodel.feature

These return one feature per state.

FeatureTypeWordScore(FeatureDictionary) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWordScore

FeatureTypeWordScore(FeatureDictionary, boolean) - Constructor for class dragon.ml.seqmodel.feature.FeatureTypeWordScore

featureVector - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

Feedback - Interface in dragon.ir.search.feedback

Interface of pseudo-relevance feedback method

feedbackCoeffi - Variable in class dragon.ir.search.feedback.AbstractFeedback

FeedbackConfig - Class in dragon.config

Feedback configuration

FeedbackConfig() - Constructor for class dragon.config.FeedbackConfig

FeedbackConfig(ConfigureNode) - Constructor for class dragon.config.FeedbackConfig

FeedbackConfig(String) - Constructor for class dragon.config.FeedbackConfig

feedbackDocNum - Variable in class dragon.ir.search.feedback.AbstractFeedback

FeedbackSearcher - Class in dragon.ir.search

Feedback searcher

FeedbackSearcher(Searcher, Feedback) - Constructor for class dragon.ir.search.FeedbackSearcher

FileIndex - Class in dragon.ir.index

The class is used to read according files storing indexing information.

FileIndex(String, boolean) - Constructor for class dragon.ir.index.FileIndex

FileUtil - Class in dragon.util

A convenient class for basic file utility operations

FileUtil() - Constructor for class dragon.util.FileUtil

filter(ArrayList) - Method in class dragon.nlp.extract.AbstractTermExtractor

finalize() - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

finalize() - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

finalize() - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

finalized - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

finalizeData() - Method in class dragon.ir.kngbase.HALSpace

finalizeData(boolean) - Method in class dragon.matrix.AbstractFlatSparseMatrix

finalizeData(boolean) - Method in class dragon.matrix.AbstractGiantSparseMatrix

finalizeData() - Method in class dragon.matrix.AbstractSparseMatrix

finalizeData(boolean) - Method in class dragon.matrix.AbstractSuperSparseMatrix

finalizeData() - Method in interface dragon.matrix.SparseMatrix

It is equal to calling finalizeData(true)

finalizeData(boolean) - Method in interface dragon.matrix.SparseMatrix

Any sparse matrix has two possible modes, writing mode and reading mode.

findAllTerms(Word) - Method in class dragon.nlp.ontology.BasicOntology

findAllTerms(Word, Word) - Method in class dragon.nlp.ontology.BasicOntology

findAllTerms(Word) - Method in interface dragon.nlp.ontology.Ontology

Finds out all terms beginning with the given word

findAllTerms(Word, Word) - Method in interface dragon.nlp.ontology.Ontology

Finds out all terms between the starting word and the ending word.

findAllTerms(Word) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

findAllTerms(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

findAllTerms(Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

findAllTerms(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

findPhrase(Word) - Method in class dragon.nlp.ontology.BasicVocabulary

findPhrase(Word) - Method in class dragon.nlp.ontology.ChineseVocabulary

findPhrase(Word) - Method in interface dragon.nlp.ontology.Vocabulary

Finds out the phrase beging with the given word.

findTerm(Word) - Method in class dragon.nlp.ontology.BasicOntology

findTerm(Word, Word) - Method in class dragon.nlp.ontology.BasicOntology

findTerm(Word) - Method in interface dragon.nlp.ontology.Ontology

Finds the longest term starting with the given word.

findTerm(Word, Word) - Method in interface dragon.nlp.ontology.Ontology

Finds the longest term starting with given word and ending no later than the given word.

findTerm(Word) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

findTerm(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

findTerm(Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

findTerm(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

first(int) - Method in class dragon.ml.seqmodel.crf.EdgeGenerator

firstConceptList - Variable in class dragon.nlp.extract.AbstractDualConceptExtractor

firstEmpty - Variable in class dragon.matrix.AbstractSuperSparseMatrix

firstLabel(int) - Method in class dragon.ml.seqmodel.crf.EdgeGenerator

FIRSTPOS - Static variable in interface dragon.nlp.tool.Lemmatiser

FIRSTPOS - Static variable in interface dragon.nlp.tool.WordNetUtil

firstUseConcept - Variable in class dragon.ir.index.DualIndexer

firstWriter - Variable in class dragon.ir.index.DualIndexer

FlatSegmentReader - Class in dragon.ml.seqmodel.data

Flat segment reader

FlatSegmentReader(int, int, String, LabelConverter) - Constructor for class dragon.ml.seqmodel.data.FlatSegmentReader

FlatSegmentReader(int, int, String) - Constructor for class dragon.ml.seqmodel.data.FlatSegmentReader

FlatSegmentWriter - Class in dragon.ml.seqmodel.data

Storing segment information in a flat manner

FlatSegmentWriter(String, LabelConverter) - Constructor for class dragon.ml.seqmodel.data.FlatSegmentWriter

flush() - Method in class dragon.ir.index.BasicIndexWriteController

flush() - Method in class dragon.ir.index.BasicIndexWriter

flush() - Method in interface dragon.ir.index.IndexWriter

For disk-based indexing, this method dump all information in memory to the files on disk.

flush() - Method in class dragon.ir.index.OnlineIndexWriter

flush() - Method in class dragon.ir.index.sentence.BasicSentenceWriteController

flush() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

flush() - Method in class dragon.matrix.AbstractFlatSparseMatrix

flush() - Method in class dragon.matrix.AbstractGiantSparseMatrix

flush() - Method in class dragon.matrix.AbstractSuperSparseMatrix

flush() - Method in interface dragon.matrix.SparseMatrix

Many implementations of sparse matrix cache cells in memory.

flush() - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

flush() - Method in interface dragon.nlp.tool.xtract.WordPairIndexer

flush() - Method in class dragon.util.FastBinaryWriter

flushInterval - Variable in class dragon.matrix.AbstractGiantSparseMatrix

flushInterval - Variable in class dragon.matrix.AbstractSuperSparseMatrix

flushInterval - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

FormatUtil - Class in dragon.util

Utility class for decimal format

FormatUtil() - Constructor for class dragon.util.FormatUtil

freezeFeatures() - Method in class dragon.ml.seqmodel.feature.FeatureMap

FrequencyComparator - Class in dragon.nlp.compare

Comparing frequency of two objects

FrequencyComparator() - Constructor for class dragon.nlp.compare.FrequencyComparator

FrequencyComparator(boolean) - Constructor for class dragon.nlp.compare.FrequencyComparator

FrequencySortable - Interface in dragon.nlp.compare

Interface for frequency-sortable objects

fromByteArray(byte[]) - Method in interface dragon.matrix.Cell

Read the cell score from the byte array.

fromByteArray(byte[]) - Method in class dragon.matrix.DoubleCell

fromByteArray(byte[]) - Method in class dragon.matrix.IntCell

fromString(String) - Method in interface dragon.matrix.Cell

Read the cell score from the input string

fromString(String) - Method in class dragon.matrix.DoubleCell

fromString(String) - Method in class dragon.matrix.IntCell

ftype - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

FullRankSearcher - Class in dragon.ir.search

Full rank searcher

FullRankSearcher(IndexReader, Smoother) - Constructor for class dragon.ir.search.FullRankSearcher

FullRankSearcher(IndexReader, Smoother, boolean) - Constructor for class dragon.ir.search.FullRankSearcher

G

genCooccurrenceMatrix(IntSparseMatrix) - Method in class dragon.matrix.AbstractSparseMatrix

genCooccurrenceMatrix(SparseMatrix, IntSparseMatrix) - Method in class dragon.matrix.AbstractSparseMatrix

genCooccurrenceMatrix(SparseMatrix, int, IntSparseMatrix) - Method in class dragon.matrix.AbstractSparseMatrix

genCooccurrenceMatrix(IntSparseMatrix) - Method in interface dragon.matrix.SparseMatrix

The cell (i,j) in the output cooccurrence matrix stores the cooccurrence count of the i-th row and the j-th row.

genCooccurrenceMatrix(SparseMatrix, IntSparseMatrix) - Method in interface dragon.matrix.SparseMatrix

The cell (i,j) in the output cooccurrence matrix stores the cooccurrence count of the i-th row in the current matrix and the j-th row in the matrixY.

genCooccurrenceMatrix(SparseMatrix, int, IntSparseMatrix) - Method in interface dragon.matrix.SparseMatrix

The cell (i,j) in the output cooccurrence matrix stores the cooccurrence count of the i-th row in the current matrix and the j-th row in the matrixY.

generate(IntSparseMatrix, IntSparseMatrix, String, String) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

generate(IntSparseMatrix, int[], IntSparseMatrix, int[], String, String) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

generate(IntSparseMatrix, String, String) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

generate(IntSparseMatrix, int[], String, String) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

generate(String) - Method in class dragon.ir.query.AbstractQueryGenerator

generate(Article) - Method in class dragon.ir.query.BasicQueryGenerator

generate(Article) - Method in class dragon.ir.query.PhraseQEGenerator

generate(Article) - Method in interface dragon.ir.query.QueryGenerator

generate(String) - Method in interface dragon.ir.query.QueryGenerator

generate(Sentence) - Method in class dragon.nlp.tool.xtract.EngWordPairGenerator

generate(Sentence) - Method in interface dragon.nlp.tool.xtract.WordPairGenerator

generateCooccurrenceMatrix(ConfigureNode) - Method in class dragon.config.CooccurrenceAppConfig

generateCooccurrenceMatrix(IntSparseMatrix, String, IntSparseMatrix, String, String, String, int, int, int) - Method in class dragon.config.CooccurrenceAppConfig

generateCooccurrenceMatrix(IntSparseMatrix, String, String, String, int, int, int) - Method in class dragon.config.CooccurrenceAppConfig

generateIRRelationList(ArrayList) - Method in class dragon.ir.index.AbstractIndexWriteController

generateIRTermList(ArrayList) - Method in class dragon.ir.index.AbstractIndexWriteController

generateQuery(ConfigureNode) - Method in class dragon.config.QueryAppConfig

generateQuery(QueryGenerator, CollectionReader, String) - Method in class dragon.config.QueryAppConfig

generateVocabulary(String, int, String) - Method in class dragon.config.PhraseExtractAppConfig

GenerativeFeedback - Class in dragon.ir.search.feedback

Model-based Feedback

GenerativeFeedback(Searcher, int, int, double, double) - Constructor for class dragon.ir.search.feedback.GenerativeFeedback

GenericModel - Class in dragon.ml.seqmodel.model

Generic model graph

GenericModel(String, int) - Constructor for class dragon.ml.seqmodel.model.GenericModel

GenericModel(int, int) - Constructor for class dragon.ml.seqmodel.model.GenericModel

GenericMultiDocSummarizer - Interface in dragon.ir.summarize

Interface of Generic Multi-Document Summarizer

genIndexFile(String) - Method in class dragon.matrix.SparseMatrixFactory

genModelMatrix(ConfigureNode) - Method in class dragon.config.DocRepresentationAppConfig

genModelMatrix(IndexReader, DoubleSparseMatrix, double, double, boolean, double, String, String) - Method in class dragon.ir.kngbase.DocRepresentation

genModelMatrix(IndexReader, int[], DoubleSparseMatrix, double, double, boolean, double, String, String) - Method in class dragon.ir.kngbase.DocRepresentation

genModelMatrix(IndexReader, DoubleSparseMatrix, double, double, boolean, double) - Method in class dragon.ir.kngbase.DocRepresentation

genModelMatrix(IndexReader, int[], DoubleSparseMatrix, double, double, boolean, double) - Method in class dragon.ir.kngbase.DocRepresentation

genNormTFMatrix(ConfigureNode) - Method in class dragon.config.DocRepresentationAppConfig

genNormTFMatrix(String, String) - Method in class dragon.ir.kngbase.DocRepresentation

genNormTFMatrix() - Method in class dragon.ir.kngbase.DocRepresentation

Genomics2004TopicReader - Class in dragon.onlinedb.trec

Genomics 2005 topic reader

Genomics2004TopicReader(String) - Constructor for class dragon.onlinedb.trec.Genomics2004TopicReader

Genomics2005TopicReader - Class in dragon.onlinedb.trec

Genomics 2005 topic reader

Genomics2005TopicReader(String) - Constructor for class dragon.onlinedb.trec.Genomics2005TopicReader

genPositiveMatrix(int, int) - Method in class dragon.matrix.factorize.AbstractFactorization

genRelationDocMatrix(String) - Method in class dragon.ir.index.TransposeIRMatrix

genSignatureTranslation(int) - Method in class dragon.ir.kngbase.TopicSignatureModel

genSimilarityMatrix(String, double) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

genStateVector(DoubleDenseMatrix, double[], double[], boolean) - Method in class dragon.ml.seqmodel.crf.AbstractTrainer

genStateVectorLog(DoubleDenseMatrix, double[], double[], boolean) - Method in class dragon.ml.seqmodel.crf.AbstractTrainer

genTermDocMatrix(String) - Method in class dragon.ir.index.TransposeIRMatrix

genTFIDFMatrix(ConfigureNode) - Method in class dragon.config.DocRepresentationAppConfig

genTFIDFMatrix(String, String) - Method in class dragon.ir.kngbase.DocRepresentation

genTFIDFMatrix() - Method in class dragon.ir.kngbase.DocRepresentation

genTranslationMatrix(IntSparseMatrix, DoubleSparseMatrix) - Static method in class dragon.matrix.AbstractSparseMatrix

genTransMatrix(int, String, String) - Method in class dragon.ir.kngbase.TopicSignatureModel

get(int) - Method in class dragon.ir.index.BasicIRDocIndexList

get(int) - Method in class dragon.ir.index.BasicIRRelationIndexList

get(int) - Method in class dragon.ir.index.BasicIRTermIndexList

get(int) - Method in interface dragon.ir.index.IRDocIndexList

Gets the IRDoc specified by its index

get(int) - Method in interface dragon.ir.index.IRRelationIndexList

Gets the IRRelation object specified by its index

get(int) - Method in interface dragon.ir.index.IRTermIndexList

Gets the IRTerm object specified by the index

get(int) - Method in class dragon.ir.index.OnlineIRDocIndexList

get(int) - Method in class dragon.ir.index.OnlineIRRelationIndexList

get(int) - Method in class dragon.ir.index.OnlineIRTermIndexList

get(String) - Method in class dragon.ir.index.sentence.OnlineSentenceBase

get(int, int) - Method in class dragon.matrix.DoubleFlatSparseMatrix

get(int) - Method in class dragon.matrix.vector.DoubleVector

get(int) - Method in class dragon.matrix.vector.IntVector

get() - Method in class dragon.nlp.extract.Abbreviation

get(String) - Method in class dragon.nlp.extract.Abbreviation

get(int) - Method in class dragon.nlp.SimplePairList

get(int) - Method in class dragon.nlp.tool.xtract.WordPairStatList

get(String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

get(String) - Method in class dragon.util.HttpUtil

get(String, String) - Method in class dragon.util.HttpUtil

getAbbreviationOption() - Method in class dragon.nlp.extract.AbstractTermExtractor

getAbbreviationOption() - Method in interface dragon.nlp.extract.TermExtractor

Gets the option of checking terms in abbreviation.

getAbstract() - Method in interface dragon.onlinedb.Article

getAbstract() - Method in class dragon.onlinedb.BasicArticle

getAbstract() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getAbstractTag() - Method in class dragon.onlinedb.trec.SgmArticleParser

getAccessCon(String) - Static method in class dragon.util.DBUtil

getAdjectivePhraseOption() - Method in class dragon.nlp.ontology.AbstractVocabulary

getAdjectivePhraseOption() - Method in class dragon.nlp.ontology.ChineseVocabulary

getAdjectivePhraseOption() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the option whether adjective phrase is allowed.

getAdjectiveTermOption() - Method in class dragon.nlp.ontology.AbstractOntology

getAdjectiveTermOption() - Method in interface dragon.nlp.ontology.Ontology

Gets the option whether adjective term is allowed.

getAllCUI() - Method in class dragon.nlp.ontology.BasicTerm

getAllSTY() - Method in class dragon.nlp.ontology.umls.UmlsCUI

getAncestors(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getArticle(int) - Method in class dragon.onlinedb.AbstractQuery

getArticle() - Method in class dragon.onlinedb.AbstractQuery

getArticle(int) - Method in class dragon.onlinedb.amazon.AmazonCatalogQuery

getArticle(int) - Method in class dragon.onlinedb.amazon.AmazonReviewQuery

getArticle() - Method in interface dragon.onlinedb.ArticleQuery

read out the article the current pointer points to.

getArticle(int) - Method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

getArticle(int) - Method in class dragon.onlinedb.pubmed.PubMedQuery

getArticle(int) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getArticle(WebLink, boolean) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getArticleByKey(String) - Method in class dragon.onlinedb.amazon.AmazonCatalogQuery

getArticleByKey(String) - Method in class dragon.onlinedb.amazon.AmazonReviewQuery

getArticleByKey(String) - Method in class dragon.onlinedb.ArrayCollectionReader

getArticleByKey(String) - Method in class dragon.onlinedb.BasicCollectionReader

getArticleByKey(String) - Method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

getArticleByKey(String) - Method in interface dragon.onlinedb.CollectionReader

Reads out the article according to its key

getArticleByKey(String) - Method in class dragon.onlinedb.pubmed.PubMedQuery

getArticleByKey(String) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getArticleByKey(String) - Method in class dragon.onlinedb.SimpleCollectionReader

getArticleByKey(String) - Method in class dragon.onlinedb.trec.AbstractTopicReader

getArticleByKey(String) - Method in class dragon.onlinedb.trec.TrecCollectionReader

getArticleByKey(String) - Method in class dragon.onlinedb.trec.TrecFileReader

getArticleContent(Article) - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

getArticleFilename() - Method in class dragon.onlinedb.trec.TrecCollectionReader

getArticleFilename() - Method in class dragon.onlinedb.trec.TrecFileReader

getArticleKey() - Method in class dragon.onlinedb.AbstractQuery

getArticleKey() - Method in interface dragon.onlinedb.ArticleQuery

In some cases, retrieval of an article is very expensive.

getArticleLength() - Method in class dragon.onlinedb.trec.TrecCollectionReader

getArticleLength() - Method in class dragon.onlinedb.trec.TrecFileReader

getArticleOffset() - Method in class dragon.onlinedb.trec.TrecCollectionReader

getArticleOffset() - Method in class dragon.onlinedb.trec.TrecFileReader

getArticleParser(String) - Method in class dragon.config.CollectionReaderConfig

getArticleParser() - Method in class dragon.onlinedb.AbstractQuery

getArticleParser() - Method in class dragon.onlinedb.ArrayCollectionReader

getArticleParser() - Method in class dragon.onlinedb.BasicCollectionReader

getArticleParser() - Method in class dragon.onlinedb.BasicCollectionWriter

getArticleParser() - Method in interface dragon.onlinedb.CollectionReader

Gets the article parser of the collection reader

getArticleParser() - Method in interface dragon.onlinedb.CollectionWriter

Gets the article parser of the collection writer

getArticleParser() - Method in class dragon.onlinedb.SimpleCollectionReader

getArticleParser() - Method in class dragon.onlinedb.trec.AbstractTopicReader

getArticleParser() - Method in class dragon.onlinedb.trec.TrecCollectionReader

getArticleParser() - Method in class dragon.onlinedb.trec.TrecFileReader

getAssociatedConcept() - Method in class dragon.nlp.Word

getAttribute(int) - Method in class dragon.nlp.Term

getAttributeCheckOption() - Method in class dragon.nlp.extract.AbstractTermExtractor

getAttributeCheckOption() - Method in interface dragon.nlp.extract.TermExtractor

getAttributeNum() - Method in class dragon.nlp.Term

getAttributeOccurrence() - Method in class dragon.nlp.Term

getAuthorityVector() - Method in class dragon.matrix.vector.HITS

getAutoRefresh() - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getAutoRefresh() - Method in class dragon.util.HttpUtil

getAveragePrecision() - Method in class dragon.ir.search.evaluate.TrecEva

getAvgValue() - Method in class dragon.matrix.vector.DoubleVector

getAvgValue() - Method in class dragon.matrix.vector.IntVector

getBackgroundCoefficient() - Method in class dragon.ir.classification.SemanticNBClassifier

getBackgroundCoefficient() - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

getBaseColumn() - Method in class dragon.matrix.AbstractMatrix

getBaseColumn() - Method in interface dragon.matrix.Matrix

The index of the first column in a matrix is zero.

getBaseRow() - Method in class dragon.matrix.AbstractMatrix

getBaseRow() - Method in interface dragon.matrix.Matrix

The index of the first row in a matrix is zero.

getBasicSmoother() - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

getBasicSmoother() - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

getBestSolution(DataSequence, int) - Method in interface dragon.ml.seqmodel.crf.Labeler

Gets the order-th solution.

getBestSolution(DataSequence, int) - Method in class dragon.ml.seqmodel.crf.ViterbiBasicLabeler

getBestSolution(DataSequence, int) - Method in class dragon.ml.seqmodel.crf.ViterbiSegmentLabeler

getBeta() - Method in class dragon.ir.summarize.ROUGE

getBkgModel(IndexReader) - Method in class dragon.ir.topicmodel.AbstractModel

getBody() - Method in interface dragon.onlinedb.Article

getBody() - Method in class dragon.onlinedb.BasicArticle

getBody() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getBodyContent(String, int) - Method in class dragon.onlinedb.trec.CoarseSgmArticleParser

One can override this method to exclude some noisy tags.

getBodyTag() - Method in class dragon.onlinedb.trec.SgmArticleParser

getBoolean(String) - Method in class dragon.config.BasicConfigureNode

getBoolean(String, boolean) - Method in class dragon.config.BasicConfigureNode

getBoolean(String) - Method in interface dragon.config.ConfigureNode

getBoolean(String, boolean) - Method in interface dragon.config.ConfigureNode

getByteScore() - Method in interface dragon.matrix.Cell

getByteScore() - Method in class dragon.matrix.DoubleCell

getByteScore() - Method in class dragon.matrix.IntCell

getCacheSize() - Method in class dragon.ir.index.BasicIRRelationIndexList

getCacheSize() - Method in class dragon.ir.kngbase.CooccurrenceGenerator

getCacheSize() - Method in class dragon.nlp.tool.xtract.WordPairStatList

getCandidateCUI() - Method in class dragon.nlp.Term

getCandidateCUI(int) - Method in class dragon.nlp.Term

getCandidateCUINum() - Method in class dragon.nlp.Term

getCandidateTUI() - Method in class dragon.nlp.Term

getCandidateTUI(int) - Method in class dragon.nlp.Term

getCandidateTUI() - Method in class dragon.nlp.Triple

getCandidateTUI(int) - Method in class dragon.nlp.Triple

getCandidateTUINum() - Method in class dragon.nlp.Term

getCandidateTUINum() - Method in class dragon.nlp.Triple

getCaseOption() - Method in class dragon.ir.summarize.ROUGE

getCategory() - Method in class dragon.ir.index.IRDoc

getCategory() - Method in interface dragon.onlinedb.Article

Gets the label of the article

getCategory() - Method in class dragon.onlinedb.BasicArticle

getCategory() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getCell(int, int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getCell(int, int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

getCell(int, int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

getCell(int) - Method in class dragon.matrix.DoubleRow

getCell(int) - Method in class dragon.matrix.IntRow

getCell(int) - Method in interface dragon.matrix.Row

If the specified cell does not exist, it returns null.

getCell(int, int) - Method in interface dragon.matrix.SparseMatrix

If the specified cell doesn't exist, this method will return null.

getCellDataLength() - Method in class dragon.matrix.AbstractMatrix

getCellDataLength() - Static method in class dragon.matrix.DoubleCell

getCellDataLength() - Static method in class dragon.matrix.IntCell

getCellDataLength() - Method in interface dragon.matrix.Matrix

For double matrix, this method returns 8; for integer matrix, it returns 4.

getCellDataLength() - Method in class dragon.matrix.SparseMatrixFactory

getChangeTo() - Method in class dragon.nlp.tool.lemmatiser.SuffixDetachOperation

getCharSet() - Static method in class dragon.util.EnvVariable

getCharSet() - Method in class dragon.util.HttpUtil

Gets the charset name of the last web page one access.

getChild(int) - Method in class dragon.ir.query.AbstractIRQuery

getChild(int) - Method in class dragon.ir.query.AbstractPredicate

getChild(int) - Method in class dragon.ir.query.BoolExpression

getChild(int) - Method in interface dragon.ir.query.Expression

This method returns null for simple expressions.

getChild(int) - Method in interface dragon.ir.query.IRQuery

getChild(int) - Method in class dragon.ir.query.SimpleExpression

getChildNum() - Method in class dragon.ir.query.AbstractIRQuery

getChildNum() - Method in class dragon.ir.query.AbstractPredicate

getChildNum() - Method in class dragon.ir.query.BoolExpression

getChildNum() - Method in interface dragon.ir.query.Expression

This method returns zero for simple expressions.

getChildNum() - Method in interface dragon.ir.query.IRQuery

getChildNum() - Method in class dragon.ir.query.SimpleExpression

getClassID() - Method in class dragon.ir.classification.DocClass

getClassifierNum() - Method in class dragon.ir.classification.multiclass.AbstractCodeMatrix

getClassifierNum() - Method in interface dragon.ir.classification.multiclass.CodeMatrix

Gets the number of binary classifiers

getClassLabel(int) - Method in class dragon.ir.classification.AbstractClassifier

getClassLabel(int) - Method in interface dragon.ir.classification.Classifier

Gets the label of a given document category

getClassName() - Method in class dragon.ir.classification.DocClass

getClassNum() - Method in class dragon.ir.classification.DocClassSet

getClassNum() - Method in class dragon.ir.classification.multiclass.AbstractCodeMatrix

getClassNum() - Method in interface dragon.ir.classification.multiclass.CodeMatrix

Gets the number of categories

getClassPrior(DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getClassPrior(DocClassSet) - Method in class dragon.ir.classification.NBClassifier

getClauseID() - Method in class dragon.nlp.Word

getClauseIdentifyOption() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getClauseIdentifyOption() - Method in interface dragon.nlp.extract.TripleExtractor

Gets the option of extracting triples within a clause window.

getCluster(int) - Method in class dragon.ir.clustering.AbstractClustering

getCluster(int) - Method in interface dragon.ir.clustering.Clustering

One should call the cluster method before calling this method.

getClusterID() - Method in class dragon.ir.clustering.DocCluster

getClustering(int) - Method in class dragon.config.ClusteringConfig

getClustering(ConfigureNode, int) - Method in class dragon.config.ClusteringConfig

getClusterLexRankSummarizer(ConfigureNode) - Static method in class dragon.ir.summarize.ClusterLexRankSummarizer

getClusterModel(int) - Method in class dragon.config.ClusterModelConfig

getClusterModel(ConfigureNode, int) - Method in class dragon.config.ClusterModelConfig

getClusterName() - Method in class dragon.ir.clustering.DocCluster

getClusterNum() - Method in class dragon.ir.clustering.AbstractClustering

getClusterNum() - Method in interface dragon.ir.clustering.Clustering

getClusterNum() - Method in class dragon.ir.clustering.clustermodel.AbstractClusterModel

getClusterNum() - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

getClusterNum() - Method in class dragon.ir.clustering.DocClusterSet

getClusterSet() - Method in class dragon.ir.clustering.AbstractClustering

getClusterSet() - Method in class dragon.ir.clustering.BisectKMean

getClusterSet() - Method in interface dragon.ir.clustering.Clustering

One should call the cluster method before calling this method.

getCode(int, int) - Method in class dragon.ir.classification.multiclass.AllPairCodeMatrix

getCode(int, int) - Method in interface dragon.ir.classification.multiclass.CodeMatrix

Gets the code value for specified category and binary classifier

getCode(int, int) - Method in class dragon.ir.classification.multiclass.OVACodeMatrix

getCodeMatrix(int) - Method in class dragon.config.CodeMatrixConfig

getCodeMatrix(ConfigureNode, int) - Method in class dragon.config.CodeMatrixConfig

getCollection() - Method in class dragon.ir.index.AbstractIndexReader

getCollection() - Method in interface dragon.ir.index.IndexReader

getCollection() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getCollectionFilename() - Method in class dragon.ir.index.FileIndex

getCollectionFileSize() - Method in class dragon.onlinedb.BasicArticleIndex

getCollectionReader(int) - Method in class dragon.config.CollectionReaderConfig

getCollectionReader(ConfigureNode, int) - Method in class dragon.config.CollectionReaderConfig

getColumn() - Method in interface dragon.matrix.Cell

getColumn() - Method in class dragon.matrix.DoubleCell

getColumn() - Method in class dragon.matrix.IntCell

getColumnKeyList() - Method in class dragon.ir.kngbase.BasicKnowledgeBase

getColumnKeyList() - Method in class dragon.ir.kngbase.HALSpace

getColumnKeyList() - Method in interface dragon.ir.kngbase.KnowledgeBase

getColumnSum(int) - Method in interface dragon.matrix.DoubleDenseMatrix

getColumnSum(int) - Method in class dragon.matrix.DoubleFlatDenseMatrix

getColumnSum(int) - Method in class dragon.matrix.DoubleFlatSparseMatrix

getColumnSum(int) - Method in class dragon.matrix.DoubleGiantSparseMatrix

getColumnSum(int) - Method in class dragon.matrix.DoubleSuperSparseMatrix

getColumnSum(int) - Method in interface dragon.matrix.IntDenseMatrix

getColumnSum(int) - Method in class dragon.matrix.IntFlatDenseMatrix

getColumnSum(int) - Method in class dragon.matrix.IntFlatSparseMatrix

getColumnSum(int) - Method in class dragon.matrix.IntGiantSparseMatrix

getColumnSum(int) - Method in class dragon.matrix.IntSuperSparseMatrix

getCommonModels() - Method in class dragon.ir.topicmodel.CrossMixtureModel

getCommonParent(String, String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getCommonTopic(int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getCommonTopic(int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getComparator() - Method in class dragon.util.SortedArray

getComponentValue(SimpleTermPredicate, int, double[]) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

getComponentValue(IRDoc, int, double[]) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

getComponentValue(IRDoc, int, double[]) - Method in class dragon.ir.search.smooth.DocTransMixtureWeightEM

getComponentValue(SimpleTermPredicate, int, double[]) - Method in class dragon.ir.search.smooth.DocTransMixtureWeightEM

getCompoundTermPredictOption() - Method in class dragon.nlp.extract.AbstractTermExtractor

getCompoundTermPredictOption() - Method in interface dragon.nlp.extract.TermExtractor

Gets the option of predicting compound terms.

getConceptExtractor(int) - Method in class dragon.config.ConceptExtractorConfig

getConceptExtractor(ConfigureNode, int) - Method in class dragon.config.ConceptExtractorConfig

getConceptExtractor() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getConceptExtractor() - Method in interface dragon.nlp.extract.TripleExtractor

Gets the concept extractor used for triple extraction

getConceptFilter(int) - Method in class dragon.config.ConceptFilterConfig

getConceptFilter(ConfigureNode, int) - Method in class dragon.config.ConceptFilterConfig

getConceptFilter() - Method in class dragon.nlp.extract.AbstractConceptExtractor

getConceptFilter() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getConceptFilter() - Method in interface dragon.nlp.extract.ConceptExtractor

Gets the concept filter used for this extractor.

getConceptFilter() - Method in interface dragon.nlp.extract.TripleExtractor

Gets the concept filter used for this extractor.

getConceptList() - Method in class dragon.nlp.extract.AbstractConceptExtractor

getConceptList() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getConceptList() - Method in interface dragon.nlp.extract.ConceptExtractor

getConceptList() - Method in interface dragon.nlp.extract.TripleExtractor

Gets concept list

getConceptType() - Method in interface dragon.nlp.Concept

Return 1 for ontological term, 2 for multiword phrase, and 3 for token

getConceptType() - Method in class dragon.nlp.Phrase

getConceptType() - Method in class dragon.nlp.Term

getConceptType() - Method in class dragon.nlp.Token

getConfigureNode(ConfigureNode, String, int) - Method in class dragon.config.ConfigUtil

getConnection() - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

getConnectionTimeout() - Method in class dragon.util.HttpUtil

getConstraint() - Method in class dragon.ir.query.AbstractPredicate

getConstraint() - Method in interface dragon.ir.query.Predicate

getContent() - Method in class dragon.ml.seqmodel.data.BasicToken

getContent() - Method in class dragon.nlp.Word

getCooccurrenceCount(int, int) - Method in class dragon.matrix.AbstractDenseMatrix

getCooccurrenceCount(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getCooccurrenceCount(int, int) - Method in interface dragon.matrix.Matrix

If two cells in the same column have non-zero scores, they will be counted as co-occurred.

getCoordinateOption() - Method in class dragon.nlp.ontology.AbstractOntology

getCoordinateOption() - Method in class dragon.nlp.ontology.AbstractVocabulary

getCoordinateOption() - Method in class dragon.nlp.ontology.ChineseVocabulary

getCoordinateOption() - Method in interface dragon.nlp.ontology.Ontology

Gets the option whether a term can contain a conjunction.

getCoordinateOption() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the option whether a phrase can contain a conjunction.

getCoordinatingCheckOption() - Method in class dragon.nlp.extract.AbstractTermExtractor

getCoordinatingCheckOption() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getCoordinatingCheckOption() - Method in interface dragon.nlp.extract.TermExtractor

Gets the option of checking the coordinating terms

getCoordinatingCheckOption() - Method in interface dragon.nlp.extract.TripleExtractor

getCoordinatingTermPredictOption() - Method in class dragon.nlp.extract.AbstractTermExtractor

getCoordinatingTermPredictOption() - Method in interface dragon.nlp.extract.TermExtractor

Gets the option of predicting terms according to coordinating relationship.

getCoReferenceOption() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getCoReferenceOption() - Method in interface dragon.nlp.extract.TripleExtractor

getCount(Object) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getCount(int, int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getCount(int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getCount(Object) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getCount(int) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getCount(int, int) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getCount() - Method in class dragon.nlp.Counter

getCUI(String) - Method in class dragon.nlp.ontology.BasicOntology

getCUI(Word, Word) - Method in class dragon.nlp.ontology.BasicOntology

getCUI(int) - Method in class dragon.nlp.ontology.BasicTerm

getCUI(String) - Method in interface dragon.nlp.ontology.Ontology

Gets all possible concept ids the specified term has

getCUI(Word, Word) - Method in interface dragon.nlp.ontology.Ontology

Gets all possible concept ids the specified term has

getCUI(String) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getCUI(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getCUI() - Method in class dragon.nlp.ontology.umls.UmlsCUI

getCUI(String) - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

getCUI(String) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

getCUI(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

getCUI(String) - Method in class dragon.nlp.ontology.umls.UmlsFileBackedOntology

getCUI() - Method in class dragon.nlp.Term

getCUINum() - Method in class dragon.nlp.ontology.BasicTerm

getCurPageNo() - Method in class dragon.onlinedb.AbstractQuery

getCurPageNo() - Method in interface dragon.onlinedb.ArticleQuery

getCurPageWidth() - Method in class dragon.onlinedb.AbstractQuery

getCurPageWidth() - Method in interface dragon.onlinedb.ArticleQuery

getDate() - Method in interface dragon.onlinedb.Article

getDate() - Method in class dragon.onlinedb.BasicArticle

getDate() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getDB2Connection(String, String, String, String) - Static method in class dragon.util.DBUtil

getDefaultEncoding() - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getDepth(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getDescendant(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getDescendantNum() - Method in class dragon.nlp.ontology.mesh.MeshNode

getDescendantNum(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getDescription() - Method in class dragon.nlp.ontology.umls.UmlsSTY

getDictionary() - Method in class dragon.nlp.tool.WordNetDidion

getDimWithMaxValue() - Method in class dragon.matrix.vector.DoubleVector

getDimWithMaxValue() - Method in class dragon.matrix.vector.IntVector

getDirectory() - Method in class dragon.ir.index.FileIndex

getDistance(IRDoc, DocCluster) - Method in class dragon.ir.clustering.clustermodel.AbstractClusterModel

getDistance(IRDoc, DocCluster) - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

getDistance(IRDoc, int) - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

getDistance(IRDoc, int) - Method in class dragon.ir.clustering.clustermodel.CosineClusterModel

getDistance(IRDoc, int) - Method in class dragon.ir.clustering.clustermodel.EuclideanClusterModel

getDistance(IRDoc, int) - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

getDistance(IRDoc, IRDoc) - Method in class dragon.ir.clustering.docdistance.CosineDocDistance

getDistance(IRDoc, IRDoc) - Method in interface dragon.ir.clustering.docdistance.DocDistance

getDistance(IRDoc, IRDoc) - Method in class dragon.ir.clustering.docdistance.EuclideanDocDistance

getDistance(IRDoc, IRDoc) - Method in class dragon.ir.clustering.docdistance.KLDivDocDistance

getDoc(int) - Method in class dragon.ir.classification.DocClass

getDoc(int) - Method in class dragon.ir.clustering.DocCluster

getDoc(int) - Method in class dragon.ir.index.AbstractIndexReader

getDoc(String) - Method in class dragon.ir.index.AbstractIndexReader

getDoc(int) - Method in interface dragon.ir.index.IndexReader

getDoc(String) - Method in interface dragon.ir.index.IndexReader

getDoc(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getDoc(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getDoc(int) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

getDocClass(int) - Method in class dragon.ir.classification.DocClassSet

getDocCluster(int) - Method in class dragon.ir.clustering.DocClusterSet

getDocDistance(int) - Method in class dragon.config.DocDistanceConfig

getDocDistance(ConfigureNode, int) - Method in class dragon.config.DocDistanceConfig

getDocFrequency() - Method in class dragon.ir.index.IRRelation

getDocFrequency() - Method in interface dragon.ir.index.IRSignature

getDocFrequency() - Method in class dragon.ir.index.IRTerm

getDocFrequency() - Method in class dragon.ir.query.SimpleTermPredicate

getDocIndexList() - Method in class dragon.ir.index.OnlineIndexer

getDocIndexList() - Method in class dragon.ir.index.OnlineIndexWriteController

getDocIndexList() - Method in class dragon.ir.index.OnlineIndexWriter

getDocIndexList() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getDocIndexList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexer

getDocIndexList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

getDocIndexListFilename() - Method in class dragon.ir.index.FileIndex

getDocKey(int) - Method in class dragon.ir.index.AbstractIndexReader

getDocKey(int) - Method in interface dragon.ir.index.IndexReader

getDocKey(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getDocKeyList() - Method in class dragon.ir.index.OnlineIndexer

getDocKeyList() - Method in class dragon.ir.index.OnlineIndexWriteController

getDocKeyList() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getDocKeyList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexer

getDocKeyList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

getDocKeyListFilename() - Method in class dragon.ir.index.FileIndex

getDocMemberships() - Method in class dragon.ir.topicmodel.CrossMixtureModel

getDocNoTag() - Method in class dragon.onlinedb.trec.SgmArticleParser

getDocNum() - Method in class dragon.ir.classification.DocClass

getDocNum() - Method in class dragon.ir.clustering.DocCluster

getDocNum() - Method in class dragon.ir.index.IRCollection

getDocNum() - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

getDocNum() - Method in class dragon.ir.topicmodel.AbstractTopicModel

getDocNum() - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getDocNum() - Method in interface dragon.ir.topicmodel.TopicModel

getDocNum() - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getDocRelationFilename() - Method in class dragon.ir.index.FileIndex

getDocRelationIndexFilename() - Method in class dragon.ir.index.FileIndex

getDocRelationMatrix() - Method in class dragon.ir.index.AbstractIndexReader

getDocRelationMatrix() - Method in class dragon.ir.index.OnlineIndexer

getDocRelationMatrix() - Method in class dragon.ir.index.OnlineIndexWriteController

getDocRelationMatrix() - Method in class dragon.ir.index.OnlineIndexWriter

getDocRelationMatrix() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getDocSet() - Method in class dragon.ir.clustering.DocCluster

getDocTermFilename() - Method in class dragon.ir.index.FileIndex

getDocTermIndexFilename() - Method in class dragon.ir.index.FileIndex

getDocTermMatrix() - Method in class dragon.ir.classification.AbstractClassifier

getDocTermMatrix() - Method in class dragon.ir.index.AbstractIndexReader

getDocTermMatrix() - Method in class dragon.ir.index.OnlineIndexer

getDocTermMatrix() - Method in class dragon.ir.index.OnlineIndexWriteController

getDocTermMatrix() - Method in class dragon.ir.index.OnlineIndexWriter

getDocTermMatrix() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getDocTermSeqFilename() - Method in class dragon.ir.index.FileIndex

getDocTermSeqIndexFilename() - Method in class dragon.ir.index.FileIndex

getDocTopics(int) - Method in class dragon.ir.topicmodel.AbstractTopicModel

getDocTopics(int, int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getDocTopics(int) - Method in interface dragon.ir.topicmodel.TopicModel

getDocTopics(int, int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getDocument(Article) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

getDocumentParser(int) - Method in class dragon.config.DocumentParserConfig

getDocumentParser(ConfigureNode, int) - Method in class dragon.config.DocumentParserConfig

getDocumentParser() - Method in class dragon.nlp.extract.AbstractConceptExtractor

getDocumentParser() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

getDocumentParser() - Method in interface dragon.nlp.extract.ConceptExtractor

Gets document parser.

getDocumentParser() - Method in interface dragon.nlp.extract.DualConceptExtractor

Gets document parser.

getDocumentParser() - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

getDocumentParser() - Method in interface dragon.nlp.tool.xtract.WordPairIndexer

getDocViews(int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getDocViews(int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getDominantVectorThreshold() - Method in class dragon.ir.search.expand.InformationFlowQE

getDominantVectorThreshold() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getDominantVectorWeight() - Method in class dragon.ir.search.expand.InformationFlowQE

getDominantVectorWeight() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getDouble(String) - Method in class dragon.config.BasicConfigureNode

getDouble(String, double) - Method in class dragon.config.BasicConfigureNode

getDouble(String) - Method in interface dragon.config.ConfigureNode

getDouble(String, double) - Method in interface dragon.config.ConfigureNode

getDouble(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getDouble(int, int) - Method in class dragon.matrix.DoubleFlatDenseMatrix

getDouble(int, int) - Method in class dragon.matrix.DoubleGiantSparseMatrix

getDouble(int) - Method in class dragon.matrix.DoubleRow

getDouble(int, int) - Method in class dragon.matrix.DoubleSuperSparseMatrix

getDouble(int, int) - Method in class dragon.matrix.IntFlatDenseMatrix

getDouble(int, int) - Method in interface dragon.matrix.Matrix

Return the score stored in the specified cell.

getDoubleScore() - Method in interface dragon.matrix.Cell

getDoubleScore() - Method in class dragon.matrix.DoubleCell

getDoubleScore() - Method in class dragon.matrix.IntCell

getDoubleSparseMatrix(int) - Method in class dragon.config.SparseMatrixConfig

getDoubleSparseMatrix(ConfigureNode, int) - Method in class dragon.config.SparseMatrixConfig

getDragonHome() - Static method in class dragon.util.EnvVariable

getDualConceptExtractor(int) - Method in class dragon.config.DualConceptExtractorConfig

getDualConceptExtractor(ConfigureNode, int) - Method in class dragon.config.DualConceptExtractorConfig

getEdgeIterator() - Method in class dragon.ml.seqmodel.model.CompleteModel

getEdgeIterator() - Method in class dragon.ml.seqmodel.model.GenericModel

getEdgeIterator() - Method in interface dragon.ml.seqmodel.model.ModelGraph

getEdgeIterator() - Method in class dragon.ml.seqmodel.model.NestedModel

getEdgeIterator() - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getEdgeNum() - Method in class dragon.ml.seqmodel.model.CompleteModel

getEdgeNum() - Method in class dragon.ml.seqmodel.model.GenericModel

getEdgeNum() - Method in interface dragon.ml.seqmodel.model.ModelGraph

getEdgeNum() - Method in class dragon.ml.seqmodel.model.NestedModel

getEdgeNum() - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getEigenVector(SparseMatrix) - Method in class dragon.matrix.vector.PowerMethod

Get the largest eigenvector which satisifies p=(dU+(1-d)M)'*p

getEigenVector(DenseMatrix) - Method in class dragon.matrix.vector.PowerMethod

getEMBackgroundCoefficient() - Method in class dragon.ir.kngbase.TopicSignatureModel

getEMIterationNum() - Method in class dragon.ir.kngbase.TopicSignatureModel

getEnd() - Method in class dragon.ml.seqmodel.model.Edge

getEndingWord() - Method in interface dragon.nlp.Concept

Gets the last word of the concept.

getEndingWord() - Method in class dragon.nlp.Phrase

getEndingWord() - Method in class dragon.nlp.Term

getEndingWord() - Method in class dragon.nlp.Token

getEndState(int) - Method in class dragon.ml.seqmodel.model.CompleteModel

getEndState(int) - Method in class dragon.ml.seqmodel.model.GenericModel

getEndState(int) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the index-th ending state.

getEndState(int) - Method in class dragon.ml.seqmodel.model.NestedModel

getEndState(int) - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getEndStateNum() - Method in class dragon.ml.seqmodel.model.CompleteModel

getEndStateNum() - Method in class dragon.ml.seqmodel.model.GenericModel

getEndStateNum() - Method in interface dragon.ml.seqmodel.model.ModelGraph

getEndStateNum() - Method in class dragon.ml.seqmodel.model.NestedModel

getEndStateNum() - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getEntropy() - Method in class dragon.ir.clustering.ClusteringEva

getEntryID() - Method in interface dragon.nlp.Concept

getEntryID() - Method in class dragon.nlp.Phrase

getEntryID() - Method in class dragon.nlp.Term

getEntryID() - Method in class dragon.nlp.Token

getEntryID() - Method in class dragon.nlp.Word

getEnv() - Static method in class dragon.util.EnvVariable

getEnv(String) - Static method in class dragon.util.EnvVariable

getExternalLabelID(int) - Method in class dragon.ml.seqmodel.data.BasicLabelConverter

getExternalLabelID(int) - Method in interface dragon.ml.seqmodel.data.LabelConverter

Converts internal integer-based labels to external integer-based labels

getExternalLabelString(int) - Method in class dragon.ml.seqmodel.data.BasicLabelConverter

getExternalLabelString(int) - Method in interface dragon.ml.seqmodel.data.LabelConverter

Converts internal integer-based labels to external string-based labels

getFeatureFilter(int) - Method in class dragon.config.FeatureFilterConfig

getFeatureFilter(ConfigureNode, int) - Method in class dragon.config.FeatureFilterConfig

getFeatureFilter() - Method in class dragon.ir.clustering.AbstractClustering

getFeatureFilter() - Method in interface dragon.ir.clustering.Clustering

getFeatureFilter() - Method in class dragon.ir.clustering.clustermodel.AbstractClusterModel

getFeatureFilter() - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

getFeatureFilter() - Method in class dragon.ir.clustering.docdistance.AbstractDocDistance

getFeatureFilter() - Method in interface dragon.ir.clustering.docdistance.DocDistance

getFeatureGenerator() - Method in class dragon.ml.seqmodel.crf.AbstractCRF

getFeatureGenerator() - Method in interface dragon.ml.seqmodel.crf.Labeler

Gets the feature generator

getFeatureGenerator() - Method in interface dragon.ml.seqmodel.crf.Trainer

Gets the feature generator

getFeatureName(int) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

getFeatureName(int) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

getFeatureNum() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

getFeatureNum() - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

getFeatureNum() - Method in class dragon.ml.seqmodel.feature.FeatureMap

getFeatureSelector(int) - Method in class dragon.config.FeatureSelectorConfig

getFeatureSelector(ConfigureNode, int) - Method in class dragon.config.FeatureSelectorConfig

getFeatureSelector() - Method in class dragon.ir.classification.AbstractClassifier

getFeatureSelector() - Method in interface dragon.ir.classification.Classifier

getFeatureTYpe(int) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

getFeatureType(int) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

getFeatureTYpe(int) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Gets the index-th feature type

getFeatureTypeNum() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

getFeatureTypeNum() - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Gets the number of wanted feature types.

getFeedback(int) - Method in class dragon.config.FeedbackConfig

getFeedback(ConfigureNode, int) - Method in class dragon.config.FeedbackConfig

getFeedback() - Method in class dragon.ir.search.FeedbackSearcher

getFeedbackDocNum() - Method in class dragon.ir.search.feedback.AbstractFeedback

getFeedbackDocNum() - Method in interface dragon.ir.search.feedback.Feedback

getField() - Method in class dragon.ir.query.SimpleExpression

getField() - Method in class dragon.ir.query.SimpleTermPredicate

getFileIndex() - Method in class dragon.onlinedb.BasicArticleKey

getFilename(int) - Method in class dragon.onlinedb.BasicArticleIndex

getFilePointer() - Method in class dragon.util.FastBinaryWriter

getFilteringOption() - Method in class dragon.nlp.extract.AbstractConceptExtractor

getFilteringOption() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getFilteringOption() - Method in interface dragon.nlp.extract.ConceptExtractor

Tests if the extractor applies concept filtering.

getFilteringOption() - Method in interface dragon.nlp.extract.TripleExtractor

Tests if the extractor applies concept filtering.

getFirstChild() - Method in class dragon.config.BasicConfigureNode

getFirstChild() - Method in interface dragon.config.ConfigureNode

Gets the first object node within the current configuration node

getFirstConcept() - Method in class dragon.nlp.Triple

getFirstConceptList() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

getFirstConceptList() - Method in interface dragon.nlp.extract.DualConceptExtractor

Gets the first set of concepts extracted before

getFirstElement() - Method in class dragon.nlp.SimplePair

getFirstParagraph() - Method in class dragon.nlp.Document

getFirstSentence() - Method in class dragon.nlp.Paragraph

getFirstSubjectWord() - Method in class dragon.nlp.Sentence

getFirstTerm() - Method in class dragon.ir.index.IRRelation

getFirstTermPredicate() - Method in class dragon.ir.query.SimpleRelationPredicate

getFirstWord() - Method in class dragon.nlp.Sentence

getFirstWord() - Method in class dragon.nlp.tool.xtract.WordPairStat

getFrequency() - Method in class dragon.ir.index.IRRelation

getFrequency() - Method in interface dragon.ir.index.IRSignature

getFrequency() - Method in class dragon.ir.index.IRTerm

getFrequency() - Method in class dragon.ir.query.SimpleTermPredicate

getFrequency() - Method in interface dragon.nlp.compare.FrequencySortable

getFrequency() - Method in interface dragon.nlp.Concept

getFrequency() - Method in class dragon.nlp.ontology.mesh.MeshNode

getFrequency() - Method in class dragon.nlp.Phrase

getFrequency() - Method in class dragon.nlp.Term

getFrequency() - Method in class dragon.nlp.Token

getFrequency(int) - Method in class dragon.nlp.tool.xtract.WordPairStat

getFrequency() - Method in class dragon.nlp.Triple

getFrequency() - Method in class dragon.nlp.Word

getFscore(int) - Method in class dragon.ir.classification.ClassificationEva

getFScore() - Method in class dragon.ir.clustering.ClusteringEva

getFScore() - Method in class dragon.ir.summarize.ROUGE

getGenericMultiDocSummarizer(int) - Method in class dragon.config.SummarizerConfig

getGenericMultiDocSummarizer(ConfigureNode, int) - Method in class dragon.config.SummarizerConfig

getGeometryNMI() - Method in class dragon.ir.clustering.ClusteringEva

getGram() - Method in class dragon.ir.summarize.ROUGE

getHALMatrix() - Method in class dragon.ir.kngbase.HALSpace

getHALWindowSize() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getHashCapacity() - Static method in class dragon.nlp.SimplePair

getHier() - Method in class dragon.nlp.ontology.umls.UmlsSTY

getHierarchy(String) - Method in interface dragon.nlp.ontology.SemanticNet

Gete the hierarchy description fo the given semantic type or relation

getHierarchy(String) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

getHost() - Method in class dragon.onlinedb.searchengine.WebLink

getHost() - Method in class dragon.util.HttpUtil

getHubVector() - Method in class dragon.matrix.vector.HITS

getID() - Method in class dragon.ml.seqmodel.feature.BasicFeature

getID() - Method in interface dragon.ml.seqmodel.feature.Feature

One can quickly find out the index of the current feature according to its unique identifier

getId() - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

getId(FeatureIdentifier) - Method in class dragon.ml.seqmodel.feature.FeatureMap

getIdentifier(int) - Method in class dragon.ml.seqmodel.feature.FeatureMap

getIndex() - Method in class dragon.ir.index.IRDoc

getIndex() - Method in class dragon.ir.index.IRRelation

getIndex() - Method in interface dragon.ir.index.IRSignature

getIndex() - Method in class dragon.ir.index.IRTerm

getIndex() - Method in class dragon.ir.query.SimpleTermPredicate

getIndex() - Method in class dragon.ir.summarize.TextUnit

getIndex() - Method in class dragon.ml.seqmodel.data.BasicToken

getIndex(Object) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getIndex() - Method in class dragon.ml.seqmodel.feature.BasicFeature

getIndex() - Method in interface dragon.ml.seqmodel.feature.Feature

The index of this feature from 0..numFeatures-1.

getIndex(Object) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getIndex(Object) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

getIndex(Object) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

getIndex() - Method in interface dragon.nlp.compare.IndexSortable

getIndex() - Method in interface dragon.nlp.Concept

getIndex() - Method in class dragon.nlp.Document

getIndex() - Method in class dragon.nlp.ontology.BasicTerm

getIndex() - Method in class dragon.nlp.ontology.umls.UmlsCUI

getIndex() - Method in class dragon.nlp.ontology.umls.UmlsSTY

getIndex() - Method in class dragon.nlp.Paragraph

getIndex() - Method in class dragon.nlp.Phrase

getIndex() - Method in class dragon.nlp.Sentence

getIndex() - Method in class dragon.nlp.SimpleElement

getIndex() - Method in class dragon.nlp.SimplePair

getIndex() - Method in class dragon.nlp.Term

getIndex() - Method in class dragon.nlp.Token

getIndex() - Method in class dragon.nlp.tool.xtract.WordPairStat

getIndex() - Method in class dragon.nlp.Triple

getIndex() - Method in class dragon.nlp.Word

getIndexer(int) - Method in class dragon.config.IndexerConfig

getIndexer(ConfigureNode, int) - Method in class dragon.config.IndexerConfig

getIndexFilename() - Method in class dragon.matrix.AbstractGiantSparseMatrix

getIndexFilename() - Method in class dragon.matrix.AbstractSuperSparseMatrix

getIndexList() - Method in class dragon.nlp.tool.lemmatiser.LemmatiserPOS

getIndexLookupOption() - Method in class dragon.nlp.tool.lemmatiser.ExceptionOperation

getIndexLookupOption() - Method in interface dragon.nlp.tool.lemmatiser.Operation

Gets the option of checking the existence of the lemmatised word in the dictionary.

getIndexLookupOption() - Method in class dragon.nlp.tool.lemmatiser.SuffixDetachOperation

getIndexLookupOption() - Method in class dragon.nlp.tool.lemmatiser.SuffixEDetachOperation

getIndexLookupOption() - Method in class dragon.nlp.tool.lemmatiser.VerbOperation

getIndexReader(int) - Method in class dragon.config.IndexReaderConfig

getIndexReader(ConfigureNode, int) - Method in class dragon.config.IndexReaderConfig

getIndexReader() - Method in class dragon.ir.classification.AbstractClassifier

getIndexReader() - Method in interface dragon.ir.classification.Classifier

getIndexReader() - Method in class dragon.ir.clustering.AbstractClustering

getIndexReader() - Method in interface dragon.ir.clustering.Clustering

getIndexReader() - Method in class dragon.ir.index.IRSection

getIndexReader() - Method in class dragon.ir.search.AbstractSearcher

getIndexReader() - Method in interface dragon.ir.search.Searcher

getIndexReader() - Method in class dragon.ir.summarize.AbstractStructureSum

getIndexReader() - Method in interface dragon.ir.summarize.StructureSummarizer

getIndexWriter() - Method in class dragon.ir.index.IRSection

getInfrequentTermThreshold() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getInt(String) - Method in class dragon.config.BasicConfigureNode

getInt(String, int) - Method in class dragon.config.BasicConfigureNode

getInt(String) - Method in interface dragon.config.ConfigureNode

getInt(String, int) - Method in interface dragon.config.ConfigureNode

getInt(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getInt(int, int) - Method in class dragon.matrix.DoubleFlatDenseMatrix

getInt(int, int) - Method in class dragon.matrix.IntFlatDenseMatrix

getInt(int, int) - Method in class dragon.matrix.IntGiantSparseMatrix

getInt(int) - Method in class dragon.matrix.IntRow

getInt(int, int) - Method in class dragon.matrix.IntSuperSparseMatrix

getInt(int, int) - Method in interface dragon.matrix.Matrix

Return the score stored in the specified cell.

getInternalLabel(int) - Method in class dragon.ml.seqmodel.data.BasicLabelConverter

getInternalLabel(String) - Method in class dragon.ml.seqmodel.data.BasicLabelConverter

getInternalLabel(int) - Method in interface dragon.ml.seqmodel.data.LabelConverter

Converts external integer-based labels to internal integer-based labels

getInternalLabel(String) - Method in interface dragon.ml.seqmodel.data.LabelConverter

Converts external string-based labels to internal integer-based labels

getIntScore() - Method in interface dragon.matrix.Cell

getIntScore() - Method in class dragon.matrix.DoubleCell

getIntScore() - Method in class dragon.matrix.IntCell

getIntSparseMatrix(int) - Method in class dragon.config.SparseMatrixConfig

getIntSparseMatrix(ConfigureNode, int) - Method in class dragon.config.SparseMatrixConfig

getIRCollection() - Method in class dragon.ir.index.OnlineIndexer

getIRCollection() - Method in class dragon.ir.index.OnlineIndexWriteController

getIRCollection() - Method in class dragon.ir.index.OnlineIndexWriter

getIRCollection() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getIRCollection() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexer

getIRCollection() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

getIRCollectionStat(int) - Method in class dragon.config.IndexReaderConfig

getIRCollectionStat(ConfigureNode, int) - Method in class dragon.config.IndexReaderConfig

getIRDoc(int) - Method in class dragon.ir.search.AbstractSearcher

getIRDoc(int) - Method in interface dragon.ir.search.Searcher

Before calling this method, one should call the search function.

getIRRelation(int) - Method in class dragon.ir.index.AbstractIndexReader

getIRRelation(int, int) - Method in class dragon.ir.index.AbstractIndexReader

getIRRelation(int) - Method in interface dragon.ir.index.IndexReader

getIRRelation(int, int) - Method in interface dragon.ir.index.IndexReader

If the given document does not contain the given relation, this method returns null.

getIRRelation(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getIRRelation(int, int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getIRRelationArray(ArrayList, IRDoc) - Method in class dragon.ir.index.AbstractIndexWriteController

getIRSignature(int) - Method in class dragon.ir.index.BasicIRRelationIndexList

getIRSignature(int) - Method in class dragon.ir.index.BasicIRTermIndexList

getIRSignature(int) - Method in interface dragon.ir.index.IRSignatureIndexList

getIRSignature(int) - Method in class dragon.ir.index.OnlineIRRelationIndexList

getIRSignature(int) - Method in class dragon.ir.index.OnlineIRTermIndexList

getIRTerm(int) - Method in class dragon.ir.index.AbstractIndexReader

getIRTerm(String) - Method in class dragon.ir.index.AbstractIndexReader

getIRTerm(int, int) - Method in class dragon.ir.index.AbstractIndexReader

getIRTerm(String) - Method in interface dragon.ir.index.IndexReader

getIRTerm(int) - Method in interface dragon.ir.index.IndexReader

getIRTerm(int, int) - Method in interface dragon.ir.index.IndexReader

If the given document does not contain the given term, this method returns null.

getIRTerm(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getIRTerm(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getIRTerm(int, int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getIRTermArray(ArrayList, IRDoc) - Method in class dragon.ir.index.AbstractIndexWriteController

getIterationNum() - Method in class dragon.ir.topicmodel.AbstractModel

getKey() - Method in class dragon.ir.index.IRDoc

getKey() - Method in class dragon.ir.index.IRTerm

getKey() - Method in class dragon.ir.query.SimpleTermPredicate

getKey() - Method in class dragon.nlp.SimpleElement

getKey() - Method in interface dragon.onlinedb.Article

The unique string-based entry number of an article.

getKey() - Method in class dragon.onlinedb.BasicArticle

getKey() - Method in class dragon.onlinedb.BasicArticleKey

getKey() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getKnowledgeBase(int) - Method in class dragon.config.KnowledgeBaseConfig

getKnowledgeBase(ConfigureNode, int) - Method in class dragon.config.KnowledgeBaseConfig

getKnowledgeMatrix() - Method in class dragon.ir.kngbase.BasicKnowledgeBase

getKnowledgeMatrix() - Method in class dragon.ir.kngbase.HALSpace

getKnowledgeMatrix() - Method in interface dragon.ir.kngbase.KnowledgeBase

A knowledge matrix saves the semantic relationships between various concepts.

getLabel(int) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

getLabel() - Method in class dragon.ml.seqmodel.data.BasicToken

getLabel(int) - Method in interface dragon.ml.seqmodel.data.DataSequence

Gets the label of the token in the given position

getLabel() - Method in class dragon.ml.seqmodel.feature.BasicFeature

getLabel() - Method in interface dragon.ml.seqmodel.feature.Feature

has to be a label index from 0..numLabels-1

getLabel(int) - Method in class dragon.ml.seqmodel.model.CompleteModel

getLabel(int) - Method in class dragon.ml.seqmodel.model.GenericModel

getLabel(int) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the label of the state.

getLabel(int) - Method in class dragon.ml.seqmodel.model.NestedModel

getLabel(int) - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getLabeler() - Method in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

getLabeler() - Method in class dragon.ml.seqmodel.crf.CollinsSegmentTrainer

getLabelNum() - Method in class dragon.ml.seqmodel.data.BasicDataset

getLabelNum() - Method in interface dragon.ml.seqmodel.data.Dataset

Gets the number of unique labels.

getLabelNum() - Method in class dragon.ml.seqmodel.model.AbstractModel

getLabelNum() - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the number of unique labels.

getLastParagraph() - Method in class dragon.nlp.Document

getLastSentence() - Method in class dragon.nlp.Paragraph

getLastSubjectWord() - Method in class dragon.nlp.Sentence

getLastWord() - Method in class dragon.nlp.Sentence

getLeftMatrix() - Method in interface dragon.matrix.factorize.Factorization

Gets the left matrix

getLeftMatrix() - Method in class dragon.matrix.factorize.NMF

getLeftMatrix() - Method in class dragon.matrix.factorize.SVD

Return the left singular vectors

getLemma(Word) - Method in class dragon.nlp.ontology.AbstractOntology

getLemma(Word) - Method in class dragon.nlp.ontology.AbstractVocabulary

getLemma() - Method in class dragon.nlp.Word

getLemmaOption() - Method in class dragon.nlp.ontology.AbstractOntology

getLemmaOption() - Method in class dragon.nlp.ontology.AbstractVocabulary

getLemmaOption() - Method in class dragon.nlp.ontology.ChineseVocabulary

getLemmaOption() - Method in interface dragon.nlp.ontology.Ontology

Gets the option of using the base form of the word when matching a term.

getLemmaOption() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the option of using the base form of the word when matching a phrase.

getLemmatiser(int) - Method in class dragon.config.LemmatiserConfig

getLemmatiser(ConfigureNode, int) - Method in class dragon.config.LemmatiserConfig

getLemmatiser() - Method in class dragon.ir.summarize.ROUGE

getLemmatiser() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

getLemmatiser() - Method in class dragon.nlp.extract.AbstractTermExtractor

getLemmatiser() - Method in class dragon.nlp.extract.AbstractTokenExtractor

getLemmatiser() - Method in interface dragon.nlp.extract.ConceptExtractor

Gets the lemmtiser used for this extractor.

getLemmatiserOption() - Method in class dragon.ir.summarize.ROUGE

getLength() - Method in interface dragon.onlinedb.Article

getLength() - Method in class dragon.onlinedb.BasicArticle

getLength() - Method in class dragon.onlinedb.BasicArticleKey

getLength() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getListSortedByIndex() - Method in class dragon.nlp.ontology.umls.UmlsCUIList

getLoadFactor() - Method in class dragon.matrix.AbstractRow

getLoadFactor() - Method in interface dragon.matrix.Row

getLogLikelihood(IRDoc, int, DoubleDenseMatrix, double[], double[]) - Method in class dragon.ir.clustering.LinkKMean

getLogLikelihoodOption() - Method in class dragon.ir.search.smooth.AbstractSmoother

getLogLikelihoodOption() - Method in interface dragon.ir.search.smooth.Smoother

getLongScore() - Method in interface dragon.matrix.Cell

getLongScore() - Method in class dragon.matrix.DoubleCell

getLongScore() - Method in class dragon.matrix.IntCell

getLossFunction(int) - Method in class dragon.config.LossFunctionConfig

getLossFunction(ConfigureNode, int) - Method in class dragon.config.LossFunctionConfig

getMacroFScore() - Method in class dragon.ir.classification.ClassificationEva

getMacroPrecision() - Method in class dragon.ir.classification.ClassificationEva

getMacroRecall() - Method in class dragon.ir.classification.ClassificationEva

getMainHeading(int) - Method in class dragon.onlinedb.pubmed.PubMedArticle

getMarkovOrder() - Method in class dragon.ml.seqmodel.data.BasicDataset

getMarkovOrder() - Method in interface dragon.ml.seqmodel.data.Dataset

Gets the order of the markov chain

getMarkovOrder() - Method in class dragon.ml.seqmodel.model.AbstractModel

getMarkovOrder() - Method in class dragon.ml.seqmodel.model.CompleteModel

getMarkovOrder() - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the order of the markov chain.

getMasterWord() - Method in class dragon.nlp.tool.lemmatiser.WordMap

getMatchMatrix() - Method in class dragon.ir.clustering.ClusteringEva

getMatrixFilename() - Method in class dragon.matrix.AbstractGiantSparseMatrix

getMatrixFilename() - Method in class dragon.matrix.AbstractSuperSparseMatrix

getMatrixFilename() - Method in class dragon.matrix.SparseMatrixFactory

getMaxDocFrequency() - Method in class dragon.ir.kngbase.CooccurrenceGenerator

getMaxIteration() - Method in class dragon.ir.clustering.BasicKMean

getMaxIteration() - Method in class dragon.ir.clustering.BisectKMean

getMaxIteration() - Method in class dragon.ir.clustering.LinkKMean

getMaxIteration() - Method in class dragon.matrix.vector.PowerMethod

getMaxIteration() - Method in class dragon.ml.seqmodel.crf.AbstractTrainer

getMaxIteration() - Method in interface dragon.ml.seqmodel.crf.Trainer

Gets the number of maximum iterations

getMaxLength() - Method in class dragon.ml.seqmodel.feature.Window

getMaxPathLen(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getMaxSkippedWords() - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getMaxValue() - Method in class dragon.matrix.vector.DoubleVector

getMaxValue() - Method in class dragon.matrix.vector.IntVector

getMemo() - Method in interface dragon.nlp.Concept

getMemo() - Method in class dragon.nlp.Phrase

getMemo() - Method in class dragon.nlp.Term

getMemo() - Method in class dragon.nlp.Token

getMemo() - Method in class dragon.nlp.Triple

getMeshNodeList() - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getMeSHNum() - Method in class dragon.onlinedb.pubmed.PubMedArticle

getMeta() - Method in interface dragon.onlinedb.Article

The meta data of an article refers to topical terms (often manually coded) for the articles

getMeta() - Method in class dragon.onlinedb.BasicArticle

getMeta() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getMetaTag() - Method in class dragon.onlinedb.trec.SgmArticleParser

getMI() - Method in class dragon.ir.clustering.ClusteringEva

getMicroFScore() - Method in class dragon.ir.classification.ClassificationEva

getMicroPrecision() - Method in class dragon.ir.classification.ClassificationEva

getMicroRecall() - Method in class dragon.ir.classification.ClassificationEva

getMiddleMatrix() - Method in interface dragon.matrix.factorize.Factorization

Gets the middle matrix

getMiddleMatrix() - Method in class dragon.matrix.factorize.NMF

getMiddleMatrix() - Method in class dragon.matrix.factorize.SVD

Return the diagonal matrix of singular values

getMinDocFrequency() - Method in class dragon.ir.kngbase.CooccurrenceGenerator

getMinLen(String, String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getMinLen(String, String, String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getMinLength() - Method in class dragon.ml.seqmodel.feature.Window

getMinScore() - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getMinSelectivity() - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getMinSentenceLength() - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

getMinValue() - Method in class dragon.matrix.vector.DoubleVector

getMinValue() - Method in class dragon.matrix.vector.IntVector

getModelGraph() - Method in class dragon.ml.seqmodel.crf.AbstractCRF

getModelGraph() - Method in interface dragon.ml.seqmodel.crf.Labeler

Gets the model graph

getModelGraph() - Method in interface dragon.ml.seqmodel.crf.Trainer

Gets the model graph

getModelParameter() - Method in class dragon.ml.seqmodel.crf.AbstractCRF

getModelParameter() - Method in interface dragon.ml.seqmodel.crf.Labeler

Gets the parameters of the CRF model

getModelParameter() - Method in interface dragon.ml.seqmodel.crf.Trainer

Gets the parameters of the CRF model

getModels() - Method in class dragon.ir.topicmodel.CrossMixtureModel

getMRR() - Method in class dragon.ir.classification.ClassificationEva

getMSSQL2000Con(String, String, String, String) - Static method in class dragon.util.DBUtil

getMSSQL2005Con(String, String, String, String) - Static method in class dragon.util.DBUtil

getMSSQLCon(String, String, String, String) - Static method in class dragon.util.DBUtil

getMultiClassDecoder(int) - Method in class dragon.config.MultiClassDecoderConfig

getMultiClassDecoder(ConfigureNode, int) - Method in class dragon.config.MultiClassDecoderConfig

getMultiplier() - Method in class dragon.ir.search.expand.InformationFlowQE

getMultiplier() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getName() - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

getName(int) - Method in class dragon.ml.seqmodel.feature.FeatureMap

getName() - Method in interface dragon.nlp.Concept

getName() - Method in class dragon.nlp.ontology.mesh.MeshNode

getName() - Method in class dragon.nlp.ontology.umls.UmlsCUI

getName() - Method in class dragon.nlp.Phrase

getName() - Method in class dragon.nlp.Term

getName() - Method in class dragon.nlp.Token

getName() - Method in class dragon.nlp.Word

getNER(int) - Method in class dragon.config.NERConfig

getNER(ConfigureNode, int) - Method in class dragon.config.NERConfig

getNewModelGraph(int, String) - Static method in class dragon.ml.seqmodel.model.AbstractModel

getNewTempFilename(String, String, String) - Static method in class dragon.util.FileUtil

getNewTempFilename(String, String) - Static method in class dragon.util.FileUtil

getNextArticle() - Method in class dragon.onlinedb.AbstractQuery

getNextArticle() - Method in class dragon.onlinedb.ArrayCollectionReader

getNextArticle() - Method in class dragon.onlinedb.BasicCollectionReader

getNextArticle() - Method in interface dragon.onlinedb.CollectionReader

Collection readers only support forward-only read mode.

getNextArticle() - Method in class dragon.onlinedb.SimpleCollectionReader

getNextArticle() - Method in class dragon.onlinedb.trec.AbstractTopicReader

getNextArticle() - Method in class dragon.onlinedb.trec.TrecCollectionReader

getNextArticle() - Method in class dragon.onlinedb.trec.TrecFileReader

getNextSibling() - Method in class dragon.config.BasicConfigureNode

getNextSibling() - Method in interface dragon.config.ConfigureNode

Gets the next object node in parallel to the current onfiguration node

getNextStateWithFeature(int, int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getNextStateWithFeature(int, int) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getNMI() - Method in class dragon.ir.clustering.ClusteringEva

getNodeClass() - Method in class dragon.config.BasicConfigureNode

getNodeClass() - Method in interface dragon.config.ConfigureNode

getNodeID() - Method in class dragon.config.BasicConfigureNode

getNodeID() - Method in interface dragon.config.ConfigureNode

getNodeName() - Method in class dragon.config.BasicConfigureNode

getNodeName() - Method in interface dragon.config.ConfigureNode

getNodeType() - Method in class dragon.config.BasicConfigureNode

getNodeType() - Method in interface dragon.config.ConfigureNode

getNonBoundaryPunctuation() - Method in class dragon.nlp.ontology.AbstractOntology

getNonBoundaryPunctuation() - Method in class dragon.nlp.ontology.AbstractVocabulary

getNonZeroCell(int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getNonZeroCell(int) - Method in class dragon.matrix.DoubleRow

getNonZeroCell(int) - Method in class dragon.matrix.IntRow

getNonZeroCell(int) - Method in interface dragon.matrix.Row

getNonZeroCellInColumn(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroCellInColumn(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the index-th non-zero cell in the given row.

getNonZeroCellInRow(int, int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getNonZeroCellInRow(int, int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

getNonZeroCellInRow(int, int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

getNonZeroCellInRow(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the index-th non-zero cell in the given column.

getNonZeroColumn(int) - Method in class dragon.matrix.DoubleRow

getNonZeroColumn(int) - Method in class dragon.matrix.IntRow

getNonZeroColumn(int) - Method in interface dragon.matrix.Row

getNonZeroColumnInRow(int, int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getNonZeroColumnInRow(int, int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

getNonZeroColumnInRow(int, int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

getNonZeroColumnInRow(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the column index of the index-th non-zero cell in the given row.

getNonZeroColumns() - Method in class dragon.matrix.DoubleRow

getNonZeroColumns() - Method in class dragon.matrix.IntRow

getNonZeroColumns() - Method in interface dragon.matrix.Row

getNonZeroColumnsInRow(int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getNonZeroColumnsInRow(int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

getNonZeroColumnsInRow(int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

getNonZeroColumnsInRow(int) - Method in interface dragon.matrix.SparseMatrix

If the given row has n non-zero cells, this method returns a n-length integer array.

getNonZeroDoubleScore(int) - Method in class dragon.matrix.DoubleRow

getNonZeroDoubleScore(int) - Method in class dragon.matrix.IntRow

getNonZeroDoubleScore(int) - Method in interface dragon.matrix.Row

Return the double score of the index-th non-zero cell

getNonZeroDoubleScoreInColumn(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroDoubleScoreInColumn(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the double score of the index-th non-zero cell in the given column.

getNonZeroDoubleScoreInRow(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroDoubleScoreInRow(int, int) - Method in class dragon.matrix.DoubleGiantSparseMatrix

getNonZeroDoubleScoreInRow(int, int) - Method in class dragon.matrix.DoubleSuperSparseMatrix

getNonZeroDoubleScoreInRow(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the double score of the index-th non-zero cell in the given row.

getNonZeroDoubleScores() - Method in class dragon.matrix.DoubleRow

getNonZeroDoubleScoresInColumn(int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroDoubleScoresInColumn(int) - Method in interface dragon.matrix.SparseMatrix

If the given column has n non-zero cells, this method returns a n-length double array.

getNonZeroDoubleScoresInRow(int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroDoubleScoresInRow(int) - Method in class dragon.matrix.DoubleGiantSparseMatrix

getNonZeroDoubleScoresInRow(int) - Method in class dragon.matrix.DoubleSuperSparseMatrix

getNonZeroDoubleScoresInRow(int) - Method in class dragon.matrix.IntGiantSparseMatrix

getNonZeroDoubleScoresInRow(int) - Method in class dragon.matrix.IntSuperSparseMatrix

getNonZeroDoubleScoresInRow(int) - Method in interface dragon.matrix.SparseMatrix

If the given row has n non-zero cells, this method returns a n-length double array.

getNonZeroIntScore(int) - Method in class dragon.matrix.DoubleRow

getNonZeroIntScore(int) - Method in class dragon.matrix.IntRow

getNonZeroIntScore(int) - Method in interface dragon.matrix.Row

Return the integer score of the index-th non-zero cell

getNonZeroIntScoreInColumn(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroIntScoreInColumn(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the integer score of the index-th non-zero cell in the given column.

getNonZeroIntScoreInRow(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroIntScoreInRow(int, int) - Method in class dragon.matrix.IntGiantSparseMatrix

getNonZeroIntScoreInRow(int, int) - Method in class dragon.matrix.IntSuperSparseMatrix

getNonZeroIntScoreInRow(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the integer score of the index-th non-zero cell in the given row.

getNonZeroIntScores() - Method in class dragon.matrix.IntRow

getNonZeroIntScoresInColumn(int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroIntScoresInColumn(int) - Method in interface dragon.matrix.SparseMatrix

If the given column has n non-zero cells, this method returns a n-length integer array.

getNonZeroIntScoresInRow(int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroIntScoresInRow(int) - Method in class dragon.matrix.IntGiantSparseMatrix

getNonZeroIntScoresInRow(int) - Method in class dragon.matrix.IntSuperSparseMatrix

getNonZeroIntScoresInRow(int) - Method in interface dragon.matrix.SparseMatrix

If the given row has n non-zero cells, this method returns a n-length integer array.

getNonZeroNum() - Method in class dragon.matrix.AbstractFlatSparseMatrix

getNonZeroNum() - Method in class dragon.matrix.AbstractGiantSparseMatrix

getNonZeroNum() - Method in class dragon.matrix.AbstractRow

getNonZeroNum() - Method in class dragon.matrix.AbstractSuperSparseMatrix

getNonZeroNum() - Method in interface dragon.matrix.Row

getNonZeroNum() - Method in interface dragon.matrix.SparseMatrix

getNonZeroNum() - Method in class dragon.matrix.SparseMatrixFactory

getNonZeroNumInColumn(int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroNumInColumn(int) - Method in interface dragon.matrix.SparseMatrix

If the transposed matrix is not set yet, this method will automatically generate the transposed matrix.

getNonZeroNumInRow(int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getNonZeroNumInRow(int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

getNonZeroNumInRow(int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

getNonZeroNumInRow(int) - Method in interface dragon.matrix.SparseMatrix

getNonZeroRowInColumn(int, int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroRowInColumn(int, int) - Method in interface dragon.matrix.SparseMatrix

This method returns the row index of the index-th non-zero cell in the given column.

getNonZeroRowsInColumn(int) - Method in class dragon.matrix.AbstractSparseMatrix

getNonZeroRowsInColumn(int) - Method in interface dragon.matrix.SparseMatrix

If the given column has n non-zero cells, this method returns a n-length integer array.

getNPPOption() - Method in class dragon.nlp.ontology.AbstractOntology

getNPPOption() - Method in class dragon.nlp.ontology.AbstractVocabulary

getNPPOption() - Method in class dragon.nlp.ontology.ChineseVocabulary

getNPPOption() - Method in interface dragon.nlp.ontology.Ontology

Gets the option whether NPP term is allowed.

getNPPOption() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the option whether NPP phrase is allowed.

getNumericFormat(int, int) - Static method in class dragon.util.FormatUtil

getOffset() - Method in class dragon.nlp.Word

getOffset() - Method in class dragon.onlinedb.BasicArticleKey

getOntology(int) - Method in class dragon.config.OntologyConfig

getOntology(ConfigureNode, int) - Method in class dragon.config.OntologyConfig

getOntology() - Method in class dragon.nlp.extract.AbstractTermExtractor

getOntology() - Method in interface dragon.nlp.extract.TermExtractor

Gets the ontology used for the term extractor.

getOntology() - Method in interface dragon.nlp.ontology.SemanticNet

Gets the ontology the current semantic network belongs to

getOntology() - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

getOperator() - Method in class dragon.ir.query.AbstractExpression

getOperator() - Method in class dragon.ir.query.AbstractIRQuery

getOperator() - Method in class dragon.ir.query.AbstractPredicate

getOperator() - Method in class dragon.ir.query.BoolExpression

getOperator() - Method in interface dragon.ir.query.Expression

getOperator() - Method in interface dragon.ir.query.IRQuery

getOperator() - Method in class dragon.ir.query.SimpleExpression

getOriginalDoc(String) - Method in class dragon.ir.index.AbstractIndexReader

getOriginalDoc(int) - Method in class dragon.ir.index.AbstractIndexReader

getOriginalDoc(String) - Method in interface dragon.ir.index.IndexReader

getOriginalDoc(int) - Method in interface dragon.ir.index.IndexReader

getOriginalDoc(String) - Method in class dragon.ir.index.sentence.OnlineSentenceIndexReader

getOriginalDoc(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getOriginalDoc(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getOriginalLabel(int) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

getOriginalLabel(int) - Method in interface dragon.ml.seqmodel.data.DataSequence

Gets the original label of the token in the given position.

getOriginalLabelNum() - Method in class dragon.ml.seqmodel.data.BasicDataset

getOriginalLabelNum() - Method in interface dragon.ml.seqmodel.data.Dataset

Gets the number of original unique labels no matter what order the markov chain is.

getOriginalLabelNum() - Method in class dragon.ml.seqmodel.model.AbstractModel

getOriginalLabelNum() - Method in class dragon.ml.seqmodel.model.CompleteModel

getOriginalLabelNum() - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the number of original unique labels no matter what order the markov chain is.

getOverallPrecision() - Method in class dragon.ir.search.evaluate.TrecEva

getOverallRecall() - Method in class dragon.ir.search.evaluate.TrecEva

getPageNum() - Method in class dragon.onlinedb.AbstractQuery

getPageNum() - Method in interface dragon.onlinedb.ArticleQuery

getPageWidth() - Method in class dragon.onlinedb.AbstractQuery

getPageWidth() - Method in interface dragon.onlinedb.ArticleQuery

getParagraphNum() - Method in class dragon.nlp.Document

getParallelGroup() - Method in class dragon.nlp.Word

getParameterType(String) - Method in class dragon.config.BasicConfigureNode

getParameterType(String) - Method in interface dragon.config.ConfigureNode

If the parameter corresponds to an object, it returns the type (usually the interface) of the object.

getParent() - Method in class dragon.ml.seqmodel.data.BasicDataSequence

getParent() - Method in interface dragon.ml.seqmodel.data.DataSequence

Gets the dataset object which the current data sequence belongs to

getParent(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getParent() - Method in class dragon.nlp.Paragraph

getParent() - Method in class dragon.nlp.Sentence

getParent() - Method in class dragon.nlp.Word

getParentNode() - Method in class dragon.config.BasicConfigureNode

getParentNode() - Method in interface dragon.config.ConfigureNode

Gets the parent node of the current object node

getPath() - Method in class dragon.nlp.ontology.mesh.MeshNode

getPath() - Method in class dragon.onlinedb.searchengine.WebLink

getPhrase(int) - Method in class dragon.nlp.ontology.AbstractVocabulary

getPhrase(int) - Method in class dragon.nlp.ontology.ChineseVocabulary

getPhrase(int) - Method in interface dragon.nlp.ontology.Vocabulary

Gets the index-th phrase in the vocabulary.

getPhraseIndex(long) - Method in class dragon.nlp.ontology.ChineseVocabulary

getPhraseNum() - Method in class dragon.nlp.ontology.AbstractVocabulary

getPhraseNum() - Method in class dragon.nlp.ontology.ChineseVocabulary

getPhraseNum() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the number of phrases in the vocabulary.

getPort() - Method in class dragon.onlinedb.searchengine.WebLink

getPort() - Method in class dragon.util.HttpUtil

getPOSIndex(String, Word) - Method in class dragon.nlp.tool.AbstractTagger

getPOSIndex(String, Word) - Method in class dragon.nlp.tool.BrillTagger

getPOSIndex(String, Word) - Method in class dragon.nlp.tool.HeppleTagger

getPOSIndex() - Method in class dragon.nlp.tool.lemmatiser.ExceptionOperation

getPOSIndex() - Method in class dragon.nlp.tool.lemmatiser.LemmatiserPOS

getPOSIndex() - Method in class dragon.nlp.tool.lemmatiser.SuffixDetachOperation

getPOSIndex() - Method in class dragon.nlp.tool.lemmatiser.SuffixEDetachOperation

getPOSIndex() - Method in class dragon.nlp.Word

getPosInSentence() - Method in class dragon.nlp.Word

getPOSLabel() - Method in class dragon.nlp.Word

getPOSTag() - Method in class dragon.ml.seqmodel.data.POSToken

getPOSTagger() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

getPOSTagger() - Method in class dragon.nlp.extract.AbstractTermExtractor

getPOSTagger() - Method in interface dragon.nlp.extract.PhraseExtractor

Gets the part of speech tagger used for the phrase extractor

getPOSTagger() - Method in interface dragon.nlp.extract.TermExtractor

Gets the part of speech tagger used for the term extractor

getPrecision(int) - Method in class dragon.ir.classification.ClassificationEva

getPrecision() - Method in class dragon.ir.summarize.ROUGE

getPrecisionN(int) - Method in class dragon.ir.classification.ClassificationEva

getPrevLabel() - Method in class dragon.ml.seqmodel.feature.BasicFeature

getPrevLabel() - Method in interface dragon.ml.seqmodel.feature.Feature

can be -1 if the feature is a state rather than an edge feature

getPrintWriter(String) - Static method in class dragon.util.FileUtil

getPrintWriter(String, boolean) - Static method in class dragon.util.FileUtil

getPrintWriter(String, boolean, String) - Static method in class dragon.util.FileUtil

getProb(double) - Method in class dragon.ir.search.smooth.AbstractSmoother

getProbThreshold() - Method in class dragon.ir.kngbase.TopicSignatureModel

getProductList(String, String, String) - Static method in class dragon.onlinedb.amazon.AmazonCatalogQuery

getPunctuation() - Method in class dragon.nlp.Sentence

getPurity() - Method in class dragon.ir.clustering.ClusteringEva

getQuery() - Method in class dragon.ir.query.QueryWriter

getQuery() - Method in class dragon.ir.search.AbstractSearcher

getQuery() - Method in interface dragon.ir.search.Searcher

getQueryExpansion() - Method in class dragon.ir.search.QueryExpansionSearcher

getQueryGenerator(int) - Method in class dragon.config.QueryGeneratorConfig

getQueryGenerator(ConfigureNode, int) - Method in class dragon.config.QueryGeneratorConfig

getQueryKey() - Method in class dragon.ir.query.AbstractIRQuery

getQueryKey() - Method in interface dragon.ir.query.IRQuery

getQueryWeightingOption() - Method in class dragon.ir.search.AbstractSearcher

getQueryWeightingOption() - Method in interface dragon.ir.search.Searcher

getQuick(int, int) - Method in class dragon.matrix.DoubleFlatSparseMatrix

getRandomSeed() - Method in class dragon.ir.clustering.AbstractClustering

getRandomSeed() - Method in interface dragon.ir.clustering.Clustering

getRankedDocumentList() - Method in class dragon.ir.search.AbstractSearcher

getRankedDocumentList() - Method in interface dragon.ir.search.Searcher

getRawSentenceCollectionFilename() - Method in class dragon.ir.index.FileIndex

getRawSentenceIndexFilename() - Method in class dragon.ir.index.FileIndex

getRawText() - Method in class dragon.onlinedb.BasicArticle

getRecall(int) - Method in class dragon.ir.classification.ClassificationEva

getRecall() - Method in class dragon.ir.summarize.ROUGE

getRecordCount(ResultSet) - Static method in class dragon.util.DBUtil

getReferral() - Method in class dragon.nlp.Term

getRelaitonDocMatrix() - Method in class dragon.ir.index.AbstractIndexReader

getRelationCheckOption() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getRelationCheckOption() - Method in interface dragon.nlp.extract.TripleExtractor

Gets the option of checking the existance of the relationship between two semantic types.

getRelationCount() - Method in class dragon.ir.index.IRCollection

getRelationCount() - Method in class dragon.ir.index.IRDoc

getRelationDesc(String) - Method in interface dragon.nlp.ontology.SemanticNet

Gets the description of the given relation

getRelationDesc(String) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

getRelationDocFilename() - Method in class dragon.ir.index.FileIndex

getRelationDocFrequencyList(int) - Method in class dragon.ir.index.AbstractIndexReader

getRelationDocFrequencyList(int) - Method in interface dragon.ir.index.IndexReader

getRelationDocFrequencyList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getRelationDocIndexFilename() - Method in class dragon.ir.index.FileIndex

getRelationDocIndexList(int) - Method in class dragon.ir.index.AbstractIndexReader

getRelationDocIndexList(int) - Method in interface dragon.ir.index.IndexReader

getRelationDocIndexList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getRelationDocList(int) - Method in class dragon.ir.index.AbstractIndexReader

getRelationDocList(int) - Method in interface dragon.ir.index.IndexReader

getRelationDocList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getRelationFrequencyList(int) - Method in class dragon.ir.index.AbstractIndexReader

getRelationFrequencyList(int) - Method in interface dragon.ir.index.IndexReader

To know what relation the frequency corresponds to, call the method getRelationIndexList.

getRelationFrequencyList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getRelationIndexList(int) - Method in class dragon.ir.index.AbstractIndexReader

getRelationIndexList(int) - Method in interface dragon.ir.index.IndexReader

getRelationIndexList() - Method in class dragon.ir.index.OnlineIndexer

getRelationIndexList() - Method in class dragon.ir.index.OnlineIndexWriteController

getRelationIndexList() - Method in class dragon.ir.index.OnlineIndexWriter

getRelationIndexList() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getRelationIndexList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getRelationIndexListFilename() - Method in class dragon.ir.index.FileIndex

getRelationKeyList() - Method in class dragon.ir.index.OnlineIndexer

getRelationKeyList() - Method in class dragon.ir.index.OnlineIndexWriteController

getRelationKeyList() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getRelationKeyListFilename() - Method in class dragon.ir.index.FileIndex

getRelationList(int) - Method in class dragon.ir.index.AbstractIndexReader

getRelationList(int) - Method in interface dragon.ir.index.IndexReader

getRelationList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getRelationNum() - Method in class dragon.ir.index.IRCollection

getRelationNum() - Method in class dragon.ir.index.IRDoc

getRelations(String[], String[]) - Method in interface dragon.nlp.ontology.SemanticNet

Gets all possible relations between two sets of semantic types.

getRelations(String, String) - Method in interface dragon.nlp.ontology.SemanticNet

Gets all possible relations between two semantic types.

getRelations(String[], String[]) - Method in class dragon.nlp.ontology.umls.UmlsRelationNet

getRelations(String, String) - Method in class dragon.nlp.ontology.umls.UmlsRelationNet

getRelations(int, int) - Method in class dragon.nlp.ontology.umls.UmlsRelationNet

getRelations(String[], String[]) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

getRelations(String, String) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

getRelevantDocNum() - Method in class dragon.ir.search.evaluate.TrecEva

getRemainingSections(Article) - Method in class dragon.ir.index.AbstractIndexer

getRemainingSections(Article) - Method in class dragon.ir.index.BasicIndexer

getRemainingSections(Article) - Method in class dragon.ir.index.OnlineIndexer

getRemoveTagOption() - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getResetOption() - Method in class dragon.matrix.AbstractCell

getResetOption() - Method in interface dragon.matrix.Cell

If the reset option is true, the merge method replaces the cell score with the new score, otherwise adds the new score to the existing score.

getResultBuffer() - Method in class dragon.nlp.tool.PorterStemmer

Returns a reference to a character buffer containing the results of the stemming process.

getResultLength() - Method in class dragon.nlp.tool.PorterStemmer

Returns the length of the word resulting from the stemming process.

getResultSet(Connection, String) - Static method in class dragon.util.DBUtil

getRetrievedDocNum() - Method in class dragon.ir.search.AbstractSearcher

getRetrievedDocNum() - Method in class dragon.ir.search.evaluate.TrecEva

getRetrievedDocNum() - Method in interface dragon.ir.search.Searcher

getRightMatrix() - Method in interface dragon.matrix.factorize.Factorization

Gets the right matrix

getRightMatrix() - Method in class dragon.matrix.factorize.NMF

getRightMatrix() - Method in class dragon.matrix.factorize.SVD

Return the right singular vectors

getRoleInClause() - Method in class dragon.nlp.Word

getRoleInDocument() - Method in class dragon.nlp.Paragraph

getRoot(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getRow(int) - Method in class dragon.ir.classification.AbstractClassifier

getRow(int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

getRow(int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

getRow() - Method in interface dragon.matrix.Cell

getRow() - Method in class dragon.matrix.DoubleCell

getRow() - Method in class dragon.matrix.IntCell

getRowEnd(int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getRowIndex() - Method in class dragon.matrix.AbstractRow

getRowIndex() - Method in interface dragon.matrix.Row

getRowKeyList() - Method in class dragon.ir.kngbase.BasicKnowledgeBase

getRowKeyList() - Method in class dragon.ir.kngbase.HALSpace

getRowKeyList() - Method in interface dragon.ir.kngbase.KnowledgeBase

getRowStart(int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

getRowSum(int) - Method in interface dragon.matrix.DoubleDenseMatrix

getRowSum(int) - Method in class dragon.matrix.DoubleFlatDenseMatrix

getRowSum(int) - Method in class dragon.matrix.DoubleFlatSparseMatrix

getRowSum(int) - Method in class dragon.matrix.DoubleGiantSparseMatrix

getRowSum(int) - Method in interface dragon.matrix.DoubleSparseMatrix

getRowSum(int) - Method in class dragon.matrix.DoubleSuperSparseMatrix

getRowSum(int) - Method in interface dragon.matrix.IntDenseMatrix

getRowSum(int) - Method in class dragon.matrix.IntFlatDenseMatrix

getRowSum(int) - Method in class dragon.matrix.IntFlatSparseMatrix

getRowSum(int) - Method in class dragon.matrix.IntGiantSparseMatrix

getRowSum(int) - Method in interface dragon.matrix.IntSparseMatrix

getRowSum(int) - Method in class dragon.matrix.IntSuperSparseMatrix

getScreen() - Static method in class dragon.util.FileUtil

getSearcher(int) - Method in class dragon.config.SearcherConfig

getSearcher(ConfigureNode, int) - Method in class dragon.config.SearcherConfig

getSearcher() - Method in class dragon.ir.search.feedback.AbstractFeedback

getSearcher() - Method in interface dragon.ir.search.feedback.Feedback

getSecondConcept() - Method in class dragon.nlp.Triple

getSecondConceptList() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

getSecondConceptList() - Method in interface dragon.nlp.extract.DualConceptExtractor

Gets the second set of concepts extracted before

getSecondElement() - Method in class dragon.nlp.SimplePair

getSecondTerm() - Method in class dragon.ir.index.IRRelation

getSecondTermPredicate() - Method in class dragon.ir.query.SimpleRelationPredicate

getSecondWord() - Method in class dragon.nlp.tool.xtract.WordPairStat

getSection(Article, int) - Method in class dragon.ir.index.AbstractIndexer

getSection(Article, int) - Method in class dragon.ir.index.BasicIndexer

getSectionID() - Method in class dragon.ir.index.IRSection

getSectionName() - Method in class dragon.ir.index.IRSection

getSegmentEnd(DataSequence, int) - Method in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

getSegmentEnd(DataSequence, int) - Method in class dragon.ml.seqmodel.crf.CollinsSegmentTrainer

getSegmentEnd(int) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

getSegmentEnd(int) - Method in interface dragon.ml.seqmodel.data.DataSequence

Gets the ending position of the segment beginning at the given position

getSelectedFeatureNum() - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getSelectedFeatureNum() - Method in interface dragon.ir.classification.featureselection.FeatureSelector

getSelectedFeatureNum() - Method in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

getSelectedFeatureNum() - Method in interface dragon.ir.clustering.featurefilter.FeatureFilter

getSelectedFeatures(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getSelectedFeatures(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getSelectedFeatures(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.ChiFeatureSelector

getSelectedFeatures(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.ChiFeatureSelector

getSelectedFeatures(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.DocFrequencySelector

getSelectedFeatures(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.DocFrequencySelector

getSelectedFeatures(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.InfoGainFeatureSelector

getSelectedFeatures(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.InfoGainFeatureSelector

getSelectedFeatures(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.MutualInfoFeatureSelector

getSelectedFeatures(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.MutualInfoFeatureSelector

getSelectedFeatures(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.NullFeatureSelector

getSelectedFeatures(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.NullFeatureSelector

getSelectedFeatures(IndexReader, IRDoc[]) - Method in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

getSelectedFeatures(IndexReader, IRDoc[]) - Method in class dragon.ir.clustering.featurefilter.DocFrequencyFilter

getSelectedFeatures(IndexReader, IRDoc[]) - Method in class dragon.ir.clustering.featurefilter.NullFeatureFilter

getSelectivity() - Method in class dragon.ir.query.AbstractIRQuery

getSelectivity() - Method in class dragon.ir.query.AbstractPredicate

getSelectivity() - Method in interface dragon.ir.query.IRQuery

getSelectivity() - Method in interface dragon.ir.query.Predicate

getSemanticCheckOption() - Method in class dragon.nlp.extract.AbstractTermExtractor

getSemanticCheckOption() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getSemanticCheckOption() - Method in interface dragon.nlp.extract.TermExtractor

Gets the option of checking the semantic type of the extracted term

getSemanticCheckOption() - Method in interface dragon.nlp.extract.TripleExtractor

Gets the option of checking the semantic type of the relationship

getSemanticNet() - Method in class dragon.nlp.ontology.AbstractOntology

getSemanticNet() - Method in interface dragon.nlp.ontology.Ontology

Gets the semantic network of the ontology

getSemanticNet() - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getSemanticNet() - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

getSemanticNet() - Method in class dragon.nlp.ontology.umls.UmlsFileBackedOntology

getSemanticType() - Method in interface dragon.nlp.Concept

getSemanticType(String[]) - Method in class dragon.nlp.ontology.BasicOntology

getSemanticType(String) - Method in class dragon.nlp.ontology.BasicOntology

getSemanticType(String[]) - Method in interface dragon.nlp.ontology.Ontology

Gets all possible semantic types of the given concepts

getSemanticType(String) - Method in interface dragon.nlp.ontology.Ontology

Gets all possible semantic types of the given concept

getSemanticType(String[]) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getSemanticType(String) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

getSemanticType(String[]) - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

getSemanticType(String) - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

getSemanticType(String[]) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

getSemanticType(String) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

getSemanticType(String) - Method in class dragon.nlp.ontology.umls.UmlsFileBackedOntology

getSemanticType() - Method in class dragon.nlp.Phrase

getSemanticType() - Method in class dragon.nlp.Term

getSemanticType() - Method in class dragon.nlp.Token

getSemanticType() - Method in class dragon.nlp.Word

getSemanticTypeDesc(String) - Method in interface dragon.nlp.ontology.SemanticNet

Gets the description of the given semantic type

getSemanticTypeDesc(String) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

getSenseDisambiguationOption() - Method in class dragon.nlp.ontology.AbstractOntology

getSenseDisambiguationOption() - Method in interface dragon.nlp.ontology.Ontology

Gets the option disambiguating the sense of extracted terms.

getSenseNum() - Method in class dragon.nlp.Term

getSentenceBase() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getSentenceBase() - Method in class dragon.ir.index.sentence.OnlineSentenceWriteController

getSentenceCollectionName() - Static method in class dragon.ir.index.FileIndex

getSentenceKey(String, int) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

getSentenceList(WordPairStat, int) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

getSentenceNum() - Method in class dragon.nlp.Paragraph

getSentenceSet(IndexReader) - Method in class dragon.ir.summarize.LexRankSummarizer

getSequence(int) - Method in class dragon.ir.index.sequence.OnlineSequenceBase

getSequence(int) - Method in class dragon.ir.index.sequence.SequenceFileReader

getSequence(int) - Method in interface dragon.ir.index.sequence.SequenceReader

For example, a document or a setence could be treated as a seuqnce.

getSequenceLength(int) - Method in class dragon.ir.index.sequence.OnlineSequenceBase

getSequenceLength(int) - Method in class dragon.ir.index.sequence.SequenceFileReader

getSequenceLength(int) - Method in interface dragon.ir.index.sequence.SequenceReader

getSequenceReader() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexer

getSequenceReader() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

getSequenceScore(DataSequence, double[]) - Method in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

getSharedAncestors(String, String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getSimilarity(String, String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getSimilarity(Term, Term) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getSimilarity(Term, Term) - Method in interface dragon.nlp.ontology.SimilarityMetric

Computes the similarity between two onotlogical terms.

getSimilarityMetric() - Method in class dragon.nlp.ontology.AbstractOntology

getSimilarityMetric() - Method in class dragon.nlp.ontology.mesh.BasicMeshOntology

getSimilarityMetric() - Method in interface dragon.nlp.ontology.Ontology

Get the similarity metric of the ontology

getSingleAdjectiveOption() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

getSingleAdjectiveOption() - Method in interface dragon.nlp.extract.PhraseExtractor

Tests if the single-word adjectives will be extracted.

getSingleNounOption() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

getSingleNounOption() - Method in interface dragon.nlp.extract.PhraseExtractor

Tests if the single-word nouns will be extracted.

getSingleVerbOption() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

getSingleVerbOption() - Method in interface dragon.nlp.extract.PhraseExtractor

Tests if the single-word verbs will be extracted.

getSingularValues() - Method in class dragon.matrix.factorize.SVD

Return the one-dimensional array of singular values

getSiteRestriction() - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getSize(String) - Static method in class dragon.util.FileUtil

getSlaveWord() - Method in class dragon.nlp.tool.lemmatiser.WordMap

getSmoothedProb(int) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(IRDoc, int) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(IRDoc) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(SimpleTermPredicate, int) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(IRDoc, SimpleTermPredicate) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(IRDoc, SimpleTermPredicate, int) - Method in class dragon.ir.search.smooth.AbstractSmoother

getSmoothedProb(IRDoc, SimpleTermPredicate, int) - Method in interface dragon.ir.search.smooth.Smoother

getSmoothedProb(IRDoc, SimpleTermPredicate) - Method in interface dragon.ir.search.smooth.Smoother

This method is equal to call getSmoothedProb(doc, queryTerm, 0).

getSmoothedProb(IRDoc, int) - Method in interface dragon.ir.search.smooth.Smoother

Before calling this method, one should call the setQueryTerm method.

getSmoothedProb(SimpleTermPredicate, int) - Method in interface dragon.ir.search.smooth.Smoother

Before calling this method, one should call the setDoc method.

getSmoothedProb(int) - Method in interface dragon.ir.search.smooth.Smoother

Before calling this method, one should call the setQueryTerm method and the setDoc method.

getSmoothedProb(SimpleTermPredicate) - Method in interface dragon.ir.search.smooth.Smoother

It is equal to calling getSmoothedProb(queryTerm, 0);

getSmoothedProb(IRDoc) - Method in interface dragon.ir.search.smooth.Smoother

It is equal to calling getSmoothedProb(doc, 0);

getSmoother(int) - Method in class dragon.config.SmootherConfig

getSmoother(ConfigureNode, int) - Method in class dragon.config.SmootherConfig

getSmoother() - Method in class dragon.ir.search.AbstractSearcher

getSmoother() - Method in interface dragon.ir.search.Searcher

getSocketTimeout() - Method in class dragon.util.HttpUtil

getStart() - Method in class dragon.ml.seqmodel.model.Edge

getStartingWord() - Method in interface dragon.nlp.Concept

Gets the first word of the concept.

getStartingWord() - Method in class dragon.nlp.Phrase

getStartingWord() - Method in class dragon.nlp.Term

getStartingWord() - Method in class dragon.nlp.Token

getStartState(int) - Method in class dragon.ml.seqmodel.model.CompleteModel

getStartState(int) - Method in class dragon.ml.seqmodel.model.GenericModel

getStartState(int) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the index-th starting state.

getStartState(int) - Method in class dragon.ml.seqmodel.model.NestedModel

getStartState(int) - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getStartStateNum() - Method in class dragon.ml.seqmodel.model.CompleteModel

getStartStateNum() - Method in class dragon.ml.seqmodel.model.GenericModel

getStartStateNum() - Method in interface dragon.ml.seqmodel.model.ModelGraph

getStartStateNum() - Method in class dragon.ml.seqmodel.model.NestedModel

getStartStateNum() - Method in class dragon.ml.seqmodel.model.NoEdgeModel

getState() - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

getStateCount(int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getStateCount(int) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getStateNum() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getStateNum() - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getStateNum() - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

getStateNum() - Method in class dragon.ml.seqmodel.model.AbstractModel

getStateNum() - Method in class dragon.ml.seqmodel.model.GenericModel

getStateNum() - Method in interface dragon.ml.seqmodel.model.ModelGraph

Gets the number of states.

getStateNum() - Method in class dragon.ml.seqmodel.model.NestedModel

getStopwordOption() - Method in class dragon.ir.summarize.ROUGE

getString(String) - Method in class dragon.config.BasicConfigureNode

getString(String, String) - Method in class dragon.config.BasicConfigureNode

getString(String) - Method in interface dragon.config.ConfigureNode

getString(String, String) - Method in interface dragon.config.ConfigureNode

If the given parameter exists, return its values, otherwise return the default value.

getSTY(int) - Method in class dragon.nlp.ontology.umls.UmlsCUI

getSTY() - Method in class dragon.nlp.ontology.umls.UmlsSTY

getSTYNum() - Method in class dragon.nlp.ontology.umls.UmlsCUI

getSubConceptOption() - Method in class dragon.nlp.extract.AbstractConceptExtractor

getSubConceptOption() - Method in interface dragon.nlp.extract.ConceptExtractor

getSubordinateVectorThreshold() - Method in class dragon.ir.search.expand.InformationFlowQE

getSubordinateVectorThreshold() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getSubordinateVectorWeight() - Method in class dragon.ir.search.expand.InformationFlowQE

getSubordinateVectorWeight() - Method in class dragon.ir.search.feedback.InformationFlowFeedback

getSubTermOption() - Method in class dragon.nlp.extract.CompoundTermFinder

getSuffix() - Method in class dragon.nlp.tool.lemmatiser.SuffixDetachOperation

getSuffix() - Method in class dragon.nlp.tool.lemmatiser.SuffixEDetachOperation

getSummary() - Method in class dragon.onlinedb.searchengine.WebLink

getSummaryOnlyOption() - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

getSummation() - Method in class dragon.matrix.vector.DoubleVector

getSummation() - Method in class dragon.matrix.vector.IntVector

getTagContent(String, String, int, StringBuffer) - Method in class dragon.onlinedb.trec.SgmArticleParser

getTagContent(String, String, boolean) - Method in class dragon.onlinedb.trec.SgmArticleParser

getTagContent(String, Token, boolean) - Method in class dragon.onlinedb.trec.SgmArticleParser

getTagger(int) - Method in class dragon.config.TaggerConfig

getTagger(ConfigureNode, int) - Method in class dragon.config.TaggerConfig

getTerm() - Method in class dragon.nlp.ontology.BasicTerm

getTermCount() - Method in class dragon.ir.index.IRCollection

getTermCount() - Method in class dragon.ir.index.IRDoc

getTermDistribution(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getTermDistribution(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getTermDocFilename() - Method in class dragon.ir.index.FileIndex

getTermDocFrequency(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

getTermDocFrequencyList(String) - Method in class dragon.config.CooccurrenceAppConfig

getTermDocFrequencyList(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermDocFrequencyList(int) - Method in interface dragon.ir.index.IndexReader

getTermDocFrequencyList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermDocIndexFilename() - Method in class dragon.ir.index.FileIndex

getTermDocIndexList(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermDocIndexList(int) - Method in interface dragon.ir.index.IndexReader

getTermDocIndexList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermDocList(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermDocList(int) - Method in interface dragon.ir.index.IndexReader

getTermDocList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermDocMatrix() - Method in class dragon.ir.index.AbstractIndexReader

getTermFrequencyList(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermFrequencyList(int) - Method in interface dragon.ir.index.IndexReader

To know what term the frequency corresponds to, call the method getTermIndexList.

getTermFrequencyList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermIndexList(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermIndexList(int) - Method in interface dragon.ir.index.IndexReader

getTermIndexList() - Method in class dragon.ir.index.OnlineIndexer

getTermIndexList() - Method in class dragon.ir.index.OnlineIndexWriteController

getTermIndexList() - Method in class dragon.ir.index.OnlineIndexWriter

getTermIndexList() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getTermIndexList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermIndexList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexer

getTermIndexList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

getTermIndexListFilename() - Method in class dragon.ir.index.FileIndex

getTermKey(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermKey(int) - Method in interface dragon.ir.index.IndexReader

getTermKey(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermKeyList() - Method in class dragon.ir.index.OnlineIndexer

getTermKeyList() - Method in class dragon.ir.index.OnlineIndexWriteController

getTermKeyList() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

getTermKeyList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexer

getTermKeyList() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

getTermKeyListFilename() - Method in class dragon.ir.index.FileIndex

getTermList(int) - Method in class dragon.ir.index.AbstractIndexReader

getTermList(int) - Method in interface dragon.ir.index.IndexReader

getTermList(int) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

getTermName(int) - Method in class dragon.ir.topicmodel.AbstractTopicModel

getTermName(int) - Method in interface dragon.ir.topicmodel.TopicModel

getTermNum() - Method in class dragon.ir.index.IRCollection

getTermNum() - Method in class dragon.ir.index.IRDoc

getTermNum() - Method in class dragon.ir.topicmodel.AbstractTopicModel

getTermNum() - Method in interface dragon.ir.topicmodel.TopicModel

getTestValue() - Method in class dragon.ir.query.SimpleExpression

getTestValue() - Method in class dragon.ir.query.SimpleTermPredicate

getText() - Method in class dragon.ir.summarize.TextUnit

getTextGranularity() - Method in class dragon.ir.summarize.TopicSummary

getTextReader(String) - Static method in class dragon.util.FileUtil

getTextReader(File) - Static method in class dragon.util.FileUtil

getTextReader(String, String) - Static method in class dragon.util.FileUtil

getTextReader(File, String) - Static method in class dragon.util.FileUtil

getTextUnit(int) - Method in class dragon.ir.summarize.TopicSummary

getTextWriter(String) - Static method in class dragon.util.FileUtil

getTextWriter(String, String) - Static method in class dragon.util.FileUtil

getTextWriter(String, boolean) - Static method in class dragon.util.FileUtil

getTextWriter(String, boolean, String) - Static method in class dragon.util.FileUtil

getTitle() - Method in interface dragon.onlinedb.Article

getTitle() - Method in class dragon.onlinedb.BasicArticle

getTitle() - Method in class dragon.onlinedb.bibtex.BibTeXArticle

getTitle() - Method in class dragon.onlinedb.searchengine.WebLink

getTitleTag() - Method in class dragon.onlinedb.trec.SgmArticleParser

getToken(int) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

getToken(int) - Method in interface dragon.ml.seqmodel.data.DataSequence

Gets the token in the given position of the sequence

getTokenList(String) - Method in class dragon.ir.query.AbstractIRQuery

getTop100Precision() - Method in class dragon.ir.search.evaluate.TrecEva

getTop100Recall() - Method in class dragon.ir.search.evaluate.TrecEva

getTop10Precision() - Method in class dragon.ir.search.evaluate.TrecEva

getTop10Recall() - Method in class dragon.ir.search.evaluate.TrecEva

getTopic(int) - Method in class dragon.ir.topicmodel.AbstractTopicModel

getTopic(int) - Method in interface dragon.ir.topicmodel.TopicModel

getTopicID() - Method in class dragon.ir.search.evaluate.TrecEva

getTopicModel(int) - Method in class dragon.config.TopicModelConfig

getTopicModel(ConfigureNode, int) - Method in class dragon.config.TopicModelConfig

getTopicNum() - Method in class dragon.ir.topicmodel.AbstractTopicModel

getTopicNum() - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getTopicNum() - Method in interface dragon.ir.topicmodel.TopicModel

getTopicNum() - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getTopicTermName(int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getTopicTermName(int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getTopicTermNum() - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getTopicTermNum() - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getTotalArticleNum() - Method in class dragon.onlinedb.AbstractQuery

getTotalCount() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

getTotalCount() - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

getTotalFrequency() - Method in class dragon.nlp.tool.xtract.WordPairStat

getTranslationCoefficient() - Method in class dragon.ir.classification.SemanticNBClassifier

getTranslationCoefficient() - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

getTranslationCoefficient() - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

getTranslationCoefficient() - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

getTranslationMatrix() - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

getTranslationMatrix() - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

getTranslationProb(int) - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

getTranslationProb(int) - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

getTranspose() - Method in class dragon.matrix.AbstractMatrix

getTranspose() - Method in interface dragon.matrix.Matrix

If one never calls niether the method of setTranspose nor the method of transpose, it returns null.

getTripleExtractor(int) - Method in class dragon.config.TripleExtractorConfig

getTripleExtractor(ConfigureNode, int) - Method in class dragon.config.TripleExtractorConfig

getTripleList() - Method in class dragon.nlp.extract.AbstractTripleExtractor

getTripleList() - Method in interface dragon.nlp.extract.TripleExtractor

Gets triple list

getTUI() - Method in class dragon.nlp.Term

getTUI() - Method in class dragon.nlp.Triple

getType() - Method in class dragon.nlp.Word

getTypeID() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

getTypeID() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

getTypeID() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Gets the unique id of the current feature type.

getUID(String) - Method in class dragon.nlp.ontology.ChineseVocabulary

getUnionAncestors(String, String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

getUseAllObjectForInitialization() - Method in class dragon.ir.clustering.BasicKMean

getUseAllObjectForInitialization() - Method in class dragon.ir.clustering.BisectKMean

getUseDocFrequency() - Method in class dragon.ir.kngbase.TopicSignatureModel

getUseEM() - Method in class dragon.ir.kngbase.TopicSignatureModel

getUseMeanTrim() - Method in class dragon.ir.kngbase.TopicSignatureModel

getUseWeight() - Method in class dragon.ir.clustering.LinkKMean

getValue() - Method in class dragon.ml.seqmodel.feature.BasicFeature

getValue() - Method in interface dragon.ml.seqmodel.feature.Feature

getValue() - Method in class dragon.nlp.Token

getView(int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getView(int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getViewNum() - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getViewNum() - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getViewTermName(int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getViewTermName(int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getViewTermNum() - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getViewTermNum() - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getViewTopic(int, int) - Method in class dragon.ir.topicmodel.AbstractTwoDimensionModel

getViewTopic(int, int) - Method in interface dragon.ir.topicmodel.TwoDimensionModel

getVocabulary(int) - Method in class dragon.config.VocabularyConfig

getVocabulary(ConfigureNode, int) - Method in class dragon.config.VocabularyConfig

getVocabulary() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

getVocabulary() - Method in interface dragon.nlp.extract.PhraseExtractor

Gets the phrase dictionary

getWeight() - Method in class dragon.ir.index.IRDoc

getWeight() - Method in class dragon.ir.index.IRSection

getWeight() - Method in class dragon.ir.query.AbstractPredicate

getWeight() - Method in interface dragon.ir.query.Predicate

getWeight() - Method in class dragon.ir.summarize.TextUnit

getWeight() - Method in interface dragon.nlp.compare.WeightSortable

getWeight() - Method in interface dragon.nlp.Concept

getWeight() - Method in class dragon.nlp.ontology.mesh.MeshNode

getWeight() - Method in class dragon.nlp.Phrase

getWeight() - Method in class dragon.nlp.Term

getWeight() - Method in class dragon.nlp.Token

getWeight() - Method in class dragon.nlp.Triple

getWord(int) - Method in class dragon.nlp.Sentence

getWordContent(int) - Method in class dragon.nlp.tool.xtract.EngWordPairExpand

getWordDictionary() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

getWordNum() - Method in class dragon.nlp.Phrase

getWordNum() - Method in class dragon.nlp.Sentence

getWordNum() - Method in class dragon.nlp.Term

getWordPairs(int) - Method in class dragon.nlp.tool.xtract.EngWordPairGenerator

getWordPairs(int) - Method in interface dragon.nlp.tool.xtract.WordPairGenerator

GibbsLDA - Class in dragon.ir.topicmodel

Latent dirichlet allocation (LDA) with Gibbs sampling

GibbsLDA(SequenceIndexReader, double, double) - Constructor for class dragon.ir.topicmodel.GibbsLDA

GibbsLDA(IndexReader, double, double) - Constructor for class dragon.ir.topicmodel.GibbsLDA

GoogleEngine - Class in dragon.onlinedb.searchengine

Google Search Engine

GoogleEngine() - Constructor for class dragon.onlinedb.searchengine.GoogleEngine

gtol - Static variable in class dragon.ml.seqmodel.crf.LBFGS

Controls the accuracy of the line search mcsrch.

H

HALSpace - Class in dragon.ir.kngbase

Hyper Analogue to Language Space

HALSpace(TokenExtractor, int) - Constructor for class dragon.ir.kngbase.HALSpace

HALSpace(SimpleElementList, TokenExtractor, int) - Constructor for class dragon.ir.kngbase.HALSpace

HALSpace(SimpleElementList, TokenExtractor, int, String, String) - Constructor for class dragon.ir.kngbase.HALSpace

Handler - Class in de.julielab.protocols.classpath

A URLStreamHandler that handles resources on the classpath.

Handler() - Constructor for class de.julielab.protocols.classpath.Handler

Handler(ClassLoader) - Constructor for class de.julielab.protocols.classpath.Handler

hashCode() - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

hashCode() - Method in class dragon.nlp.SimplePair

hashCode() - Method in class dragon.nlp.Term

hashCode() - Method in class dragon.nlp.Token

hashCode() - Method in class dragon.nlp.Word

hasNext() - Method in class dragon.ml.seqmodel.data.BasicDataset

hasNext() - Method in interface dragon.ml.seqmodel.data.Dataset

Tests if the next sequence exists

hasNext() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

hasNext() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

hasNext() - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Tests if next feature exists

hasNext() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Tests if next feature exists

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeEdge

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeEnd

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeKnownWord

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypePosition

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypePOSPattern

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypePrior

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLengthPoly

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeStart

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeStateLoop

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeTokenLoop

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeUnknownWord

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWindow

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

hasNext() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWordScore

hasNext() - Method in interface dragon.ml.seqmodel.model.EdgeIterator

Tests if the next edge exists

HeppleTagger - Class in dragon.nlp.tool

Hepple tagger adopted from hepple.postag

HeppleTagger() - Constructor for class dragon.nlp.tool.HeppleTagger

HeppleTagger(String) - Constructor for class dragon.nlp.tool.HeppleTagger

HierClustering - Class in dragon.ir.clustering

Hierarchical clustering with options of single, complete, and average linkage

HierClustering(IndexReader, DocDistance, int, int) - Constructor for class dragon.ir.clustering.HierClustering

HingeLoss - Class in dragon.ir.classification.multiclass

Hinge Loss Function

HingeLoss() - Constructor for class dragon.ir.classification.multiclass.HingeLoss

hitlist - Variable in class dragon.ir.search.AbstractSearcher

HITS - Class in dragon.matrix.vector

HITS algorithm

HITS(boolean) - Constructor for class dragon.matrix.vector.HITS

HITS(boolean, int) - Constructor for class dragon.matrix.vector.HITS

http - Variable in class dragon.onlinedb.amazon.AmazonCatalogQuery

http - Variable in class dragon.onlinedb.amazon.AmazonReviewQuery

http - Variable in class dragon.onlinedb.citeulike.CiteULikeTagQuery

http - Variable in class dragon.onlinedb.pubmed.PubMedQuery

HttpContent - Class in dragon.util

Extract Text from Web Pages

HttpContent() - Constructor for class dragon.util.HttpContent

HttpUtil - Class in dragon.util

HTTP related utilities

HttpUtil(String) - Constructor for class dragon.util.HttpUtil

HttpUtil(String, String) - Constructor for class dragon.util.HttpUtil

HttpUtil(String, int) - Constructor for class dragon.util.HttpUtil

HttpUtil(String, int, String) - Constructor for class dragon.util.HttpUtil

I

idbase - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

identifyAttributes(ArrayList) - Method in class dragon.nlp.extract.AttributeChecker

identifyParaElements(Sentence) - Method in class dragon.nlp.extract.CoordinatingChecker

idPrefix - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureType

iflag - Variable in exception dragon.ml.seqmodel.crf.LBFGS.ExceptionWithIflag

importDocLinkage(String, String, boolean) - Method in class dragon.ir.index.IndexConverter

importIndex(String, String) - Method in class dragon.ir.index.IndexConverter

index(Article) - Method in class dragon.ir.index.AbstractIndexer

index(Article) - Method in class dragon.ir.index.DualIndexer

index(Article) - Method in interface dragon.ir.index.Indexer

An article has many sections such as title, abstract and body.

index(Indexer, CollectionReader) - Method in class dragon.ir.index.OnlineIndexReader

index(Sentence, String) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

index(Article) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

index(Sentence, String) - Method in class dragon.ir.index.sentence.BasicSentenceIndexer

index(Sentence, String) - Method in class dragon.ir.index.sentence.DualSentenceIndexer

index(Sentence, String) - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

index(Indexer, CollectionReader) - Method in class dragon.ir.index.sentence.OnlineSentenceIndexReader

index(Article) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

index(Indexer, CollectionReader) - Method in class dragon.ir.index.sequence.OnlineSequenceIndexReader

index - Variable in class dragon.ml.seqmodel.data.BasicToken

index - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

index(CollectionReader) - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

index(CollectionReader, Tagger, Lemmatiser) - Method in class dragon.nlp.tool.xtract.SimpleXtract

index(CollectionReader, Tagger, Lemmatiser, String) - Method in class dragon.nlp.tool.xtract.SimpleXtract

index(CollectionReader[], Tagger, Lemmatiser) - Method in class dragon.nlp.tool.xtract.SimpleXtract

index(CollectionReader[], Tagger, Lemmatiser, String) - Method in class dragon.nlp.tool.xtract.SimpleXtract

index(CollectionReader, WordPairIndexer) - Method in class dragon.nlp.tool.xtract.SimpleXtract

index(CollectionReader[], WordPairIndexer) - Method in class dragon.nlp.tool.xtract.SimpleXtract

index(CollectionReader) - Method in interface dragon.nlp.tool.xtract.WordPairIndexer

IndexAppConfig - Class in dragon.config

Index application configuration

IndexAppConfig() - Constructor for class dragon.config.IndexAppConfig

indexArticle(Article) - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

indexArticle(Article) - Method in interface dragon.nlp.tool.xtract.WordPairIndexer

indexCollection(ConfigureNode) - Method in class dragon.config.IndexAppConfig

indexCollection(Indexer, CollectionReader[], boolean) - Method in class dragon.config.IndexAppConfig

IndexComparator - Class in dragon.nlp.compare

Compare index of two objects

IndexComparator() - Constructor for class dragon.nlp.compare.IndexComparator

IndexComparator(boolean) - Constructor for class dragon.nlp.compare.IndexComparator

IndexConvertAppConfig - Class in dragon.config

Index conversion application configuration

IndexConvertAppConfig() - Constructor for class dragon.config.IndexConvertAppConfig

IndexConverter - Class in dragon.ir.index

Import (export) indexing from (to) text format

IndexConverter() - Constructor for class dragon.ir.index.IndexConverter

indexed(String) - Method in class dragon.ir.index.AbstractIndexWriteController

indexed(String) - Method in class dragon.ir.index.BasicIndexer

indexed(String) - Method in class dragon.ir.index.DualIndexer

indexed(String) - Method in interface dragon.ir.index.Indexer

indexed(String) - Method in class dragon.ir.index.OnlineIndexer

indexed(String) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

indexed(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

indexed(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

indexedNum - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

indexedSentence(String) - Method in class dragon.ir.index.sentence.BasicSentenceIndexer

indexedSentence(String) - Method in class dragon.ir.index.sentence.DualSentenceIndexer

indexedSentence(String) - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

Indexer - Interface in dragon.ir.index

Interface of document indexing agent

indexer - Variable in class dragon.ir.index.OnlineIndexReader

indexer - Variable in class dragon.ir.index.sentence.OnlineSentenceIndexReader

indexer - Variable in class dragon.ir.summarize.LexRankSummarizer

IndexerConfig - Class in dragon.config

Indexer configuration

IndexerConfig() - Constructor for class dragon.config.IndexerConfig

IndexerConfig(ConfigureNode) - Constructor for class dragon.config.IndexerConfig

IndexerConfig(String) - Constructor for class dragon.config.IndexerConfig

indexFile - Variable in class dragon.onlinedb.BasicCollectionReader

indexFilename - Variable in class dragon.matrix.AbstractGiantSparseMatrix

indexFilename - Variable in class dragon.matrix.AbstractSuperSparseMatrix

indexFolder - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

indexList - Variable in class dragon.onlinedb.BasicCollectionReader

indexOf(Word) - Method in class dragon.nlp.Sentence

indexOf(Word, int) - Method in class dragon.nlp.Sentence

indexOf(String) - Method in class dragon.nlp.Sentence

indexOf(String, int) - Method in class dragon.nlp.Sentence

indexReader - Variable in class dragon.ir.classification.AbstractClassifier

indexReader - Variable in class dragon.ir.clustering.AbstractClustering

IndexReader - Interface in dragon.ir.index

Interface of index reader

indexReader - Variable in class dragon.ir.search.AbstractSearcher

indexReader - Variable in class dragon.ir.search.smooth.AbstractMixtureWeightEM

indexReader - Variable in class dragon.ir.summarize.AbstractStructureSum

indexReader - Variable in class dragon.ir.summarize.LexRankSummarizer

indexReader - Variable in class dragon.ir.topicmodel.AbstractTopicModel

IndexReaderConfig - Class in dragon.config

Index reader configuration

IndexReaderConfig() - Constructor for class dragon.config.IndexReaderConfig

IndexReaderConfig(ConfigureNode) - Constructor for class dragon.config.IndexReaderConfig

IndexReaderConfig(String) - Constructor for class dragon.config.IndexReaderConfig

IndexSortable - Interface in dragon.nlp.compare

Interface for index-sortable objects

IndexWriter - Interface in dragon.ir.index

Interface of index writer

InfoGainFeatureSelector - Class in dragon.ir.classification.featureselection

A Feature Selector which uses information gain to select top features

InfoGainFeatureSelector(double) - Constructor for class dragon.ir.classification.featureselection.InfoGainFeatureSelector

InformationFlowFeedback - Class in dragon.ir.search.feedback

Feedback based on information flow

InformationFlowFeedback(TokenExtractor, Searcher, int, int, double) - Constructor for class dragon.ir.search.feedback.InformationFlowFeedback

InformationFlowQE - Class in dragon.ir.search.expand

Query Expansion based on Information Flow

InformationFlowQE(IndexReader, int, double) - Constructor for class dragon.ir.search.expand.InformationFlowQE

InformationFlowQE(HALSpace, IndexReader, int, double) - Constructor for class dragon.ir.search.expand.InformationFlowQE

init(RelSimpleQuery) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

init(RelSimpleQuery) - Method in class dragon.ir.search.smooth.DocTransMixtureWeightEM

initAnnie(String) - Method in class dragon.nlp.tool.Annie

initArray(double[], double) - Static method in class dragon.util.MathUtil

initArray(int[], int) - Static method in class dragon.util.MathUtil

initDocExtraction() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

initDocExtraction() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

initDocExtraction() - Method in class dragon.nlp.extract.AbstractTermExtractor

initDocExtraction() - Method in class dragon.nlp.extract.AbstractTokenExtractor

initDocExtraction() - Method in class dragon.nlp.extract.AbstractTripleExtractor

initDocExtraction() - Method in interface dragon.nlp.extract.ConceptExtractor

It is required to call this method before one calls extractFromDoc method.

initDocExtraction() - Method in interface dragon.nlp.extract.DualConceptExtractor

It is required to call this method before one calls extractFromDoc method.

initDocExtraction() - Method in interface dragon.nlp.extract.TripleExtractor

It is required to call this method before calling the extractFromDoc method.

initDocIndexing() - Method in class dragon.ir.index.AbstractIndexer

initDocIndexing() - Method in class dragon.ir.index.BasicIndexer

initDocIndexing() - Method in class dragon.ir.index.OnlineIndexer

initialize(IRDoc[]) - Method in class dragon.ir.clustering.BasicKMean

initialize(IndexReader, IRDoc[]) - Method in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

initialize(IndexReader, IRDoc[]) - Method in interface dragon.ir.clustering.featurefilter.FeatureFilter

This method chooses a subset of features for text clustering

initialize(IRDoc[]) - Method in class dragon.ir.clustering.LinkKMean

initialize() - Method in class dragon.ir.index.AbstractIndexer

initialize() - Method in class dragon.ir.index.AbstractIndexWriteController

initialize() - Method in class dragon.ir.index.BasicIndexReader

initialize() - Method in class dragon.ir.index.BasicIndexWriteController

initialize() - Method in class dragon.ir.index.BasicIndexWriter

initialize() - Method in class dragon.ir.index.DualIndexer

initialize() - Method in interface dragon.ir.index.Indexer

It is required to call this method before calling index method to index articles.

initialize() - Method in interface dragon.ir.index.IndexReader

It is required to call this method before reading out any indexing information.

initialize() - Method in interface dragon.ir.index.IndexWriter

It is required to call this method before calling the write method

initialize() - Method in class dragon.ir.index.OnlineIndexReader

initialize() - Method in class dragon.ir.index.OnlineIndexWriteController

initialize() - Method in class dragon.ir.index.OnlineIndexWriter

initialize() - Method in class dragon.ir.index.sentence.BasicSentenceIndexer

initialize() - Method in class dragon.ir.index.sentence.BasicSentenceIndexReader

initialize() - Method in class dragon.ir.index.sentence.BasicSentenceWriteController

initialize() - Method in class dragon.ir.index.sentence.DualSentenceIndexer

initialize() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

initialize() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexReader

initialize() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

initialize() - Method in class dragon.ir.index.sequence.BasicSequenceIndexReader

initialize() - Method in class dragon.ir.index.sequence.BasicSequenceIndexWriter

initialize() - Method in class dragon.ir.index.sequence.OnlineSequenceBase

initialize() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexReader

initialize() - Method in class dragon.ir.index.sequence.OnlineSequenceIndexWriter

initialize() - Method in class dragon.ir.index.sequence.SequenceFileReader

initialize() - Method in class dragon.ir.index.sequence.SequenceFileWriter

initialize() - Method in interface dragon.ir.index.sequence.SequenceReader

It is required to call this method before reading out sequence information from indexing files.

initialize() - Method in interface dragon.ir.index.sequence.SequenceWriter

It is required to call this method before calling the addSequence method.

initialize(double, double, double, double, double) - Method in class dragon.ir.query.BasicQueryGenerator

initialize(boolean, boolean, boolean, boolean) - Method in class dragon.ir.query.PhraseQEGenerator

initialize(int, int, int, double[][], double[][]) - Method in class dragon.ir.topicmodel.AspectModel

initialize(int, int, int, int, double[][], double[][][], double[][][]) - Method in class dragon.ir.topicmodel.CrossMixtureModel

initialize(int, int, int, double[][], double[][]) - Method in class dragon.ir.topicmodel.SimpleMixtureModel

initialize(int, int, int, double[][], double[][], int, int, double[][], double[][][], double[][][]) - Method in class dragon.ir.topicmodel.TwoDimensionEM

initialize(String, String, String, String) - Method in class dragon.nlp.tool.BrillTagger

Initialize the tagger

initialized - Variable in class dragon.ir.clustering.BasicKMean

initialized - Variable in class dragon.ir.index.AbstractIndexer

initialized - Variable in class dragon.ir.index.AbstractIndexReader

initialized - Variable in class dragon.ir.index.AbstractIndexWriteController

initialized - Variable in class dragon.ir.index.AbstractIndexWriter

initialized - Variable in class dragon.ir.index.DualIndexer

initialized - Variable in class dragon.ir.index.sentence.AbstractSentenceIndexer

initialized - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexer

initialized - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

initialized - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

initialized - Variable in class dragon.ir.query.BasicQueryGenerator

initIndex() - Method in class dragon.ir.index.AbstractIndexer

initIndex() - Method in class dragon.ir.index.BasicIndexer

initIndex() - Method in class dragon.ir.index.OnlineIndexer

initNewQuery() - Method in class dragon.ir.query.QueryWriter

initQuery() - Method in class dragon.onlinedb.amazon.AmazonCatalogQuery

initQuery() - Method in class dragon.onlinedb.amazon.AmazonReviewQuery

initQuery() - Method in interface dragon.onlinedb.ArticleQuery

One should call this method before retrieval articles.

initQuery() - Method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

initQuery() - Method in class dragon.onlinedb.pubmed.PubMedQuery

initQuery() - Method in class dragon.onlinedb.searchengine.GoogleEngine

initScanFeaturesAt(DataSequence) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

initSectionWrite(IRSection) - Method in class dragon.ir.index.AbstractIndexer

initSectionWrite(IRSection) - Method in class dragon.ir.index.BasicIndexer

initSectionWrite(IRSection) - Method in class dragon.ir.index.OnlineIndexer

innerEdgeIterator() - Method in class dragon.ml.seqmodel.model.NestedModel

insertedPos() - Method in class dragon.util.SortedArray

IntCell - Class in dragon.matrix

Cell for integer data

IntCell(int, int, int) - Constructor for class dragon.matrix.IntCell

IntCell(int, int) - Constructor for class dragon.matrix.IntCell

IntDenseMatrix - Interface in dragon.matrix

Interface of Integer-typed Dense Matrix

IntFlatDenseMatrix - Class in dragon.matrix

Flat dense matrix for integer data

IntFlatDenseMatrix(int[][]) - Constructor for class dragon.matrix.IntFlatDenseMatrix

IntFlatDenseMatrix(int, int) - Constructor for class dragon.matrix.IntFlatDenseMatrix

IntFlatDenseMatrix(String) - Constructor for class dragon.matrix.IntFlatDenseMatrix

IntFlatDenseMatrix(String, boolean) - Constructor for class dragon.matrix.IntFlatDenseMatrix

IntFlatSparseMatrix - Class in dragon.matrix

Flat sparse matrix for integer data

IntFlatSparseMatrix() - Constructor for class dragon.matrix.IntFlatSparseMatrix

IntFlatSparseMatrix(boolean, boolean) - Constructor for class dragon.matrix.IntFlatSparseMatrix

IntFlatSparseMatrix(String) - Constructor for class dragon.matrix.IntFlatSparseMatrix

IntFlatSparseMatrix(String, boolean) - Constructor for class dragon.matrix.IntFlatSparseMatrix

IntGiantSparseMatrix - Class in dragon.matrix

Giant sparse matrix for extreme large integer matrix

IntGiantSparseMatrix(String, String) - Constructor for class dragon.matrix.IntGiantSparseMatrix

IntGiantSparseMatrix(String, String, boolean, boolean) - Constructor for class dragon.matrix.IntGiantSparseMatrix

INTRODUCTION - Static variable in class dragon.nlp.Document

IntRow - Class in dragon.matrix

Row of matrix for integer data

IntRow() - Constructor for class dragon.matrix.IntRow

IntRow(int, int, int[], int[]) - Constructor for class dragon.matrix.IntRow

IntSparseMatrix - Interface in dragon.matrix

Interface of Integer-typed Sparse Matrix

IntSuperSparseMatrix - Class in dragon.matrix

Super sparse matrix for integer data

IntSuperSparseMatrix(String) - Constructor for class dragon.matrix.IntSuperSparseMatrix

IntSuperSparseMatrix(String, String) - Constructor for class dragon.matrix.IntSuperSparseMatrix

IntSuperSparseMatrix(String, boolean, boolean) - Constructor for class dragon.matrix.IntSuperSparseMatrix

IntSuperSparseMatrix(String, String, boolean, boolean) - Constructor for class dragon.matrix.IntSuperSparseMatrix

IntVector - Class in dragon.matrix.vector

Data structure for vector of integer type

IntVector(int) - Constructor for class dragon.matrix.vector.IntVector

IntVector(int[]) - Constructor for class dragon.matrix.vector.IntVector

invSigmaSquare - Variable in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

IRCollection - Class in dragon.ir.index

IRCollection is the data structure for a document collection

IRCollection() - Constructor for class dragon.ir.index.IRCollection

IRDoc - Class in dragon.ir.index

IRDoc is data structure for IR document indexing which can be sorted and thus compared by weight and index

IRDoc(String) - Constructor for class dragon.ir.index.IRDoc

IRDoc(int) - Constructor for class dragon.ir.index.IRDoc

IRDocIndexList - Interface in dragon.ir.index

Interface of IRDoc Index List

IRQuery - Interface in dragon.ir.query

Interface of IR Query

IRRelation - Class in dragon.ir.index

IRRelation is the basic data structure for binary relation extracted from document which can be sorted and compared by index and frequency.

IRRelation(int, int, int) - Constructor for class dragon.ir.index.IRRelation

IRRelation(int, int, int, int, int) - Constructor for class dragon.ir.index.IRRelation

IRRelationIndexList - Interface in dragon.ir.index

Interface of IRRelation Index List

IRSection - Class in dragon.ir.index

IRCollection is the data structure for document section indexing

IRSection(int) - Constructor for class dragon.ir.index.IRSection

IRSection(int, String) - Constructor for class dragon.ir.index.IRSection

IRSignature - Interface in dragon.ir.index

Interface of IRSignature

IRSignatureIndexList - Interface in dragon.ir.index

Interface of IRSignature Index List

IRTerm - Class in dragon.ir.index

This is basic indexing unit which can be sorted and compared by index and frequency

IRTerm(String) - Constructor for class dragon.ir.index.IRTerm

IRTerm(int, int) - Constructor for class dragon.ir.index.IRTerm

IRTerm(String, int, int) - Constructor for class dragon.ir.index.IRTerm

IRTerm(int, int, int) - Constructor for class dragon.ir.index.IRTerm

IRTermIndexList - Interface in dragon.ir.index

Interface of IRTerm Index List

isAbbrOfLastTerm(Word, Term) - Method in class dragon.nlp.extract.Abbreviation

isAllCapital() - Method in class dragon.nlp.Word

isApostrophesAsWord(int, int, String) - Method in class dragon.nlp.extract.EngDocumentParser

isAttribute(Term) - Method in class dragon.nlp.extract.AttributeChecker

isAttribute(String) - Method in class dragon.nlp.extract.AttributeChecker

isBoolExpression() - Method in class dragon.ir.query.AbstractExpression

isBoolExpression() - Method in interface dragon.ir.query.Expression

isBoolPredicate() - Method in class dragon.ir.query.AbstractPredicate

isBoolPredicate() - Method in interface dragon.ir.query.Predicate

isBoundaryWord(Word) - Method in class dragon.nlp.ontology.AbstractOntology

isBoundaryWord(Word) - Method in class dragon.nlp.ontology.AbstractVocabulary

isCompoundQuery() - Method in class dragon.ir.query.AbstractIRQuery

isCompoundQuery() - Method in class dragon.ir.query.AbstractPredicate

isCompoundQuery() - Method in interface dragon.ir.query.IRQuery

If the current query denotes a simple predicate, this method returns false, otherwise true.

isConjunction(String) - Method in class dragon.nlp.tool.AbstractTagger

isCorrect(DataSequence, DataSequence) - Method in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

isDocFirstOptimal() - Method in class dragon.ir.search.smooth.AbstractSmoother

isDocFirstOptimal() - Method in interface dragon.ir.search.smooth.Smoother

If this method returns true, the fullrank searcher will do breadth-frist search, i.e.

isEndState(int) - Method in class dragon.ml.seqmodel.model.CompleteModel

isEndState(int) - Method in class dragon.ml.seqmodel.model.GenericModel

isEndState(int) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Tests if the i-th state is an ending state

isEndState(int) - Method in class dragon.ml.seqmodel.model.NestedModel

isEndState(int) - Method in class dragon.ml.seqmodel.model.NoEdgeModel

isExpired() - Method in class dragon.nlp.Term

isExtractionMerged() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

isExtractionMerged() - Method in class dragon.nlp.extract.AbstractTermExtractor

isFinalized - Variable in class dragon.matrix.AbstractSparseMatrix

isFinalized() - Method in class dragon.matrix.AbstractSparseMatrix

isFinalized() - Method in interface dragon.matrix.SparseMatrix

If this method returns true, one can not add data to the sparse matrix any more.

isFrozen() - Method in class dragon.ml.seqmodel.feature.FeatureMap

ISIArticleParser - Class in dragon.onlinedb.isi

Journal of ISI article parser

ISIArticleParser() - Constructor for class dragon.onlinedb.isi.ISIArticleParser

isInitialCapital() - Method in class dragon.nlp.Word

isNumber(String) - Method in class dragon.nlp.extract.EngDocumentParser

isNumber() - Method in class dragon.nlp.Word

isOperator(String) - Method in class dragon.ir.query.Operator

isPeriodAsToken(int, int, String) - Method in class dragon.nlp.extract.EngDocumentParser

isPeriodAsWord(int, int, String) - Method in class dragon.nlp.extract.EngDocumentParser

isPhrase(String) - Method in class dragon.nlp.ontology.BasicVocabulary

isPhrase(Word, Word) - Method in class dragon.nlp.ontology.BasicVocabulary

isPhrase(String) - Method in class dragon.nlp.ontology.ChineseVocabulary

isPhrase(Word, Word) - Method in class dragon.nlp.ontology.ChineseVocabulary

isPhrase(String) - Method in interface dragon.nlp.ontology.Vocabulary

Tests if the term is a phrase

isPhrase(Word, Word) - Method in interface dragon.nlp.ontology.Vocabulary

Tests if the term specified by the starting word and the ending word is a prhase.

isPredicate() - Method in class dragon.ir.query.AbstractIRQuery

isPredicate() - Method in class dragon.ir.query.AbstractPredicate

isPredicate() - Method in interface dragon.ir.query.IRQuery

A predicate always begins with a ltter T (term predicate), R(relation predicate), or M(modifier predicate)

isPredicted() - Method in class dragon.nlp.Term

isPunctuation() - Method in class dragon.nlp.Word

isQualifierPredicate() - Method in class dragon.ir.query.AbstractPredicate

isQualifierPredicate() - Method in interface dragon.ir.query.Predicate

isQueryTermFirstOptimal() - Method in class dragon.ir.search.smooth.AbstractSmoother

isQueryTermFirstOptimal() - Method in interface dragon.ir.search.smooth.Smoother

If this method returns true, the fullrank searcher will do depth-frist search, i.e.

isRelation() - Method in class dragon.nlp.ontology.umls.UmlsSTY

isRelationPredicate() - Method in class dragon.ir.query.AbstractPredicate

isRelationPredicate() - Method in interface dragon.ir.query.Predicate

isRelationSupported() - Method in class dragon.ir.index.AbstractIndexReader

isRelationSupported() - Method in class dragon.ir.index.AbstractIndexWriteController

isRelationSupported() - Method in class dragon.ir.index.FileIndex

isRelationSupported() - Method in interface dragon.ir.index.IndexReader

isRelationSupported() - Method in class dragon.ir.index.OnlineIndexer

isRelationSupported() - Method in class dragon.ir.index.sentence.OnlineSentenceIndexer

isRelationSupported() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexReader

isRelBoolQuery() - Method in class dragon.ir.query.AbstractIRQuery

isRelBoolQuery() - Method in interface dragon.ir.query.IRQuery

isRelBoolQuery() - Method in class dragon.ir.query.RelBoolQuery

isRelSimpleQuery() - Method in class dragon.ir.query.AbstractIRQuery

isRelSimpleQuery() - Method in interface dragon.ir.query.IRQuery

isRelSimpleQuery() - Method in class dragon.ir.query.RelSimpleQuery

isRoot(String) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

isSegmentStart - Variable in class dragon.ml.seqmodel.data.BasicToken

isSegmentStart() - Method in class dragon.ml.seqmodel.data.BasicToken

isSelected(int) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

isSelected(int) - Method in interface dragon.ir.classification.featureselection.FeatureSelector

isSelected(int) - Method in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

isSelected(int) - Method in interface dragon.ir.clustering.featurefilter.FeatureFilter

isSemanticRelated(String[], String[]) - Method in interface dragon.nlp.ontology.SemanticNet

Tests if any one semantic type in the first set is related to any one semantic type in the second set.

isSemanticRelated(String, String) - Method in interface dragon.nlp.ontology.SemanticNet

Tests if there exists a relationship between the two given semantic types

isSemanticRelated(String[], String[]) - Method in class dragon.nlp.ontology.umls.UmlsRelationNet

isSemanticRelated(String, String) - Method in class dragon.nlp.ontology.umls.UmlsRelationNet

isSemanticRelated(int, int) - Method in class dragon.nlp.ontology.umls.UmlsRelationNet

isSemanticRelated(String[], String[]) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

isSemanticRelated(String, String) - Method in class dragon.nlp.ontology.umls.UmlsSemanticNet

isSemanticType() - Method in class dragon.nlp.ontology.umls.UmlsSTY

isSentencePeriod(int, String) - Method in class dragon.nlp.extract.EngDocumentParser

isSimpleExpression() - Method in class dragon.ir.query.AbstractExpression

isSimpleExpression() - Method in interface dragon.ir.query.Expression

isSimplePredicate() - Method in class dragon.ir.query.AbstractPredicate

isSimplePredicate() - Method in interface dragon.ir.query.Predicate

isStartingWord(Word) - Method in class dragon.nlp.ontology.AbstractOntology

isStartingWord(Word) - Method in class dragon.nlp.ontology.AbstractVocabulary

isStartingWord(Word) - Method in class dragon.nlp.ontology.ChineseVocabulary

isStartingWord(Word) - Method in interface dragon.nlp.ontology.Ontology

Tests if the current word could be a starting word of a term.

isStartingWord(Word) - Method in interface dragon.nlp.ontology.Vocabulary

Tests if the specified word could be the starting a word of a phrase.

isStartState(int) - Method in class dragon.ml.seqmodel.model.CompleteModel

isStartState(int) - Method in class dragon.ml.seqmodel.model.GenericModel

isStartState(int) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Tests if the i-th state is a starting state

isStartState(int) - Method in class dragon.ml.seqmodel.model.NestedModel

isStartState(int) - Method in class dragon.ml.seqmodel.model.NoEdgeModel

isSubConcept() - Method in interface dragon.nlp.Concept

isSubConcept() - Method in class dragon.nlp.Phrase

isSubConcept() - Method in class dragon.nlp.Term

isSubConcept() - Method in class dragon.nlp.Token

isTerm(String) - Method in class dragon.nlp.ontology.BasicOntology

isTerm(Word, Word) - Method in class dragon.nlp.ontology.BasicOntology

isTerm(String) - Method in interface dragon.nlp.ontology.Ontology

Tests if the given term is defined in the ontology.

isTerm(Word, Word) - Method in interface dragon.nlp.ontology.Ontology

Tests if the term specified by the starting word and the ending word is a term in the ontology.

isTerm(String) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

isTerm(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

isTerm(String) - Method in class dragon.nlp.ontology.umls.UmlsDBOntology

isTerm(String) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

isTerm(Word, Word) - Method in class dragon.nlp.ontology.umls.UmlsExactOntology

isTerm(String) - Method in class dragon.nlp.ontology.umls.UmlsFileBackedOntology

isTermPredicate() - Method in class dragon.ir.query.AbstractPredicate

isTermPredicate() - Method in interface dragon.ir.query.Predicate

isUsefulForPhrase(Word) - Method in class dragon.nlp.ontology.AbstractVocabulary

isUsefulForTerm(Word) - Method in class dragon.nlp.ontology.AbstractOntology

isValidFeature(DataSequence, int, int, Feature) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

isWord() - Method in class dragon.nlp.Word

isWritingMode() - Method in class dragon.nlp.SimpleElementList

isWritingMode() - Method in class dragon.onlinedb.BasicArticleIndex

iterationNum - Variable in class dragon.ir.search.smooth.AbstractMixtureWeightEM

iterations - Variable in class dragon.ir.topicmodel.AbstractModel

J

JIANG - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

JING - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

JMSmoother - Class in dragon.ir.search.smooth

Linear interpolation smoother

JMSmoother(IRCollection, double) - Constructor for class dragon.ir.search.smooth.JMSmoother

K

keep(Concept) - Method in class dragon.nlp.extract.BasicConceptFilter

keep(String) - Method in class dragon.nlp.extract.BasicConceptFilter

keep(Concept) - Method in interface dragon.nlp.extract.ConceptFilter

Tests if the specified concept object should be kept

keep(String) - Method in interface dragon.nlp.extract.ConceptFilter

Tests if the specified concept should be kept

key - Variable in class dragon.onlinedb.BasicArticle

KLDivDocDistance - Class in dragon.ir.clustering.docdistance

Document distance measure of using KL divergence

KLDivDocDistance(DoubleSparseMatrix) - Constructor for class dragon.ir.clustering.docdistance.KLDivDocDistance

KLDivDocDistance(DoubleSparseMatrix, double) - Constructor for class dragon.ir.clustering.docdistance.KLDivDocDistance

KLDivDocDistance(IndexReader, DoubleSparseMatrix) - Constructor for class dragon.ir.clustering.docdistance.KLDivDocDistance

KLDivDocDistance(IndexReader, DoubleSparseMatrix, double) - Constructor for class dragon.ir.clustering.docdistance.KLDivDocDistance

KNAPPE - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

KnowledgeBase - Interface in dragon.ir.kngbase

Interface of knowledge base

KnowledgeBaseConfig - Class in dragon.config

Knowledge base configuration

KnowledgeBaseConfig() - Constructor for class dragon.config.KnowledgeBaseConfig

KnowledgeBaseConfig(ConfigureNode) - Constructor for class dragon.config.KnowledgeBaseConfig

KnowledgeBaseConfig(String) - Constructor for class dragon.config.KnowledgeBaseConfig

L

label(DataSequence) - Method in interface dragon.ml.seqmodel.crf.Labeler

Labels the given sequence

label(DataSequence, double[]) - Method in interface dragon.ml.seqmodel.crf.Labeler

Labels the sequence using the given model

label(DataSequence) - Method in class dragon.ml.seqmodel.crf.ViterbiBasicLabeler

label(DataSequence, double[]) - Method in class dragon.ml.seqmodel.crf.ViterbiBasicLabeler

label(DataSequence) - Method in class dragon.ml.seqmodel.crf.ViterbiSegmentLabeler

label(DataSequence, double[]) - Method in class dragon.ml.seqmodel.crf.ViterbiSegmentLabeler

label - Variable in class dragon.ml.seqmodel.data.BasicToken

LabelConverter - Interface in dragon.ml.seqmodel.data

Interface of Label Converter

Labeler - Interface in dragon.ml.seqmodel.crf

Interface of CRF Labeler

lambda - Variable in class dragon.ml.seqmodel.crf.AbstractCRF

lastClassProb - Variable in class dragon.ir.classification.NBClassifier

LASTPOS - Static variable in interface dragon.nlp.tool.Lemmatiser

LASTPOS - Static variable in interface dragon.nlp.tool.WordNetUtil

LATimesArticleParser - Class in dragon.onlinedb.trec

LA Times article parser

LATimesArticleParser() - Constructor for class dragon.onlinedb.trec.LATimesArticleParser

lb1(int[], int, int, double, int, int, double[], double, double[], double[], boolean) - Static method in class dragon.ml.seqmodel.crf.LBFGS

Print debugging and status messages for lbfgs.

LBFGS - Class in dragon.ml.seqmodel.crf

This class contains code for the limited-memory Broyden-Fletcher-Goldfarb-Shanno (LBFGS) algorithm for large-scale multidimensional unconstrained minimization problems.

LBFGS() - Constructor for class dragon.ml.seqmodel.crf.LBFGS

lbfgs(int, int, double[], double, double[], boolean, double[], int[], double, double, int[]) - Static method in class dragon.ml.seqmodel.crf.LBFGS

This subroutine solves the unconstrained minimization problem

LBFGS.ExceptionWithIflag - Exception in dragon.ml.seqmodel.crf

Specialized exception class for LBFGS; contains the iflag value returned by lbfgs.

LBFGSBasicTrainer - Class in dragon.ml.seqmodel.crf

LBFGS basic trainer

LBFGSBasicTrainer(ModelGraph, FeatureGenerator) - Constructor for class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

LBFGSSegmentTrainer - Class in dragon.ml.seqmodel.crf

LBFGS segment trainer

LBFGSSegmentTrainer(ModelGraph, FeatureGenerator, int) - Constructor for class dragon.ml.seqmodel.crf.LBFGSSegmentTrainer

LEACOCK - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

left - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

leftBoundary(int, int) - Method in class dragon.ml.seqmodel.feature.Window

lemmatise(String) - Method in class dragon.nlp.tool.lemmatiser.LemmatiserPOS

lemmatiser - Variable in class dragon.nlp.extract.AbstractPhraseExtractor

lemmatiser - Variable in class dragon.nlp.extract.AbstractTermExtractor

lemmatiser - Variable in class dragon.nlp.extract.AbstractTokenExtractor

lemmatiser - Variable in class dragon.nlp.ontology.AbstractVocabulary

Lemmatiser - Interface in dragon.nlp.tool

Interface of lemmtaiser which gets the base form of a word

lemmatiser - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

LemmatiserConfig - Class in dragon.config

Lemmatiser configuration

LemmatiserConfig() - Constructor for class dragon.config.LemmatiserConfig

LemmatiserConfig(ConfigureNode) - Constructor for class dragon.config.LemmatiserConfig

LemmatiserConfig(String) - Constructor for class dragon.config.LemmatiserConfig

LemmatiserPOS - Class in dragon.nlp.tool.lemmatiser

Part of speech lemmtiser

LemmatiserPOS(int, Operation[]) - Constructor for class dragon.nlp.tool.lemmatiser.LemmatiserPOS

LemmatiserPOS(int, Operation[], SortedArray) - Constructor for class dragon.nlp.tool.lemmatiser.LemmatiserPOS

lemmatize(String, int) - Method in class dragon.nlp.tool.lemmatiser.EngLemmatiser

lemmatize(String) - Method in class dragon.nlp.tool.lemmatiser.EngLemmatiser

lemmatize(String) - Method in interface dragon.nlp.tool.Lemmatiser

Gets the base form of the word.

lemmatize(String, int) - Method in interface dragon.nlp.tool.Lemmatiser

Gets the base form of the word

lemmatize(String) - Method in class dragon.nlp.tool.PorterStemmer

lemmatize(String, int) - Method in class dragon.nlp.tool.PorterStemmer

lemmatize(String) - Method in class dragon.nlp.tool.WordNetDidion

lemmatize(String, int) - Method in class dragon.nlp.tool.WordNetDidion

lemmatize(String) - Method in interface dragon.nlp.tool.WordNetUtil

lemmatize(String, int) - Method in interface dragon.nlp.tool.WordNetUtil

length - Variable in class dragon.matrix.AbstractRow

length() - Method in class dragon.ml.seqmodel.data.BasicDataSequence

length() - Method in interface dragon.ml.seqmodel.data.DataSequence

length - Variable in class dragon.onlinedb.BasicArticle

LexRankSummarizer - Class in dragon.ir.summarize

LexRank Summerizer

LexRankSummarizer(OnlineSentenceIndexer) - Constructor for class dragon.ir.summarize.LexRankSummarizer

LexRankSummarizer(OnlineSentenceIndexer, boolean) - Constructor for class dragon.ir.summarize.LexRankSummarizer

LI - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

LIN - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

LinearLoss - Class in dragon.ir.classification.multiclass

Linear Loss Function

LinearLoss() - Constructor for class dragon.ir.classification.multiclass.LinearLoss

LinkKMean - Class in dragon.ir.clustering

Link-based K-Means Clustering Algorithm

LinkKMean(Clustering, SparseMatrix) - Constructor for class dragon.ir.clustering.LinkKMean

The constructor with symmetric pairwise object relationship matrix, i.e.

LinkKMean(Clustering, SparseMatrix, SparseMatrix) - Constructor for class dragon.ir.clustering.LinkKMean

The constructor with asymmetric pairwise object relationship matrix, i.e.

list - Variable in class dragon.matrix.AbstractFlatSparseMatrix

list - Variable in class dragon.nlp.ontology.AbstractVocabulary

list - Variable in class dragon.nlp.ontology.umls.UmlsRelationNet

list - Variable in class dragon.nlp.tool.xtract.EngWordPairGenerator

load(String) - Method in class dragon.ir.index.IRCollection

load(int, int, byte[]) - Method in class dragon.matrix.DoubleRow

load(int, int, byte[]) - Method in class dragon.matrix.IntRow

load(int, int, byte[]) - Method in interface dragon.matrix.Row

This method will be called when the sparse matrix loads rows from a binary file.

loadAttributes(String) - Method in class dragon.nlp.extract.AttributeChecker

loadClustering(String, ConfigureNode) - Method in class dragon.config.ClusteringConfig

loadClusterModel(String, ConfigureNode) - Method in class dragon.config.ClusterModelConfig

loadCodeMatrix(String, ConfigureNode) - Method in class dragon.config.CodeMatrixConfig

loadCollection(String, String) - Method in class dragon.onlinedb.AbstractQuery

loadCollection(String, String) - Method in class dragon.onlinedb.BasicCollectionReader

loadCollection(String) - Method in class dragon.onlinedb.SimpleCollectionReader

loadCollection(String) - Method in class dragon.onlinedb.trec.AbstractTopicReader

loadCollection(String) - Method in class dragon.onlinedb.trec.TrecCollectionReader

loadCollection(String, String) - Method in class dragon.onlinedb.trec.TrecCollectionReader

loadCollection(File) - Method in class dragon.onlinedb.trec.TrecFileReader

loadCollectionReader(String, ConfigureNode) - Method in class dragon.config.CollectionReaderConfig

loadConceptExtractor(String, ConfigureNode) - Method in class dragon.config.ConceptExtractorConfig

loadDocDistance(String, ConfigureNode) - Method in class dragon.config.DocDistanceConfig

loadDocumentParser(String, ConfigureNode) - Method in class dragon.config.DocumentParserConfig

loadDoubleSparseMatrix(String, ConfigureNode) - Method in class dragon.config.SparseMatrixConfig

loadDualConceptExtractor(String, ConfigureNode) - Method in class dragon.config.DualConceptExtractorConfig

loadFactor - Variable in class dragon.matrix.AbstractRow

loadFeatureData() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

loadFeatureData() - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

This method will be called in testing mode.

loadFeatureFilter(String, ConfigureNode) - Method in class dragon.config.FeatureFilterConfig

loadFeatureSelector(String, ConfigureNode) - Method in class dragon.config.FeatureSelectorConfig

loadFeedback(String, ConfigureNode) - Method in class dragon.config.FeedbackConfig

loadFile(String) - Method in class dragon.onlinedb.trec.TrecFileReader

loadGenericMultiDocSummarizer(String, ConfigureNode) - Method in class dragon.config.SummarizerConfig

loadIndexer(String, ConfigureNode) - Method in class dragon.config.IndexerConfig

loadIndexReader(String, ConfigureNode) - Method in class dragon.config.IndexReaderConfig

loadIntSparseMatrix(String, ConfigureNode) - Method in class dragon.config.SparseMatrixConfig

loadKnowledgeBase(String, ConfigureNode) - Method in class dragon.config.KnowledgeBaseConfig

loadLemmatiser(String, ConfigureNode) - Method in class dragon.config.LemmatiserConfig

loadList(String, boolean) - Static method in class dragon.util.SimpleDictionary

loadList(String, SortedArray, boolean) - Static method in class dragon.util.SimpleDictionary

loadLossFunction(String, ConfigureNode) - Method in class dragon.config.LossFunctionConfig

loadMultiClassDecoder(String, ConfigureNode) - Method in class dragon.config.MultiClassDecoderConfig

loadNER(String, ConfigureNode) - Method in class dragon.config.NERConfig

loadOntology(String, ConfigureNode, ConfigureNode) - Method in class dragon.config.OntologyConfig

loadQueryGenerator(String, ConfigureNode) - Method in class dragon.config.QueryGeneratorConfig

loadResource(ConfigureNode) - Method in class dragon.config.ConfigUtil

loadSearcher(String, ConfigureNode) - Method in class dragon.config.SearcherConfig

loadSmoother(String, ConfigureNode) - Method in class dragon.config.SmootherConfig

loadSTYList(Connection) - Method in class dragon.nlp.ontology.umls.UmlsSTYList

loadTagger(String, ConfigureNode) - Method in class dragon.config.TaggerConfig

loadTopicModel(String, ConfigureNode) - Method in class dragon.config.TopicModelConfig

loadTopics(String) - Method in class dragon.onlinedb.trec.AbstractTopicReader

loadTopics(String) - Method in class dragon.onlinedb.trec.EarlyTrecTopicReader

loadTopics(String) - Method in class dragon.onlinedb.trec.Genomics2004TopicReader

loadTopics(String) - Method in class dragon.onlinedb.trec.Genomics2005TopicReader

loadTripleExtractor(String, ConfigureNode) - Method in class dragon.config.TripleExtractorConfig

loadVocabulary(String, ConfigureNode) - Method in class dragon.config.VocabularyConfig

log(double) - Static method in class dragon.util.MathUtil

LOG0 - Static variable in class dragon.util.MathUtil

LOG2 - Static variable in class dragon.util.MathUtil

logSumExp(double, double) - Static method in class dragon.util.MathUtil

logSumExp(double[], double[]) - Static method in class dragon.util.MathUtil

logSumExp(double[]) - Static method in class dragon.util.MathUtil

lookup(Word, Term, ArrayList) - Method in class dragon.nlp.extract.BasicTermExtractor

lookup(String) - Method in class dragon.nlp.ontology.BasicTermList

lookup(BasicTerm) - Method in class dragon.nlp.ontology.BasicTermList

lookup(String) - Method in class dragon.nlp.ontology.mesh.MeshNodeList

lookup(MeshNode) - Method in class dragon.nlp.ontology.mesh.MeshNodeList

lookup(String) - Method in class dragon.nlp.ontology.umls.UmlsCUIList

lookup(UmlsCUI) - Method in class dragon.nlp.ontology.umls.UmlsCUIList

lookup(String) - Method in class dragon.nlp.ontology.umls.UmlsSTYList

lookup(UmlsSTY) - Method in class dragon.nlp.ontology.umls.UmlsSTYList

lookup(String) - Method in class dragon.nlp.ontology.umls.UmlsTokenList

lookup(Token) - Method in class dragon.nlp.ontology.umls.UmlsTokenList

loss(double) - Method in class dragon.ir.classification.multiclass.HingeLoss

loss(double) - Method in class dragon.ir.classification.multiclass.LinearLoss

loss(double) - Method in interface dragon.ir.classification.multiclass.LossFunction

Gets the loss value

LossFunction - Interface in dragon.ir.classification.multiclass

Loss Function Interface

LossFunctionConfig - Class in dragon.config

Loss Function Configuration

LossFunctionConfig() - Constructor for class dragon.config.LossFunctionConfig

LossFunctionConfig(ConfigureNode) - Constructor for class dragon.config.LossFunctionConfig

LossFunctionConfig(String) - Constructor for class dragon.config.LossFunctionConfig

LossMultiClassDecoder - Class in dragon.ir.classification.multiclass

Loss-based Multi-class Decoder

LossMultiClassDecoder(LossFunction) - Constructor for class dragon.ir.classification.multiclass.LossMultiClassDecoder

M

main(String[]) - Static method in class dragon.config.ClusteringEvaAppConfig

main(String[]) - Static method in class dragon.config.CooccurrenceAppConfig

main(String[]) - Static method in class dragon.config.DocRepresentationAppConfig

main(String[]) - Static method in class dragon.config.IndexAppConfig

main(String[]) - Static method in class dragon.config.IndexConvertAppConfig

main(String[]) - Static method in class dragon.config.PhraseExtractAppConfig

main(String[]) - Static method in class dragon.config.QueryAppConfig

main(String[]) - Static method in class dragon.config.RetrievalEvaAppConfig

main(String[]) - Static method in class dragon.config.SummarizationEvaAppConfig

main(String[]) - Static method in class dragon.config.TranslationAppConfig

main(String[]) - Static method in class dragon.ir.index.TransposeIRMatrix

main(String[]) - Static method in class dragon.ir.query.RelBoolQuery

main(String[]) - Static method in class dragon.ir.query.RelSimpleQuery

main(String[]) - Static method in class dragon.matrix.factorize.SVD

main(String[]) - Static method in class dragon.ml.seqmodel.model.NestedModel

main(String[]) - Static method in class dragon.nlp.extract.Abbreviation

main(String[]) - Static method in class dragon.nlp.extract.ClauseFinder

main(String[]) - Static method in class dragon.nlp.extract.CoordinatingChecker

main(String[]) - Static method in class dragon.nlp.ontology.umls.UmlsSTYList

main(String[]) - Static method in class dragon.nlp.tool.BrillTagger

main(String[]) - Static method in class dragon.nlp.tool.lemmatiser.EngLemmatiser

main(String[]) - Static method in class dragon.nlp.tool.PorterStemmer

Test program for demonstrating the Lemmatiser.

main(String[]) - Static method in class dragon.onlinedb.amazon.AmazonCatalogQuery

main(String[]) - Static method in class dragon.onlinedb.amazon.AmazonReviewQuery

main(String[]) - Static method in class dragon.onlinedb.BasicCollectionPreparer

main(String[]) - Static method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

main(String[]) - Static method in class dragon.onlinedb.pubmed.PubMedQuery

main(String[]) - Static method in class dragon.util.HttpUtil

MAO - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

map(int) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

map(int) - Method in interface dragon.ir.classification.featureselection.FeatureSelector

Map the old feature index to the index in the new feature space.

map(int) - Method in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

map(int) - Method in interface dragon.ir.clustering.featurefilter.FeatureFilter

Map the old feature index to the index in the new feature space.

mapLabelToState(DataSequence) - Method in class dragon.ml.seqmodel.model.AbstractModel

mapLabelToState(DataSequence, int, int) - Method in class dragon.ml.seqmodel.model.AbstractModel

mapLabelToState(DataSequence, int, int) - Method in class dragon.ml.seqmodel.model.GenericModel

mapLabelToState(DataSequence) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Maps labels to states.

mapLabelToState(DataSequence, int, int) - Method in interface dragon.ml.seqmodel.model.ModelGraph

This method is used by inner model only

mapLabelToState(DataSequence) - Method in class dragon.ml.seqmodel.model.NestedModel

mapStateToLabel(DataSequence) - Method in class dragon.ml.seqmodel.model.AbstractModel

mapStateToLabel(DataSequence) - Method in interface dragon.ml.seqmodel.model.ModelGraph

Maps states to labels.

mapStateToLabel(DataSequence) - Method in class dragon.ml.seqmodel.model.NestedModel

mark(int) - Method in class dragon.util.FastFileInputStream

markSupported() - Method in class dragon.util.FastFileInputStream

MathUtil - Class in dragon.util

Math related utilities

MathUtil() - Constructor for class dragon.util.MathUtil

matrix - Variable in class dragon.ir.clustering.docdistance.AbstractDocDistance

matrix - Variable in class dragon.matrix.AbstractSuperSparseMatrix

Matrix - Interface in dragon.matrix

Interface of matrix including dense matrix and sparse matrix

matrix - Variable in class dragon.nlp.ontology.umls.UmlsRelationNet

matrixFactory - Variable in class dragon.matrix.AbstractGiantSparseMatrix

matrixFactory - Variable in class dragon.matrix.AbstractSuperSparseMatrix

matrixFilename - Variable in class dragon.matrix.AbstractGiantSparseMatrix

matrixFilename - Variable in class dragon.matrix.AbstractSuperSparseMatrix

max(double[]) - Static method in class dragon.util.MathUtil

max(int[]) - Static method in class dragon.util.MathUtil

maxDocNum - Variable in class dragon.ir.topicmodel.CrossMixtureModel

maxElementInArray(double[]) - Static method in class dragon.util.MathUtil

maxElementInArray(int[]) - Static method in class dragon.util.MathUtil

maxIteration - Variable in class dragon.ir.clustering.BasicKMean

maxIteration - Variable in class dragon.ir.clustering.BisectKMean

maxIteration - Variable in class dragon.ml.seqmodel.crf.AbstractTrainer

maxLen - Variable in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

maxPhraseLength - Variable in class dragon.nlp.ontology.AbstractVocabulary

maxPhraseLength() - Method in class dragon.nlp.ontology.AbstractVocabulary

maxPhraseLength() - Method in class dragon.nlp.ontology.ChineseVocabulary

maxPhraseLength() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the maximum number of words a phrase can contain.

maxSegmentLength - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

maxSpan - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

maxSpan - Variable in class dragon.nlp.tool.xtract.EngWordPairGenerator

maxSpan - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

maxTermNum - Variable in class dragon.ir.topicmodel.CrossMixtureModel

Mcsrch - Class in dragon.ml.seqmodel.crf

This class implements an algorithm for multi-dimensional line search.

Mcsrch() - Constructor for class dragon.ml.seqmodel.crf.Mcsrch

mcsrch(int, double[], double, double[], double[], int, double[], double, double, int, int[], int[], double[]) - Static method in class dragon.ml.seqmodel.crf.Mcsrch

Minimize a function along a search direction.

mcstep(double[], double[], double[], double[], double[], double[], double[], double, double, boolean[], double, double, int[]) - Static method in class dragon.ml.seqmodel.crf.Mcsrch

The purpose of this function is to compute a safeguarded step for a linesearch and to update an interval of uncertainty for a minimizer of the function.

MedArticleParser - Class in dragon.onlinedb.trec

TREC medical article parser

MedArticleParser() - Constructor for class dragon.onlinedb.trec.MedArticleParser

MedPostTagger - Class in dragon.nlp.tool

MedPost tagger adopted from gov.nih.nlm.nls.mps.POSTagger

MedPostTagger(String) - Constructor for class dragon.nlp.tool.MedPostTagger

MedPostTagger() - Constructor for class dragon.nlp.tool.MedPostTagger

merge(Cell) - Method in interface dragon.matrix.Cell

Merge the score of the input cell with the current cell.

merge(Cell) - Method in class dragon.matrix.DoubleCell

merge(Cell) - Method in class dragon.matrix.IntCell

merge(String, String, boolean) - Static method in class dragon.util.SimpleDictionary

mergeConceptByEntryID(ArrayList) - Method in class dragon.nlp.extract.AbstractConceptExtractor

mergeConceptByEntryID(ArrayList) - Method in interface dragon.nlp.extract.ConceptExtractor

The concepts with identical entry id will be merged.

mergeConceptByName(ArrayList) - Method in class dragon.nlp.extract.AbstractConceptExtractor

mergeConceptByName(ArrayList) - Method in interface dragon.nlp.extract.ConceptExtractor

The concepts with identical names will be merged.

mergeMode - Variable in class dragon.matrix.AbstractSparseMatrix

mergeTriples(SortedArray, ArrayList) - Method in class dragon.nlp.extract.AbstractTripleExtractor

mergeTriples(SortedArray, ArrayList) - Method in interface dragon.nlp.extract.TripleExtractor

Merge duplicated triples.

MeshNode - Class in dragon.nlp.ontology.mesh

MeSH node is designed for (Medical Subject Headings) MeSH ontology node

MeshNode(String, String) - Constructor for class dragon.nlp.ontology.mesh.MeshNode

MeshNode(String) - Constructor for class dragon.nlp.ontology.mesh.MeshNode

MeshNodeList - Class in dragon.nlp.ontology.mesh

List of mesh nodes

MeshNodeList(String) - Constructor for class dragon.nlp.ontology.mesh.MeshNodeList

MeshSimilarity - Class in dragon.nlp.ontology.mesh

Similarity measures of comparing two MeSH nodes

MeshSimilarity(String, int) - Constructor for class dragon.nlp.ontology.mesh.MeshSimilarity

meta - Variable in class dragon.onlinedb.BasicArticle

mForHessian - Variable in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

min(double[]) - Static method in class dragon.util.MathUtil

min(int[]) - Static method in class dragon.util.MathUtil

MIN_LEN - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

MinDivergenceFeedback - Class in dragon.ir.search.feedback

Feedback based on Minimum Divergence

MinDivergenceFeedback(Searcher, int, int, double, double) - Constructor for class dragon.ir.search.feedback.MinDivergenceFeedback

miniMode - Variable in class dragon.matrix.AbstractSparseMatrix

minPhraseLength - Variable in class dragon.nlp.ontology.AbstractVocabulary

minPhraseLength() - Method in class dragon.nlp.ontology.AbstractVocabulary

minPhraseLength() - Method in class dragon.nlp.ontology.ChineseVocabulary

minPhraseLength() - Method in interface dragon.nlp.ontology.Vocabulary

Gets the minimum number of words a phrase can contain.

model - Variable in class dragon.ir.classification.NBClassifier

model - Variable in class dragon.ml.seqmodel.crf.AbstractCRF

model - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

ModelGraph - Interface in dragon.ml.seqmodel.model

Interface of model graph

moveToArticle(int) - Method in class dragon.onlinedb.AbstractQuery

moveToArticle(int) - Method in interface dragon.onlinedb.ArticleQuery

Move the pointer to the give position of the current page.

moveToNextArticle() - Method in class dragon.onlinedb.AbstractQuery

moveToNextArticle() - Method in interface dragon.onlinedb.ArticleQuery

The pointer will be set on the next article.

moveToNextPage() - Method in class dragon.onlinedb.AbstractQuery

moveToNextPage() - Method in interface dragon.onlinedb.ArticleQuery

Move to the next page and the pointer is set on the first article of the page.

moveToPage(int) - Method in class dragon.onlinedb.amazon.AmazonCatalogQuery

moveToPage(int) - Method in class dragon.onlinedb.amazon.AmazonReviewQuery

moveToPage(int) - Method in interface dragon.onlinedb.ArticleQuery

Move to the given page and the pointer is set on the first article of the page.

moveToPage(int) - Method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

moveToPage(int) - Method in class dragon.onlinedb.pubmed.PubMedQuery

moveToPage(int) - Method in class dragon.onlinedb.searchengine.GoogleEngine

multiArray(double[], double) - Static method in class dragon.util.MathUtil

MultiClassDecoder - Interface in dragon.ir.classification.multiclass

Interface for Multi-class Decoder

MultiClassDecoderConfig - Class in dragon.config

Multi-class Decoder Configuration

MultiClassDecoderConfig() - Constructor for class dragon.config.MultiClassDecoderConfig

MultiClassDecoderConfig(ConfigureNode) - Constructor for class dragon.config.MultiClassDecoderConfig

MultiClassDecoderConfig(String) - Constructor for class dragon.config.MultiClassDecoderConfig

MultinomialClusterModel - Class in dragon.ir.clustering.clustermodel

Multinormial model based clustering

MultinomialClusterModel(int, IndexReader) - Constructor for class dragon.ir.clustering.clustermodel.MultinomialClusterModel

MultinomialClusterModel(int, IndexReader, double) - Constructor for class dragon.ir.clustering.clustermodel.MultinomialClusterModel

MultinomialClusterModel(int, IndexReader, IndexReader, DoubleSparseMatrix, double, double) - Constructor for class dragon.ir.clustering.clustermodel.MultinomialClusterModel

MultinomialClusterModel(int, IndexReader, IndexReader, KnowledgeBase, double, double) - Constructor for class dragon.ir.clustering.clustermodel.MultinomialClusterModel

MULTIPLE_AVG - Static variable in class dragon.ir.summarize.ROUGE

MULTIPLE_MAX - Static variable in class dragon.ir.summarize.ROUGE

MULTIPLE_MIN - Static variable in class dragon.ir.summarize.ROUGE

multiply(double) - Method in class dragon.matrix.vector.DoubleVector

multiply(int) - Method in class dragon.matrix.vector.IntVector

MutualInfoFeatureSelector - Class in dragon.ir.classification.featureselection

A Feature Selector which uses mutual information to select top features

MutualInfoFeatureSelector(double, boolean) - Constructor for class dragon.ir.classification.featureselection.MutualInfoFeatureSelector

N

name - Variable in class dragon.ml.seqmodel.model.AbstractModel

NAME_ASIS - Static variable in class dragon.nlp.Phrase

NAME_ASIS - Static variable in class dragon.nlp.Term

NAME_LEMMA - Static variable in class dragon.nlp.Phrase

NAME_LEMMA - Static variable in class dragon.nlp.Term

NAME_NORM - Static variable in class dragon.nlp.Term

NBClassifier - Class in dragon.ir.classification

Naive Bayesian classifier which uses Laplacian smoothing

NBClassifier(String) - Constructor for class dragon.ir.classification.NBClassifier

NBClassifier(IndexReader) - Constructor for class dragon.ir.classification.NBClassifier

NBClassifier(SparseMatrix) - Constructor for class dragon.ir.classification.NBClassifier

needScaling() - Method in class dragon.ml.seqmodel.crf.AbstractTrainer

needScaling() - Method in interface dragon.ml.seqmodel.crf.Trainer

Gets the scaling option.

needTraining() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

needTraining() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

needTraining() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Tests if the current feature type needs training

NER - Interface in dragon.nlp.tool

Interface of Named Entity Recognizer

NERConfig - Class in dragon.config

NER configuration

NERConfig() - Constructor for class dragon.config.NERConfig

NERConfig(ConfigureNode) - Constructor for class dragon.config.NERConfig

NERConfig(String) - Constructor for class dragon.config.NERConfig

NestedModel - Class in dragon.ml.seqmodel.model

Nested model graph

NestedModel(int, String) - Constructor for class dragon.ml.seqmodel.model.NestedModel

NewsGroupArticle - Class in dragon.onlinedb.dm

20 news group article parser

NewsGroupArticle(File) - Constructor for class dragon.onlinedb.dm.NewsGroupArticle

next(int, int) - Method in class dragon.ml.seqmodel.crf.EdgeGenerator

next() - Method in class dragon.ml.seqmodel.data.BasicDataset

next() - Method in interface dragon.ml.seqmodel.data.Dataset

Reads out the next sequence

next() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

next() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

next() - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Gets the next feature.

next() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Gets the next feature

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeEdge

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeEnd

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeKnownWord

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypePosition

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypePOSPattern

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypePrior

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLengthPoly

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeStart

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeStateLoop

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeTokenLoop

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeUnknownWord

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWindow

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

next() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWordScore

next() - Method in interface dragon.ml.seqmodel.model.EdgeIterator

Gets the next edge

next - Variable in class dragon.nlp.Paragraph

next - Variable in class dragon.nlp.Sentence

next - Variable in class dragon.nlp.Word

nextIsOuter() - Method in interface dragon.ml.seqmodel.model.EdgeIterator

nextLabel(int, int) - Method in class dragon.ml.seqmodel.crf.EdgeGenerator

nfevaluations() - Static method in class dragon.ml.seqmodel.crf.LBFGS

This method returns the total number of evaluations of the objective function since the last time LBFGS was restarted.

NigamActiveLearning - Class in dragon.ir.classification

Nigam Active Learning which can utilize unlabeled documents during text classification

NigamActiveLearning(String) - Constructor for class dragon.ir.classification.NigamActiveLearning

NigamActiveLearning(IndexReader, double) - Constructor for class dragon.ir.classification.NigamActiveLearning

NMF - Class in dragon.matrix.factorize

None negative matrix factorization

NMF(int) - Constructor for class dragon.matrix.factorize.NMF

NoEdgeModel - Class in dragon.ml.seqmodel.model

Model graph without edge

NoEdgeModel(int) - Constructor for class dragon.ml.seqmodel.model.NoEdgeModel

nonboundaryPunctuations - Variable in class dragon.nlp.ontology.AbstractVocabulary

norm(double[]) - Method in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

normalizeColumn(DoubleDenseMatrix) - Method in class dragon.matrix.factorize.AbstractFactorization

normalizeColumns() - Method in class dragon.matrix.DoubleFlatSparseMatrix

normalizeRows() - Method in class dragon.matrix.DoubleFlatSparseMatrix

NullFeatureFilter - Class in dragon.ir.clustering.featurefilter

A Null Feature Selector

NullFeatureFilter() - Constructor for class dragon.ir.clustering.featurefilter.NullFeatureFilter

NullFeatureSelector - Class in dragon.ir.classification.featureselection

A Null Feature Selector

NullFeatureSelector() - Constructor for class dragon.ir.classification.featureselection.NullFeatureSelector

numLabels - Variable in class dragon.ml.seqmodel.model.AbstractModel

O

OBJ - Static variable in class dragon.nlp.Word

OkapiSmoother - Class in dragon.ir.search.smooth

Okapi Smoother

OkapiSmoother(IRCollection) - Constructor for class dragon.ir.search.smooth.OkapiSmoother

OkapiSmoother(IRCollection, double, double) - Constructor for class dragon.ir.search.smooth.OkapiSmoother

OnlineIndexer - Class in dragon.ir.index

The class is designed for indexing in computer memory especially for small document set when writing to disk is not necessary.

OnlineIndexer(TripleExtractor, boolean) - Constructor for class dragon.ir.index.OnlineIndexer

OnlineIndexer(ConceptExtractor, boolean) - Constructor for class dragon.ir.index.OnlineIndexer

OnlineIndexReader - Class in dragon.ir.index

The class is used to read indexing information from memory

OnlineIndexReader(OnlineIndexer) - Constructor for class dragon.ir.index.OnlineIndexReader

OnlineIndexReader(OnlineIndexer, CollectionReader) - Constructor for class dragon.ir.index.OnlineIndexReader

OnlineIndexWriteController - Class in dragon.ir.index

The class is the same as BasicIndexWriteController except that it does not store information to disk

OnlineIndexWriteController(boolean, boolean) - Constructor for class dragon.ir.index.OnlineIndexWriteController

OnlineIndexWriter - Class in dragon.ir.index

The class is the same as BasicIndexWriter except that it does not store information to disk.

OnlineIndexWriter(boolean) - Constructor for class dragon.ir.index.OnlineIndexWriter

OnlineIRDocIndexList - Class in dragon.ir.index

The class is used to add or get a given IRDoc

OnlineIRDocIndexList() - Constructor for class dragon.ir.index.OnlineIRDocIndexList

OnlineIRRelationIndexList - Class in dragon.ir.index

The class is used to add or get a given IR relation

OnlineIRRelationIndexList() - Constructor for class dragon.ir.index.OnlineIRRelationIndexList

OnlineIRTermIndexList - Class in dragon.ir.index

The class is used to add or get a given IR term

OnlineIRTermIndexList() - Constructor for class dragon.ir.index.OnlineIRTermIndexList

OnlineSentenceBase - Class in dragon.ir.index.sentence

Base sentence information class

OnlineSentenceBase() - Constructor for class dragon.ir.index.sentence.OnlineSentenceBase

OnlineSentenceIndexer - Class in dragon.ir.index.sentence

Indexer for indexing sentence without storing to disk

OnlineSentenceIndexer(ConceptExtractor, boolean) - Constructor for class dragon.ir.index.sentence.OnlineSentenceIndexer

OnlineSentenceIndexer(TripleExtractor, boolean) - Constructor for class dragon.ir.index.sentence.OnlineSentenceIndexer

OnlineSentenceIndexReader - Class in dragon.ir.index.sentence

Index reader for reading sentence index information on line

OnlineSentenceIndexReader(OnlineSentenceIndexer) - Constructor for class dragon.ir.index.sentence.OnlineSentenceIndexReader

OnlineSentenceIndexReader(OnlineSentenceIndexer, CollectionReader) - Constructor for class dragon.ir.index.sentence.OnlineSentenceIndexReader

OnlineSentenceWriteController - Class in dragon.ir.index.sentence

Write controller for storing sentence index to disk

OnlineSentenceWriteController(boolean, boolean) - Constructor for class dragon.ir.index.sentence.OnlineSentenceWriteController

OnlineSequenceBase - Class in dragon.ir.index.sequence

The online sequence base information class

OnlineSequenceBase() - Constructor for class dragon.ir.index.sequence.OnlineSequenceBase

OnlineSequenceIndexer - Class in dragon.ir.index.sequence

The online indexer for sequencial data

OnlineSequenceIndexer(ConceptExtractor) - Constructor for class dragon.ir.index.sequence.OnlineSequenceIndexer

OnlineSequenceIndexReader - Class in dragon.ir.index.sequence

The online index reader for sequencial data

OnlineSequenceIndexReader(ConceptExtractor) - Constructor for class dragon.ir.index.sequence.OnlineSequenceIndexReader

OnlineSequenceIndexReader(ConceptExtractor, CollectionReader) - Constructor for class dragon.ir.index.sequence.OnlineSequenceIndexReader

OnlineSequenceIndexReader(OnlineSequenceIndexer) - Constructor for class dragon.ir.index.sequence.OnlineSequenceIndexReader

OnlineSequenceIndexReader(OnlineSequenceIndexer, CollectionReader) - Constructor for class dragon.ir.index.sequence.OnlineSequenceIndexReader

OnlineSequenceIndexWriter - Class in dragon.ir.index.sequence

The online index writer for sequencial data

OnlineSequenceIndexWriter() - Constructor for class dragon.ir.index.sequence.OnlineSequenceIndexWriter

ontology - Variable in class dragon.nlp.extract.AbstractTermExtractor

Ontology - Interface in dragon.nlp.ontology

Interface of Ontology

OntologyConfig - Class in dragon.config

Ontology application configuration

OntologyConfig() - Constructor for class dragon.config.OntologyConfig

OntologyConfig(ConfigureNode) - Constructor for class dragon.config.OntologyConfig

OntologyConfig(String) - Constructor for class dragon.config.OntologyConfig

openConnection(URL) - Method in class de.julielab.protocols.classpath.Handler

Operation - Interface in dragon.nlp.tool.lemmatiser

Interface of lemmatising operations

Operator - Class in dragon.ir.query

Query operator

Operator(String) - Constructor for class dragon.ir.query.Operator

optr - Variable in class dragon.ir.query.AbstractExpression

optr - Variable in class dragon.ir.query.AbstractIRQuery

OVACodeMatrix - Class in dragon.ir.classification.multiclass

One-versus-all Code Matrix

OVACodeMatrix() - Constructor for class dragon.ir.classification.multiclass.OVACodeMatrix

OVACodeMatrix(int) - Constructor for class dragon.ir.classification.multiclass.OVACodeMatrix

overlappedPhrase - Variable in class dragon.nlp.extract.BasicPhraseExtractor

P

pageNum - Variable in class dragon.onlinedb.AbstractQuery

pageWidth - Variable in class dragon.onlinedb.AbstractQuery

pairGenerator - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

pairKeyList - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

paraChecker - Variable in class dragon.nlp.extract.AbstractTermExtractor

paraDelimitor - Variable in class dragon.nlp.extract.EngDocumentParser

Paragraph - Class in dragon.nlp

Data structure for paragraph of document

Paragraph() - Constructor for class dragon.nlp.Paragraph

parallelTermPredict(ArrayList) - Method in class dragon.nlp.extract.CoordinatingChecker

parse(String) - Method in class dragon.ir.query.AbstractIRQuery

parse(String[]) - Method in class dragon.ir.query.AbstractIRQuery

parse(String) - Method in class dragon.ir.query.AbstractPredicate

parse(String[]) - Method in class dragon.ir.query.AbstractPredicate

parse(String[]) - Method in class dragon.ir.query.BoolQualifierPredicate

parse(String[]) - Method in class dragon.ir.query.BoolRelationPredicate

parse(String[]) - Method in class dragon.ir.query.BoolTermPredicate

parse(String) - Method in interface dragon.ir.query.IRQuery

parse(String[]) - Method in class dragon.ir.query.RelBoolQuery

parse(String[]) - Method in class dragon.ir.query.RelSimpleQuery

parse(String[]) - Method in class dragon.ir.query.SimpleRelationPredicate

parse(String[]) - Method in class dragon.ir.query.SimpleTermPredicate

parse(String) - Method in interface dragon.nlp.DocumentParser

Parses a text into a Document object

parse(String) - Method in class dragon.nlp.extract.EngDocumentParser

parse(String) - Method in interface dragon.onlinedb.ArticleParser

Parse a sequence of text into an article

parse(String) - Method in class dragon.onlinedb.BasicArticleParser

parse(String) - Method in class dragon.onlinedb.citeulike.CiteULikeArticleParser

parse the CiteULIke format article

parse(File) - Method in class dragon.onlinedb.dm.NewsGroupArticle

parse(String) - Method in class dragon.onlinedb.dm.ReutersArticleParser

parse(String) - Method in class dragon.onlinedb.isi.ISIArticleParser

parse(String) - Method in class dragon.onlinedb.SimpleArticleParser

parse(String) - Method in class dragon.onlinedb.trec.CoarseSgmArticleParser

parse(String) - Method in class dragon.onlinedb.trec.DUC2004HTArticleParser

parse(String) - Method in class dragon.onlinedb.trec.DUC2004MTArticleParser

parse(String) - Method in class dragon.onlinedb.trec.MedArticleParser

parse(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

parseParagraph(String) - Method in interface dragon.nlp.DocumentParser

Parses a text into a Paragraph object

parseParagraph(String) - Method in class dragon.nlp.extract.EngDocumentParser

parser - Variable in class dragon.ir.index.sentence.AbstractSentenceIndexer

parser - Variable in class dragon.nlp.extract.AbstractConceptExtractor

parser - Variable in class dragon.nlp.extract.AbstractDualConceptExtractor

parser - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

parser - Variable in class dragon.onlinedb.AbstractQuery

parser - Variable in class dragon.onlinedb.BasicCollectionReader

parser - Variable in class dragon.onlinedb.BasicCollectionWriter

parser - Variable in class dragon.onlinedb.searchengine.AbstractSearchEngine

parseSentence(String) - Method in interface dragon.nlp.DocumentParser

Parses a text into a Sentence object

parseSentence(String) - Method in class dragon.nlp.extract.CnSimpleDocumentParser

parseSentence(String) - Method in class dragon.nlp.extract.EngDocumentParser

parseTokens(String) - Method in interface dragon.nlp.DocumentParser

Prases a text into a sequence of tokens.

parseTokens(String) - Method in class dragon.nlp.extract.CnSimpleDocumentParser

parseTokens(String) - Method in class dragon.nlp.extract.EngDocumentParser

parseWord(String) - Method in class dragon.nlp.extract.CnSimpleDocumentParser

parseWord(String) - Method in class dragon.nlp.extract.EngDocumentParser

PartialRankSearcher - Class in dragon.ir.search

Partial rank searcher

PartialRankSearcher(IndexReader, Smoother) - Constructor for class dragon.ir.search.PartialRankSearcher

Phrase - Class in dragon.nlp

Data structure for phrase

Phrase(Word, Word) - Constructor for class dragon.nlp.Phrase

Phrase(Word) - Constructor for class dragon.nlp.Phrase

phraseExtract(ConfigureNode) - Method in class dragon.config.PhraseExtractAppConfig

phraseExtract(String, int, double, double, double, double, int, String, String) - Method in class dragon.config.PhraseExtractAppConfig

phraseExtract(String, int, CollectionReader[], Lemmatiser, Tagger, String, double, double, double, double, int, String, String) - Method in class dragon.config.PhraseExtractAppConfig

PhraseExtractAppConfig - Class in dragon.config

Phrase extraction application configuration

PhraseExtractAppConfig() - Constructor for class dragon.config.PhraseExtractAppConfig

PhraseExtractor - Interface in dragon.nlp.extract

Interface of Mutliword Phrase Extractor

PhraseQEGenerator - Class in dragon.ir.query

Phrase Query generator

PhraseQEGenerator(KnowledgeBase, TokenExtractor, double, int) - Constructor for class dragon.ir.query.PhraseQEGenerator

PhraseQEGenerator(KnowledgeBase, PhraseExtractor, TokenExtractor, double, int) - Constructor for class dragon.ir.query.PhraseQEGenerator

PhraseTransFeedback - Class in dragon.ir.search.feedback

Feedback based on phrase-word translation

PhraseTransFeedback(Searcher, int, int, double, IndexReader, double) - Constructor for class dragon.ir.search.feedback.PhraseTransFeedback

PhraseTransFeedback(Searcher, int, int, double, IndexReader, double, DoubleSparseMatrix) - Constructor for class dragon.ir.search.feedback.PhraseTransFeedback

PivotedNormSmoother - Class in dragon.ir.search.smooth

Pivoted Normalization Smoother

PivotedNormSmoother(IRCollection) - Constructor for class dragon.ir.search.smooth.PivotedNormSmoother

PivotedNormSmoother(IRCollection, double) - Constructor for class dragon.ir.search.smooth.PivotedNormSmoother

PorterStemmer - Class in dragon.nlp.tool

Porter stemmer

PorterStemmer() - Constructor for class dragon.nlp.tool.PorterStemmer

POS_ADJECTIVE - Static variable in interface dragon.nlp.tool.Tagger

POS_ADJECTIVE - Static variable in interface dragon.nlp.tool.WordNetUtil

POS_ADVERB - Static variable in interface dragon.nlp.tool.Tagger

POS_ADVERB - Static variable in interface dragon.nlp.tool.WordNetUtil

POS_CC - Static variable in interface dragon.nlp.tool.Tagger

POS_DT - Static variable in interface dragon.nlp.tool.Tagger

POS_IN - Static variable in interface dragon.nlp.tool.Tagger

POS_NOUN - Static variable in interface dragon.nlp.tool.Tagger

POS_NOUN - Static variable in interface dragon.nlp.tool.WordNetUtil

POS_NUM - Static variable in interface dragon.nlp.tool.Tagger

POS_PRONOUN - Static variable in interface dragon.nlp.tool.Tagger

POS_VERB - Static variable in interface dragon.nlp.tool.Tagger

POS_VERB - Static variable in interface dragon.nlp.tool.WordNetUtil

posTag - Variable in class dragon.ml.seqmodel.data.POSToken

POSToken - Class in dragon.ml.seqmodel.data

Token with Part of Speech Information

POSToken(String) - Constructor for class dragon.ml.seqmodel.data.POSToken

POSToken(String, int) - Constructor for class dragon.ml.seqmodel.data.POSToken

powerMethod - Variable in class dragon.ir.summarize.LexRankSummarizer

PowerMethod - Class in dragon.matrix.vector

Power Method

PowerMethod(double, double) - Constructor for class dragon.matrix.vector.PowerMethod

precision() - Method in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

precision() - Method in interface dragon.ml.seqmodel.evaluate.Evaluator

Predicate - Interface in dragon.ir.query

Interface of predicate which is the least unit of IR query

PREDICATE - Static variable in class dragon.nlp.Word

PREDICATE_BOOL - Static variable in interface dragon.ir.query.Predicate

PREDICATE_QUALIFIER - Static variable in interface dragon.ir.query.Predicate

PREDICATE_RELATION - Static variable in interface dragon.ir.query.Predicate

PREDICATE_SIMPLE - Static variable in interface dragon.ir.query.Predicate

PREDICATE_TERM - Static variable in interface dragon.ir.query.Predicate

predicateType - Variable in class dragon.ir.query.AbstractPredicate

predict(ArrayList) - Method in class dragon.nlp.extract.CompoundTermFinder

preprocessSentence(Sentence) - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

Preprocess a sentence including tagging, lemmatising and indexing.

prev - Variable in class dragon.nlp.Paragraph

prev - Variable in class dragon.nlp.Sentence

prev - Variable in class dragon.nlp.Word

print(PrintWriter) - Method in class dragon.ir.classification.ClassificationEva

print(PrintWriter) - Method in class dragon.matrix.AbstractFlatSparseMatrix

print(PrintWriter) - Method in class dragon.matrix.DoubleFlatDenseMatrix

print(PrintWriter) - Method in class dragon.matrix.IntFlatDenseMatrix

print(PrintWriter) - Method in class dragon.nlp.extract.AbstractConceptExtractor

print(PrintWriter, ArrayList) - Method in class dragon.nlp.extract.AbstractConceptExtractor

print(PrintWriter, ArrayList) - Method in class dragon.nlp.extract.AbstractTermExtractor

print(PrintWriter) - Method in class dragon.nlp.extract.AbstractTripleExtractor

print(PrintWriter, ArrayList, ArrayList) - Method in class dragon.nlp.extract.AbstractTripleExtractor

print(PrintWriter, ArrayList, ArrayList) - Method in class dragon.nlp.extract.BasicTripleExtractor

print(PrintWriter) - Method in interface dragon.nlp.extract.ConceptExtractor

Print out the extract concepts to the speficid print writer.

print(PrintWriter, ArrayList) - Method in interface dragon.nlp.extract.ConceptExtractor

Print out the given list of concepts to the speficid print writer.

print(PrintWriter) - Method in interface dragon.nlp.extract.TripleExtractor

Prints out extracted concepts and triples to the specified print writer.

print(PrintWriter, ArrayList, ArrayList) - Method in interface dragon.nlp.extract.TripleExtractor

Prints out the specified concepts and triples to the print writer.

printGraph() - Method in class dragon.ml.seqmodel.model.AbstractModel

printResult() - Method in class dragon.ir.summarize.ROUGE

printResultSet(Connection, String, PrintWriter) - Static method in class dragon.util.DBUtil

printResultSet(ResultSet, PrintWriter) - Static method in class dragon.util.DBUtil

printResultSet(ResultSet, PrintWriter, int) - Static method in class dragon.util.DBUtil

printStatus(String) - Method in class dragon.ir.topicmodel.AbstractModel

printWordPair(WordPairStat[], String) - Method in class dragon.nlp.tool.xtract.SimpleXtract

processedDoc - Variable in class dragon.ir.index.AbstractIndexWriteController

processText(String) - Method in class dragon.onlinedb.BasicArticleParser

product(DoubleFlatSparseMatrix) - Method in class dragon.matrix.DoubleFlatSparseMatrix

product(DoubleDenseMatrix) - Method in class dragon.matrix.DoubleFlatSparseMatrix

product(DoubleDenseMatrix, DoubleDenseMatrix, DoubleDenseMatrix) - Method in class dragon.matrix.factorize.AbstractFactorization

product(SparseMatrix, DoubleDenseMatrix, DoubleDenseMatrix) - Method in class dragon.matrix.factorize.AbstractFactorization

PubMedArticle - Class in dragon.onlinedb.pubmed

Data structure for PubMed article

PubMedArticle() - Constructor for class dragon.onlinedb.pubmed.PubMedArticle

PubMedArticle(String) - Constructor for class dragon.onlinedb.pubmed.PubMedArticle

PubMedQuery - Class in dragon.onlinedb.pubmed

PubMed article query

PubMedQuery(String, int) - Constructor for class dragon.onlinedb.pubmed.PubMedQuery

PubMedQuery(int) - Constructor for class dragon.onlinedb.pubmed.PubMedQuery

punctuations - Static variable in class dragon.nlp.extract.CnSimpleDocumentParser

punctuations - Static variable in class dragon.nlp.extract.EngDocumentParser

put(String, Term) - Method in class dragon.nlp.extract.Abbreviation

Q

query - Variable in class dragon.ir.search.AbstractSearcher

QueryAppConfig - Class in dragon.config

Query application configuration

QueryAppConfig() - Constructor for class dragon.config.QueryAppConfig

QueryExpansion - Interface in dragon.ir.search.expand

Interface of query expansion method

QueryExpansionSearcher - Class in dragon.ir.search

Query expansion searcher

QueryExpansionSearcher(Searcher, QueryExpansion) - Constructor for class dragon.ir.search.QueryExpansionSearcher

QueryFirstTransSmoother - Class in dragon.ir.search.smooth

A Smoother using relation-term translations

QueryFirstTransSmoother(IndexReader, DoubleSparseMatrix, boolean, double, Smoother) - Constructor for class dragon.ir.search.smooth.QueryFirstTransSmoother

QueryFirstTransSmoother(IndexReader, IndexReader, DoubleSparseMatrix, double, Smoother) - Constructor for class dragon.ir.search.smooth.QueryFirstTransSmoother

QueryGenerator - Interface in dragon.ir.query

Interface of query generator which converts natural language into structured query

QueryGeneratorConfig - Class in dragon.config

Query generator configuration

QueryGeneratorConfig() - Constructor for class dragon.config.QueryGeneratorConfig

QueryGeneratorConfig(ConfigureNode) - Constructor for class dragon.config.QueryGeneratorConfig

QueryGeneratorConfig(String) - Constructor for class dragon.config.QueryGeneratorConfig

queryKey - Variable in class dragon.onlinedb.amazon.AmazonCatalogQuery

queryKey - Variable in class dragon.onlinedb.amazon.AmazonReviewQuery

queryKey - Variable in class dragon.onlinedb.pubmed.PubMedQuery

querytermFirstOptimal - Variable in class dragon.ir.search.smooth.AbstractSmoother

queryWeight - Variable in class dragon.ir.search.smooth.AbstractSmoother

QueryWriter - Class in dragon.ir.query

Query writer which supports query related document sets indexing

QueryWriter(boolean, boolean) - Constructor for class dragon.ir.query.QueryWriter

R

raf - Variable in class dragon.onlinedb.BasicCollectionReader

rafCollection - Variable in class dragon.onlinedb.BasicCollectionWriter

rafIndex - Variable in class dragon.matrix.AbstractGiantSparseMatrix

rafMatrix - Variable in class dragon.matrix.AbstractGiantSparseMatrix

randomSeed - Variable in class dragon.ir.clustering.AbstractClustering

rank() - Method in interface dragon.ir.classification.Classifier

Rank all class labels.

rank() - Method in class dragon.ir.classification.multiclass.LossMultiClassDecoder

rank() - Method in interface dragon.ir.classification.multiclass.MultiClassDecoder

Rank all class labels

rank() - Method in class dragon.ir.classification.NBClassifier

rank(boolean) - Method in class dragon.matrix.vector.DoubleVector

rank(boolean) - Method in class dragon.matrix.vector.IntVector

rankElementInArray(double[], boolean) - Static method in class dragon.util.MathUtil

rankElementInArray(int[], boolean) - Static method in class dragon.util.MathUtil

RARE_THRESHOLD - Static variable in class dragon.ml.seqmodel.feature.FeatureTypeWord

rawText - Variable in class dragon.onlinedb.BasicArticle

read() - Method in interface dragon.ml.seqmodel.data.DataReader

Reads out all sequences

read() - Method in class dragon.ml.seqmodel.data.FlatSegmentReader

read(String) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

read(String) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

read(String) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

read(BufferedReader) - Method in class dragon.ml.seqmodel.feature.FeatureMap

read() - Method in class dragon.util.FastFileInputStream

read(byte[]) - Method in class dragon.util.FastFileInputStream

read(byte[], int, int) - Method in class dragon.util.FastFileInputStream

readBinaryMatrixFile(String) - Method in class dragon.matrix.AbstractFlatSparseMatrix

readFeatures(String) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

readFeatures(String) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Reads feature list from a text file

readModelParameter(String) - Method in class dragon.ml.seqmodel.crf.AbstractCRF

readModelParameter(String) - Method in interface dragon.ml.seqmodel.crf.Labeler

Reads the parameters of the CRF model from a text file

readRow() - Method in interface dragon.ml.seqmodel.data.DataReader

Reads out one sequence and the pointer autoamtically moves to the next sequence.

readRow() - Method in class dragon.ml.seqmodel.data.FlatSegmentReader

readTextFile(String) - Static method in class dragon.util.FileUtil

readTextFile(File) - Static method in class dragon.util.FileUtil

readTextFile(String, String) - Static method in class dragon.util.FileUtil

readTextFile(File, String) - Static method in class dragon.util.FileUtil

readTextMatrixFile(String) - Method in class dragon.matrix.AbstractFlatSparseMatrix

readTrainingResult() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

readTrainingResult() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

readTrainingResult() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Reads the training result in testing mode

readTrainingResult() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

readVocabularyMeta(String) - Method in class dragon.nlp.ontology.AbstractVocabulary

recall() - Method in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

recall() - Method in interface dragon.ml.seqmodel.evaluate.Evaluator

refine - Variable in class dragon.ir.clustering.BisectKMean

relationCheck_enabled - Variable in class dragon.nlp.extract.AbstractTripleExtractor

relationdocMatrix - Variable in class dragon.ir.index.AbstractIndexReader

RelationGenerativeSum - Class in dragon.ir.summarize

Generative relation based summarization

RelationGenerativeSum(IndexReader, double) - Constructor for class dragon.ir.summarize.RelationGenerativeSum

relationIndexList - Variable in class dragon.ir.index.AbstractIndexReader

relationIndexList - Variable in class dragon.ir.index.AbstractIndexWriter

relationKeyList - Variable in class dragon.ir.index.AbstractIndexWriteController

relationSupported - Variable in class dragon.ir.index.AbstractIndexer

relationSupported - Variable in class dragon.ir.index.AbstractIndexReader

relationSupported - Variable in class dragon.ir.index.AbstractIndexWriteController

relationSupported - Variable in class dragon.ir.index.AbstractIndexWriter

relationSupported - Variable in class dragon.ir.index.DualIndexer

relationSupported - Variable in class dragon.ir.index.FileIndex

relationSupported - Variable in class dragon.ir.query.BasicQueryGenerator

RelationTransFeedback - Class in dragon.ir.search.feedback

Feedback based on relation-term translation

RelationTransFeedback(Searcher, int, int, double) - Constructor for class dragon.ir.search.feedback.RelationTransFeedback

RelationTransFeedback(Searcher, int, int, double, DoubleSparseMatrix) - Constructor for class dragon.ir.search.feedback.RelationTransFeedback

RelationTransFeedback(Searcher, int, int, double, double) - Constructor for class dragon.ir.search.feedback.RelationTransFeedback

RelationTransFeedback(Searcher, int, int, double, double, DoubleSparseMatrix) - Constructor for class dragon.ir.search.feedback.RelationTransFeedback

RelBoolQuery - Class in dragon.ir.query

Bool realtion query

RelBoolQuery() - Constructor for class dragon.ir.query.RelBoolQuery

RelBoolQuery(String[]) - Constructor for class dragon.ir.query.RelBoolQuery

RelBoolQuery(String) - Constructor for class dragon.ir.query.RelBoolQuery

relSegmentEnd - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

relSegmentStart - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

RelSimpleQuery - Class in dragon.ir.query

Simple relation Query

RelSimpleQuery() - Constructor for class dragon.ir.query.RelSimpleQuery

RelSimpleQuery(String) - Constructor for class dragon.ir.query.RelSimpleQuery

remaining() - Method in class dragon.util.FastBinaryReader

remaining() - Method in class dragon.util.FastFileInputStream

removeAll() - Method in class dragon.ir.classification.DocClass

removeAll() - Method in class dragon.ir.clustering.DocCluster

removeDoc(IRDoc) - Method in class dragon.ir.clustering.DocCluster

removeDoc(int, IRDoc) - Method in class dragon.ir.clustering.DocClusterSet

removeTag(String) - Method in class dragon.onlinedb.trec.SgmArticleParser

reset() - Method in class dragon.util.ByteArrayWriter

reset() - Method in class dragon.util.FastFileInputStream

resetBoundary(Word, Word) - Method in class dragon.nlp.Sentence

RESINK - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

restart() - Method in class dragon.onlinedb.AbstractQuery

restart() - Method in class dragon.onlinedb.ArrayCollectionReader

restart() - Method in class dragon.onlinedb.BasicCollectionReader

restart() - Method in interface dragon.onlinedb.CollectionReader

The collection reader supports forward-only read mode.

restart() - Method in class dragon.onlinedb.SimpleCollectionReader

restart() - Method in class dragon.onlinedb.trec.AbstractTopicReader

restart() - Method in class dragon.onlinedb.trec.TrecCollectionReader

restart() - Method in class dragon.onlinedb.trec.TrecFileReader

retainFeature(DataSequence, Feature) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

RetrievalEvaAppConfig - Class in dragon.config

Retrieval evaluation configuration

RetrievalEvaAppConfig() - Constructor for class dragon.config.RetrievalEvaAppConfig

ReutersArticleParser - Class in dragon.onlinedb.dm

Reuters article parser

ReutersArticleParser() - Constructor for class dragon.onlinedb.dm.ReutersArticleParser

reviewUrl - Variable in class dragon.onlinedb.amazon.AmazonReviewQuery

right - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

rightBoundary(int, int) - Method in class dragon.ml.seqmodel.feature.Window

RocchioFeedback - Class in dragon.ir.search.feedback

Rocchio Feedback

RocchioFeedback(Searcher, int, int, double) - Constructor for class dragon.ir.search.feedback.RocchioFeedback

RocchioFeedback(Searcher, int, int, double, double, double) - Constructor for class dragon.ir.search.feedback.RocchioFeedback

root - Variable in class dragon.config.ConfigUtil

ROUGE - Class in dragon.ir.summarize

A Program for Summarizaiton Evaluation

ROUGE() - Constructor for class dragon.ir.summarize.ROUGE

ROUGE_L - Static variable in class dragon.ir.summarize.ROUGE

ROUGE_N - Static variable in class dragon.ir.summarize.ROUGE

ROUGE_S - Static variable in class dragon.ir.summarize.ROUGE

ROUGE_SU - Static variable in class dragon.ir.summarize.ROUGE

ROUGE_W - Static variable in class dragon.ir.summarize.ROUGE

row - Variable in class dragon.matrix.AbstractRow

row - Variable in class dragon.matrix.DoubleCell

row - Variable in class dragon.matrix.IntCell

Row - Interface in dragon.matrix

Interface of row for sparse matrix

rowBase - Variable in class dragon.matrix.AbstractMatrix

rows - Variable in class dragon.matrix.AbstractMatrix

rows() - Method in class dragon.matrix.AbstractMatrix

rows() - Method in interface dragon.matrix.Matrix

rows() - Method in class dragon.matrix.SparseMatrixFactory

S

save(String) - Method in class dragon.ir.index.IRCollection

saveFeatures(String) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

saveFeatures(String) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Save features to a text file

saveModel(String) - Method in interface dragon.ir.classification.Classifier

Save the trained classifier model to a file which can be used to restore the classifier later.

saveModel(String) - Method in class dragon.ir.classification.NBClassifier

saveModelParameter(String) - Method in class dragon.ml.seqmodel.crf.AbstractCRF

saveModelParameter(String) - Method in interface dragon.ml.seqmodel.crf.Trainer

Saves the parameters of the CRF model to a text file

saveTextFile(String, String) - Static method in class dragon.util.FileUtil

saveTextFile(String, String, String) - Static method in class dragon.util.FileUtil

saveTo(String, boolean) - Method in class dragon.matrix.AbstractFlatSparseMatrix

saveTo(String) - Method in class dragon.matrix.AbstractFlatSparseMatrix

saveTo(String, boolean) - Method in class dragon.matrix.DoubleFlatDenseMatrix

saveTo(String) - Method in class dragon.matrix.DoubleFlatDenseMatrix

saveTo(String, boolean) - Method in class dragon.matrix.IntFlatDenseMatrix

saveTo(String) - Method in class dragon.matrix.IntFlatDenseMatrix

saveTo(String) - Method in class dragon.nlp.ontology.umls.UmlsCUIList

saveTo(String, boolean) - Method in class dragon.nlp.ontology.umls.UmlsCUIList

saveTo(String) - Method in class dragon.nlp.ontology.umls.UmlsTokenList

saveTo(String, boolean) - Method in class dragon.nlp.ontology.umls.UmlsTokenList

saveTrainingResult() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

saveTrainingResult() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

saveTrainingResult() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Saves the training results in training mode

saveTrainingResult() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

score - Variable in class dragon.matrix.DoubleCell

score - Variable in class dragon.matrix.IntCell

scores - Variable in class dragon.matrix.IntRow

screenArticleContent(boolean, boolean, boolean, boolean) - Method in class dragon.ir.index.OnlineIndexer

screenArticleContent(boolean, boolean, boolean) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

search(IRQuery) - Method in class dragon.ir.search.BoolRankSearcher

search(IRQuery) - Method in class dragon.ir.search.FeedbackSearcher

search(IRQuery) - Method in class dragon.ir.search.FullRankSearcher

search(IRQuery) - Method in class dragon.ir.search.PartialRankSearcher

search(IRQuery) - Method in class dragon.ir.search.QueryExpansionSearcher

search(IRQuery) - Method in interface dragon.ir.search.Searcher

search(String) - Method in class dragon.nlp.SimpleElementList

search(int) - Method in class dragon.nlp.SimpleElementList

search(int, int) - Method in class dragon.nlp.SimplePairList

search(String) - Method in class dragon.onlinedb.BasicArticleIndex

searcher - Variable in class dragon.ir.search.feedback.AbstractFeedback

Searcher - Interface in dragon.ir.search

Interface of Text Searcher

SearcherConfig - Class in dragon.config

Searcher configuration

SearcherConfig() - Constructor for class dragon.config.SearcherConfig

SearcherConfig(ConfigureNode) - Constructor for class dragon.config.SearcherConfig

SearcherConfig(String) - Constructor for class dragon.config.SearcherConfig

searchIn(Sentence) - Method in class dragon.nlp.Term

Search the first occurrence of the current term in the sentence

searchIn(Sentence, Word) - Method in class dragon.nlp.Term

Search the first occurrence of the current term in the sentence after the word specified

searchUrl - Variable in class dragon.onlinedb.amazon.AmazonCatalogQuery

SEC_ABSTRACT - Static variable in class dragon.ir.index.IRSection

SEC_ALL - Static variable in class dragon.ir.index.IRSection

SEC_BODY - Static variable in class dragon.ir.index.IRSection

SEC_META - Static variable in class dragon.ir.index.IRSection

SEC_TITLE - Static variable in class dragon.ir.index.IRSection

secondConceptList - Variable in class dragon.nlp.extract.AbstractDualConceptExtractor

secondUseConcept - Variable in class dragon.ir.index.DualIndexer

secondWriter - Variable in class dragon.ir.index.DualIndexer

seed - Variable in class dragon.ir.topicmodel.AbstractModel

segLen - Variable in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

selectedFeatureNum - Variable in class dragon.ir.classification.featureselection.AbstractFeatureSelector

selectedFeatureNum - Variable in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

semanticCheck_enabled - Variable in class dragon.nlp.extract.AbstractTermExtractor

semanticCheck_enabled - Variable in class dragon.nlp.extract.AbstractTripleExtractor

SemanticNBClassifier - Class in dragon.ir.classification

Naive Bayesian Classifier with Semantic Smoothing or Background Smoothing

SemanticNBClassifier(String) - Constructor for class dragon.ir.classification.SemanticNBClassifier

SemanticNBClassifier(IndexReader, double) - Constructor for class dragon.ir.classification.SemanticNBClassifier

SemanticNBClassifier(IndexReader, IndexReader, DoubleSparseMatrix, double, double) - Constructor for class dragon.ir.classification.SemanticNBClassifier

SemanticNBClassifier(IndexReader, IndexReader, KnowledgeBase, double, double) - Constructor for class dragon.ir.classification.SemanticNBClassifier

SemanticNet - Interface in dragon.nlp.ontology

Interface of Semantic Network

SemanticRankSummarizer - Class in dragon.ir.summarize

Semantic based ranking summarizer which can supports differnt semantic similarity measure such as ontology based and model based.

SemanticRankSummarizer(OnlineSentenceIndexer, KnowledgeBase) - Constructor for class dragon.ir.summarize.SemanticRankSummarizer

SemanticRankSummarizer(OnlineSentenceIndexer, OnlineSentenceIndexer, KnowledgeBase) - Constructor for class dragon.ir.summarize.SemanticRankSummarizer

sentDelimitor - Variable in class dragon.nlp.extract.EngDocumentParser

Sentence - Class in dragon.nlp

Data structure for sentence extracted from text

Sentence() - Constructor for class dragon.nlp.Sentence

sentenceBase - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

SentenceBase - Class in dragon.nlp.tool.xtract

Sentence base class provides functions of adding and saving sententce to matrix

SentenceBase(String, String) - Constructor for class dragon.nlp.tool.xtract.SentenceBase

sentMatrix - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

SequenceFileReader - Class in dragon.ir.index.sequence

The file reader for reading sequencial data from file

SequenceFileReader(String, String) - Constructor for class dragon.ir.index.sequence.SequenceFileReader

SequenceFileWriter - Class in dragon.ir.index.sequence

The file writer for writing sequencial data to file

SequenceFileWriter(String, String) - Constructor for class dragon.ir.index.sequence.SequenceFileWriter

SequenceIndexReader - Interface in dragon.ir.index.sequence

Interface of Sequence Index Reader

SequenceReader - Interface in dragon.ir.index.sequence

Interface of Sequence Reader

SequenceWriter - Interface in dragon.ir.index.sequence

Interface of sequence writer

server - Variable in class dragon.onlinedb.pubmed.PubMedQuery

set(int, int, double) - Method in class dragon.matrix.DoubleFlatSparseMatrix

set(int, double) - Method in class dragon.matrix.vector.DoubleVector

set(int, int) - Method in class dragon.matrix.vector.IntVector

set(String, String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setAbbreviationOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setAbbreviationOption(boolean) - Method in interface dragon.nlp.extract.TermExtractor

Sets the option of checking terms in abbreviation.

setAbstract(String) - Method in interface dragon.onlinedb.Article

setAbstract(String) - Method in class dragon.onlinedb.BasicArticle

setAbstract(String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setAccuracy(int) - Method in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

setAdjectivePhraseOption(boolean) - Method in class dragon.nlp.ontology.AbstractVocabulary

setAdjectivePhraseOption(boolean) - Method in class dragon.nlp.ontology.ChineseVocabulary

setAdjectivePhraseOption(boolean) - Method in interface dragon.nlp.ontology.Vocabulary

Sets the option whether adjective phrase is allowed.

setAdjectiveTermOption(boolean) - Method in class dragon.nlp.ontology.AbstractOntology

setAdjectiveTermOption(boolean) - Method in interface dragon.nlp.ontology.Ontology

Sets the option whether adjective term is allowed.

setAnnotationTypes(String[]) - Method in class dragon.nlp.tool.Annie

setAnnotationTypes(String[]) - Method in interface dragon.nlp.tool.NER

Set the entity types of interest, for example, organization, location, person, etc.

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.AbstractQuery

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.ArrayCollectionReader

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.BasicCollectionReader

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.BasicCollectionWriter

setArticleParser(ArticleParser) - Method in interface dragon.onlinedb.CollectionReader

Sets the article parse for the collection reader

setArticleParser(ArticleParser) - Method in interface dragon.onlinedb.CollectionWriter

Sets the article parser for the collection writer

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.SimpleCollectionReader

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.trec.AbstractTopicReader

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.trec.TrecCollectionReader

setArticleParser(ArticleParser) - Method in class dragon.onlinedb.trec.TrecFileReader

setAssociatedConcept(Concept) - Method in class dragon.nlp.Word

setAttributeCheckOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setAttributeCheckOption(boolean) - Method in interface dragon.nlp.extract.TermExtractor

setAuthorityVectorPrior(DoubleVector) - Method in class dragon.matrix.vector.HITS

setAutoRefresh(boolean) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

setAutoRefresh(boolean) - Method in class dragon.util.HttpUtil

setBackgroundCoefficient(double) - Method in class dragon.ir.classification.SemanticNBClassifier

setBackgroundCoefficient(double) - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

setBackgroundCoefficient(double) - Method in class dragon.ir.summarize.SemanticRankSummarizer

setBeta(double) - Method in class dragon.ir.summarize.ROUGE

setBody(String) - Method in interface dragon.onlinedb.Article

setBody(String) - Method in class dragon.onlinedb.BasicArticle

setBody(String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setByteScore(byte) - Method in interface dragon.matrix.Cell

setByteScore(byte) - Method in class dragon.matrix.DoubleCell

setByteScore(byte) - Method in class dragon.matrix.IntCell

setCache(int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

setCacheSize(int) - Method in class dragon.ir.index.BasicIRRelationIndexList

setCacheSize(int) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

setCacheSize(int) - Method in class dragon.nlp.tool.xtract.WordPairStatList

setCandidateCUI(String[]) - Method in class dragon.nlp.Term

setCandidateTUI(String[]) - Method in class dragon.nlp.Term

setCandidateTUI(String[]) - Method in class dragon.nlp.Triple

setCaseOption(boolean) - Method in class dragon.ir.summarize.ROUGE

setCategory(int) - Method in class dragon.ir.index.IRDoc

setCategory(int) - Method in interface dragon.onlinedb.Article

setCategory(int) - Method in class dragon.onlinedb.BasicArticle

setCategory(int) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setCharSet(String) - Static method in class dragon.util.EnvVariable

setClassName(String) - Method in class dragon.ir.classification.DocClass

setClassNum(int) - Method in class dragon.ir.classification.multiclass.AllPairCodeMatrix

setClassNum(int) - Method in interface dragon.ir.classification.multiclass.CodeMatrix

Sets the number of categories

setClassNum(int) - Method in class dragon.ir.classification.multiclass.OVACodeMatrix

setClauseID(int) - Method in class dragon.nlp.Word

setClauseIdentifyOption(boolean) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setClauseIdentifyOption(boolean) - Method in interface dragon.nlp.extract.TripleExtractor

Sets the option of extracting triples within a clause window.

setClusterID(int) - Method in class dragon.ir.clustering.DocCluster

setClusterName(String) - Method in class dragon.ir.clustering.DocCluster

setClusterNum(int) - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

setClusterNum(int) - Method in class dragon.ir.clustering.clustermodel.CosineClusterModel

setClusterNum(int) - Method in class dragon.ir.clustering.clustermodel.EuclideanClusterModel

setClusterNum(int) - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

setCollectionFileSize(long) - Method in class dragon.onlinedb.BasicArticleIndex

setCollectionReader(CollectionReader) - Method in class dragon.ir.index.OnlineIndexReader

setCollectionReader(CollectionReader) - Method in class dragon.ir.index.sentence.OnlineSentenceIndexReader

setCollectionReader(CollectionReader) - Method in class dragon.ir.index.sequence.OnlineSequenceIndexReader

setComparator(Comparator) - Method in class dragon.util.SortedArray

setCompoundTermPredictOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setCompoundTermPredictOption(boolean) - Method in interface dragon.nlp.extract.TermExtractor

Sets the option of predicting compound terms.

setConceptFilter(ConceptFilter) - Method in class dragon.nlp.extract.AbstractConceptExtractor

setConceptFilter(ConceptFilter) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setConceptFilter(ConceptFilter) - Method in interface dragon.nlp.extract.ConceptExtractor

Sets the concept filter for the concept extatractor

setConceptFilter(ConceptFilter) - Method in interface dragon.nlp.extract.TripleExtractor

Sets the concept filter for the concept extatractor

setConnectionTimeout(int) - Method in class dragon.util.HttpUtil

setContent(String) - Method in class dragon.ml.seqmodel.data.BasicToken

setContent(String) - Method in class dragon.nlp.Word

setContinuousScoreOpiton(boolean) - Method in class dragon.ir.summarize.LexRankSummarizer

setCoordinateOption(boolean) - Method in class dragon.nlp.ontology.AbstractOntology

setCoordinateOption(boolean) - Method in class dragon.nlp.ontology.AbstractVocabulary

setCoordinateOption(boolean) - Method in class dragon.nlp.ontology.ChineseVocabulary

setCoordinateOption(boolean) - Method in interface dragon.nlp.ontology.Ontology

Sets the option whether a term can contain a conjunction.

setCoordinateOption(boolean) - Method in interface dragon.nlp.ontology.Vocabulary

Sets the option whether a phrase can contain a conjunction.

setCoordinatingCheckOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setCoordinatingCheckOption(boolean) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setCoordinatingCheckOption(boolean) - Method in interface dragon.nlp.extract.TermExtractor

Set the option of checking the coordinating terms

setCoordinatingCheckOption(boolean) - Method in interface dragon.nlp.extract.TripleExtractor

setCoordinatingTermPredictOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setCoordinatingTermPredictOption(boolean) - Method in interface dragon.nlp.extract.TermExtractor

Sets the option of predicting terms according to coordinating relationship.

setCoReferenceOption(boolean) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setCoReferenceOption(boolean) - Method in interface dragon.nlp.extract.TripleExtractor

setCount(int) - Method in class dragon.nlp.Counter

setCUI(String) - Method in class dragon.nlp.Term

setDate(Date) - Method in interface dragon.onlinedb.Article

setDate(Date) - Method in class dragon.onlinedb.BasicArticle

setDate(Date) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setDateRange(String, String) - Method in class dragon.onlinedb.pubmed.PubMedQuery

setDefaultEncoding(String) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

setDescendantNum(int) - Method in class dragon.nlp.ontology.mesh.MeshNode

setDoc(String) - Method in class dragon.ir.index.AbstractIndexer

setDoc(String) - Method in class dragon.ir.index.AbstractIndexWriteController

setDoc(String) - Method in class dragon.ir.index.BasicIndexer

setDoc(String) - Method in class dragon.ir.index.OnlineIndexer

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.AbsoluteDiscountSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.DirichletSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.DocTransMixtureWeightEM

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.JMSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.OkapiSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.PivotedNormSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

setDoc(IRDoc) - Method in interface dragon.ir.search.smooth.Smoother

Set the current document for processing

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.TFIDFSmoother

setDoc(IRDoc) - Method in class dragon.ir.search.smooth.TwoStageSmoother

setDocCluster(DocCluster) - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

Iterative partional approaches (e.g.

setDocCluster(DocCluster) - Method in class dragon.ir.clustering.clustermodel.CosineClusterModel

setDocCluster(DocCluster) - Method in class dragon.ir.clustering.clustermodel.EuclideanClusterModel

setDocCluster(DocCluster) - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

setDocCluster(DocCluster, int) - Method in class dragon.ir.clustering.DocClusterSet

setDocClusters(DocClusterSet) - Method in class dragon.ir.clustering.clustermodel.AbstractClusterModel

setDocClusters(DocClusterSet) - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

This method is equal to calling the setDocCluster method for all clusters.

setDocFrequency(int) - Method in class dragon.ir.index.IRRelation

setDocFrequency(int) - Method in interface dragon.ir.index.IRSignature

setDocFrequency(int) - Method in class dragon.ir.index.IRTerm

setDocFrequency(int) - Method in class dragon.ir.query.SimpleTermPredicate

setDocNum(int) - Method in class dragon.ir.index.IRCollection

setDocumentParser(DocumentParser) - Method in class dragon.nlp.extract.AbstractConceptExtractor

setDocumentParser(DocumentParser) - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

setDocumentParser(DocumentParser) - Method in interface dragon.nlp.extract.ConceptExtractor

Sets the document parser for the concept extractor.

setDocumentParser(DocumentParser) - Method in interface dragon.nlp.extract.DualConceptExtractor

Sets the document parser for the concept extractor.

setDocumentParser(DocumentParser) - Method in class dragon.nlp.tool.xtract.EngWordPairIndexer

setDocumentParser(DocumentParser) - Method in interface dragon.nlp.tool.xtract.WordPairIndexer

setDominantVectorThreshold(double) - Method in class dragon.ir.search.expand.InformationFlowQE

setDominantVectorThreshold(double) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setDominantVectorWeight(double) - Method in class dragon.ir.search.expand.InformationFlowQE

setDominantVectorWeight(double) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setDouble(int, int, double) - Method in class dragon.matrix.AbstractFlatSparseMatrix

setDouble(int, int, double) - Method in interface dragon.matrix.DoubleDenseMatrix

setDouble(int, int, double) - Method in class dragon.matrix.DoubleFlatDenseMatrix

setDoubleScore(double) - Method in interface dragon.matrix.Cell

setDoubleScore(double) - Method in class dragon.matrix.DoubleCell

setDoubleScore(double) - Method in class dragon.matrix.IntCell

setDragonHome(String) - Static method in class dragon.util.EnvVariable

setEMBackgroundCoefficient(double) - Method in class dragon.ir.kngbase.TopicSignatureModel

setEMIterationNum(int) - Method in class dragon.ir.kngbase.TopicSignatureModel

setEnd(int) - Method in class dragon.ml.seqmodel.model.Edge

setExpired(boolean) - Method in class dragon.nlp.Term

setFeatureFilter(FeatureFilter) - Method in class dragon.ir.clustering.AbstractClustering

setFeatureFilter(FeatureFilter) - Method in interface dragon.ir.clustering.Clustering

setFeatureFilter(FeatureFilter) - Method in class dragon.ir.clustering.clustermodel.AbstractClusterModel

setFeatureFilter(FeatureFilter) - Method in interface dragon.ir.clustering.clustermodel.ClusterModel

A feature selector is set.

setFeatureFilter(FeatureFilter) - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

setFeatureFilter(FeatureFilter) - Method in class dragon.ir.clustering.docdistance.AbstractDocDistance

setFeatureFilter(FeatureFilter) - Method in interface dragon.ir.clustering.docdistance.DocDistance

A feature selector is set.

setFeatureSelector(FeatureSelector) - Method in class dragon.ir.classification.AbstractClassifier

setFeatureSelector(FeatureSelector) - Method in interface dragon.ir.classification.Classifier

setFeedbackDocNum(int) - Method in class dragon.ir.search.feedback.AbstractFeedback

setFeedbackDocNum(int) - Method in interface dragon.ir.search.feedback.Feedback

setFileIndex(int) - Method in class dragon.onlinedb.BasicArticleKey

setFilteringOption(boolean) - Method in class dragon.nlp.extract.AbstractConceptExtractor

setFilteringOption(boolean) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setFilteringOption(boolean) - Method in interface dragon.nlp.extract.ConceptExtractor

Sets the option of concept filtering

setFilteringOption(boolean) - Method in interface dragon.nlp.extract.TripleExtractor

Sets the option of concept filtering

setFirstTerm(int) - Method in class dragon.ir.index.IRRelation

setFirstWord(int) - Method in class dragon.nlp.tool.xtract.WordPairStat

setFlushInterval(int) - Method in class dragon.matrix.AbstractGiantSparseMatrix

setFlushInterval(int) - Method in class dragon.matrix.AbstractSuperSparseMatrix

setFrequency(int) - Method in class dragon.ir.index.IRRelation

setFrequency(int) - Method in interface dragon.ir.index.IRSignature

setFrequency(int) - Method in class dragon.ir.index.IRTerm

setFrequency(int) - Method in class dragon.ir.query.SimpleTermPredicate

setFrequency(int) - Method in interface dragon.nlp.compare.FrequencySortable

setFrequency(int) - Method in interface dragon.nlp.Concept

setFrequency(int) - Method in class dragon.nlp.ontology.mesh.MeshNode

setFrequency(int) - Method in class dragon.nlp.Phrase

setFrequency(int) - Method in class dragon.nlp.Term

setFrequency(int) - Method in class dragon.nlp.Token

setFrequency(int) - Method in class dragon.nlp.Triple

setFrequency(int) - Method in class dragon.nlp.Word

setGradientHistory(int) - Method in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

setHALSpace(HALSpace) - Method in class dragon.ir.search.expand.InformationFlowQE

setHALWindowSize(int) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setHashCapacity(int) - Static method in class dragon.nlp.SimplePair

setHost(String) - Method in class dragon.util.HttpUtil

setHost(String, String) - Method in class dragon.util.HttpUtil

setHost(String, int) - Method in class dragon.util.HttpUtil

setHost(String, int, String) - Method in class dragon.util.HttpUtil

setHubVectorPrior(DoubleVector) - Method in class dragon.matrix.vector.HITS

setID(FeatureIdentifier) - Method in class dragon.ml.seqmodel.feature.BasicFeature

setID(FeatureIdentifier) - Method in interface dragon.ml.seqmodel.feature.Feature

Sets the identitifer

setId(int) - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

setIgnore(boolean) - Method in class dragon.nlp.Word

setIndex(int) - Method in class dragon.ir.index.IRDoc

setIndex(int) - Method in class dragon.ir.index.IRRelation

setIndex(int) - Method in interface dragon.ir.index.IRSignature

setIndex(int) - Method in class dragon.ir.index.IRTerm

setIndex(int) - Method in class dragon.ir.query.SimpleTermPredicate

setIndex(int) - Method in class dragon.ir.summarize.TextUnit

setIndex(int) - Method in class dragon.ml.seqmodel.data.BasicToken

setIndex(int) - Method in class dragon.ml.seqmodel.feature.BasicFeature

setIndex(int) - Method in interface dragon.ml.seqmodel.feature.Feature

Sets the index of the feature

setIndex(int) - Method in interface dragon.nlp.compare.IndexSortable

setIndex(int) - Method in interface dragon.nlp.Concept

setIndex(int) - Method in class dragon.nlp.Document

setIndex(int) - Method in class dragon.nlp.ontology.umls.UmlsCUI

setIndex(int) - Method in class dragon.nlp.Paragraph

setIndex(int) - Method in class dragon.nlp.Phrase

setIndex(int) - Method in class dragon.nlp.Sentence

setIndex(int) - Method in class dragon.nlp.SimpleElement

setIndex(int) - Method in class dragon.nlp.SimplePair

setIndex(int) - Method in class dragon.nlp.Term

setIndex(int) - Method in class dragon.nlp.Token

setIndex(int) - Method in class dragon.nlp.tool.xtract.WordPairStat

setIndex(int) - Method in class dragon.nlp.Triple

setIndex(int) - Method in class dragon.nlp.Word

setIndexLookupOption(boolean) - Method in class dragon.nlp.tool.lemmatiser.SuffixDetachOperation

setIndexLookupOption(boolean) - Method in class dragon.nlp.tool.lemmatiser.SuffixEDetachOperation

setIndexReader(IndexReader) - Method in class dragon.ir.index.IRSection

setIndexWriter(IndexWriter) - Method in class dragon.ir.index.IRSection

setInfrequentTermThreshold(int) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setInitialParameters(double[], IRDoc[]) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

setInitialParameters(double[], IRDoc[]) - Method in class dragon.ir.search.smooth.DocTransMixtureWeightEM

setInt(int, int, int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

setInt(int, int, int) - Method in interface dragon.matrix.IntDenseMatrix

setInt(int, int, int) - Method in class dragon.matrix.IntFlatDenseMatrix

setIntScore(int) - Method in interface dragon.matrix.Cell

setIntScore(int) - Method in class dragon.matrix.DoubleCell

setIntScore(int) - Method in class dragon.matrix.IntCell

setInvSigmaSquare(int) - Method in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

setIRDocKeyList(SimpleElementList) - Method in class dragon.ir.index.AbstractIndexReader

setIRTermKeyList(SimpleElementList) - Method in class dragon.ir.index.AbstractIndexReader

setIterationNum(int) - Method in class dragon.ir.topicmodel.AbstractModel

setKey(String) - Method in class dragon.ir.index.IRDoc

setKey(String) - Method in class dragon.ir.index.IRTerm

setKey(String) - Method in class dragon.nlp.SimpleElement

setKey(String) - Method in interface dragon.onlinedb.Article

setKey(String) - Method in class dragon.onlinedb.BasicArticle

setKey(String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setLabel(int, int) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

setLabel(int) - Method in class dragon.ml.seqmodel.data.BasicToken

setLabel(int, int) - Method in interface dragon.ml.seqmodel.data.DataSequence

Sets the label to the token in the given position.

setLabel(int) - Method in class dragon.ml.seqmodel.feature.BasicFeature

setLabel(int) - Method in interface dragon.ml.seqmodel.feature.Feature

Sets the label of the current feature

setLemma(String) - Method in class dragon.nlp.Word

setLemmaOption(boolean) - Method in class dragon.nlp.ontology.AbstractOntology

setLemmaOption(boolean) - Method in class dragon.nlp.ontology.AbstractVocabulary

setLemmaOption(boolean) - Method in class dragon.nlp.ontology.ChineseVocabulary

setLemmaOption(boolean) - Method in interface dragon.nlp.ontology.Ontology

Sets the option of using the base form of the word when matching a term.

setLemmaOption(boolean) - Method in interface dragon.nlp.ontology.Vocabulary

Sets the option of using the base form of the word when matching a phrase.

setLemmatiser(Lemmatiser) - Method in class dragon.ir.summarize.ROUGE

setLemmatiser(Lemmatiser) - Method in class dragon.nlp.extract.AbstractPhraseExtractor

setLemmatiser(Lemmatiser) - Method in class dragon.nlp.extract.AbstractTermExtractor

setLemmatiser(Lemmatiser) - Method in class dragon.nlp.extract.AbstractTokenExtractor

setLemmatiser(Lemmatiser) - Method in interface dragon.nlp.extract.ConceptExtractor

Sets lemmatiser for this extractor.

setLemmatiserOption(boolean) - Method in class dragon.ir.summarize.ROUGE

setLength(int) - Method in interface dragon.onlinedb.Article

setLength(int) - Method in class dragon.onlinedb.BasicArticle

setLength(int) - Method in class dragon.onlinedb.BasicArticleKey

setLength(int) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setLoadFactor(float) - Method in class dragon.matrix.AbstractRow

setLoadFactor(float) - Method in interface dragon.matrix.Row

Some implementations of sparse matrix cache rows in memory.

setLog(String) - Method in class dragon.ir.index.AbstractIndexer

setLog(String) - Method in class dragon.ir.index.DualIndexer

setLog(String) - Method in interface dragon.ir.index.Indexer

setLog(String) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

setLog(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

setLogLikelihoodOption(boolean) - Method in class dragon.ir.search.smooth.AbstractSmoother

setLogLikelihoodOption(boolean) - Method in interface dragon.ir.search.smooth.Smoother

If this option is true, smoomther will return a log score

setLongScore(long) - Method in interface dragon.matrix.Cell

setLongScore(long) - Method in class dragon.matrix.DoubleCell

setLongScore(long) - Method in class dragon.matrix.IntCell

setMaxDocFrequency(int) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

setMaxIteration(int) - Method in class dragon.ir.clustering.BasicKMean

setMaxIteration(int) - Method in class dragon.ir.clustering.BisectKMean

setMaxIteration(int) - Method in class dragon.ir.clustering.LinkKMean

setMaxIteration(int) - Method in class dragon.matrix.vector.PowerMethod

setMaxIteration(int) - Method in class dragon.ml.seqmodel.crf.AbstractTrainer

setMaxIteration(int) - Method in interface dragon.ml.seqmodel.crf.Trainer

Sets the number of maximum iterations

setMaxKLDivDistance(double) - Method in class dragon.ir.summarize.SemanticRankSummarizer

setMaxSkippedWords(int) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

setMaxSpan(int) - Method in class dragon.nlp.tool.xtract.EngWordPairGenerator

setMaxSpan(int) - Method in interface dragon.nlp.tool.xtract.WordPairGenerator

setMemo(Object) - Method in interface dragon.nlp.Concept

setMemo(Object) - Method in class dragon.nlp.Phrase

setMemo(Object) - Method in class dragon.nlp.Term

setMemo(Object) - Method in class dragon.nlp.Token

setMemo(Object) - Method in class dragon.nlp.Triple

setMessageOption(boolean) - Method in class dragon.ir.kngbase.DocRepresentation

setMessageOption(boolean) - Method in class dragon.matrix.vector.HITS

setMessageOption(boolean) - Method in class dragon.matrix.vector.PowerMethod

setMeta(String) - Method in interface dragon.onlinedb.Article

setMeta(String) - Method in class dragon.onlinedb.BasicArticle

setMeta(String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setMinArticleSize(int) - Method in class dragon.ir.index.BasicIndexer

setMinArticleSize(int) - Method in class dragon.ir.index.OnlineIndexer

setMinDocFrequency(int) - Method in class dragon.ir.kngbase.CooccurrenceGenerator

setMinScore(double) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

setMinSelectivity(double) - Method in class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

setMinSentenceLength(int) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

setMultipleReferenceMode(int) - Method in class dragon.ir.summarize.ROUGE

setMultiplier(double) - Method in class dragon.ir.search.expand.InformationFlowQE

setMultiplier(double) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setName(String) - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

setName(String) - Method in class dragon.nlp.ontology.mesh.MeshNode

setName(String) - Method in class dragon.nlp.ontology.umls.UmlsCUI

setNameMode(int) - Static method in class dragon.nlp.Phrase

setNameMode(int) - Static method in class dragon.nlp.Term

setNonBoundaryPunctuation(String) - Method in class dragon.nlp.ontology.AbstractOntology

setNonBoundaryPunctuation(String) - Method in class dragon.nlp.ontology.AbstractVocabulary

setNonZeroDoubleScore(int, double) - Method in class dragon.matrix.DoubleRow

setNonZeroDoubleScoreInRow(int, int, double) - Method in class dragon.matrix.AbstractFlatSparseMatrix

setNonZeroIntScore(int, int) - Method in class dragon.matrix.IntRow

setNonZeroIntScoreInRow(int, int, int) - Method in class dragon.matrix.AbstractFlatSparseMatrix

setNormalizedString(String) - Method in class dragon.nlp.Term

setNPPOption(boolean) - Method in class dragon.nlp.ontology.AbstractOntology

setNPPOption(boolean) - Method in class dragon.nlp.ontology.AbstractVocabulary

setNPPOption(boolean) - Method in class dragon.nlp.ontology.ChineseVocabulary

setNPPOption(boolean) - Method in interface dragon.nlp.ontology.Ontology

Sets the option whether NPP term is allowed.

setNPPOption(boolean) - Method in interface dragon.nlp.ontology.Vocabulary

Sets the option whether NPP phrase is allowed.

setOffset(int) - Method in class dragon.nlp.Word

setOffset(long) - Method in class dragon.onlinedb.BasicArticleKey

setParallelGroup(int) - Method in class dragon.nlp.Word

setParameters(double[]) - Method in class dragon.ir.search.smooth.AbsoluteDiscountSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.DirichletSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.JMSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.OkapiSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.PivotedNormSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

setParameters(double[]) - Method in interface dragon.ir.search.smooth.Smoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.TFIDFSmoother

setParameters(double[]) - Method in class dragon.ir.search.smooth.TwoStageSmoother

setParent(Dataset) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

setParent(Dataset) - Method in interface dragon.ml.seqmodel.data.DataSequence

Sets the dataset object which the current data sequence belongs to

setParent(Document) - Method in class dragon.nlp.Paragraph

setParent(Paragraph) - Method in class dragon.nlp.Sentence

setParent(Sentence) - Method in class dragon.nlp.Word

setPath(String) - Method in class dragon.nlp.ontology.mesh.MeshNode

setPOS(String, int) - Method in class dragon.nlp.Word

setPosInSentence(int) - Method in class dragon.nlp.Word

setPOSTag(int) - Method in class dragon.ml.seqmodel.data.POSToken

setPredictedTerm(boolean) - Method in class dragon.nlp.Term

setPrevLabel(int) - Method in class dragon.ml.seqmodel.feature.BasicFeature

setPrevLabel(int) - Method in interface dragon.ml.seqmodel.feature.Feature

Sets the label of the starting state of an edge feature if the current feature is an edge feature.

setProbThreshold(double) - Method in class dragon.ir.kngbase.TopicSignatureModel

setPunctuation(char) - Method in class dragon.nlp.Sentence

setQueryKey(int) - Method in class dragon.ir.query.AbstractIRQuery

setQueryKey(int) - Method in interface dragon.ir.query.IRQuery

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.AbsoluteDiscountSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.DirichletSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.DocTransMixtureWeightEM

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.JMSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.OkapiSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.PivotedNormSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

setQueryTerm(SimpleTermPredicate) - Method in interface dragon.ir.search.smooth.Smoother

Set the current query term for processing

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.TFIDFSmoother

setQueryTerm(SimpleTermPredicate) - Method in class dragon.ir.search.smooth.TwoStageSmoother

setQueryWeightingOption(boolean) - Method in class dragon.ir.search.AbstractSearcher

setQueryWeightingOption(boolean) - Method in interface dragon.ir.search.Searcher

If the weighting option is set to false, the searcher ignores the weight of searching terms.

setQuick(int, int, double) - Method in class dragon.matrix.DoubleFlatSparseMatrix

setRandomSeed(long) - Method in class dragon.ir.clustering.AbstractClustering

setRandomSeed(long) - Method in interface dragon.ir.clustering.Clustering

setRandomSeed(int) - Method in class dragon.ir.topicmodel.AbstractModel

setReferral(Term) - Method in class dragon.nlp.Term

setRefine(boolean) - Method in class dragon.ir.clustering.BisectKMean

setRelationCheckOption(boolean) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setRelationCheckOption(boolean) - Method in interface dragon.nlp.extract.TripleExtractor

Sets the option of checking the existance of the relationship between two semantic types.

setRelationCount(long) - Method in class dragon.ir.index.IRCollection

setRelationCount(int) - Method in class dragon.ir.index.IRDoc

setRelationNum(int) - Method in class dragon.ir.index.IRCollection

setRelationNum(int) - Method in class dragon.ir.index.IRDoc

setRemoveTagOption(boolean) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

setResetOption(boolean) - Method in class dragon.matrix.AbstractCell

setResetOption(boolean) - Method in interface dragon.matrix.Cell

If the reset option is true, the merge method replaces the cell score with the new score, otherwise adds the new score to the existing score.

setRoleInClause(int) - Method in class dragon.nlp.Word

setRoleInDocument(int) - Method in class dragon.nlp.Paragraph

setScalingOption(boolean) - Method in class dragon.ml.seqmodel.crf.AbstractTrainer

setScalingOption(boolean) - Method in interface dragon.ml.seqmodel.crf.Trainer

Sets the scaling option

setScore(double) - Method in class dragon.matrix.IntCell

setSearcher(Searcher) - Method in class dragon.ir.search.feedback.AbstractFeedback

setSearcher(Searcher) - Method in interface dragon.ir.search.feedback.Feedback

setSearchTerm(String) - Method in class dragon.onlinedb.amazon.AmazonCatalogQuery

setSearchTerm(String) - Method in class dragon.onlinedb.amazon.AmazonReviewQuery

setSearchTerm(String) - Method in interface dragon.onlinedb.ArticleQuery

Set the searching terms.

setSearchTerm(String) - Method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

setSearchTerm(String) - Method in class dragon.onlinedb.pubmed.PubMedQuery

setSearchTerm(String) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

setSearchTerm(String) - Method in class dragon.onlinedb.searchengine.GoogleEngine

setSecondTerm(int) - Method in class dragon.ir.index.IRRelation

setSecondWord(int) - Method in class dragon.nlp.tool.xtract.WordPairStat

setSectionIndexOption(boolean, boolean, boolean, boolean, boolean) - Method in class dragon.ir.index.BasicIndexer

setSectionIndexOption(boolean, boolean, boolean, boolean) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

setSegment(int, int, int) - Method in class dragon.ml.seqmodel.data.BasicDataSequence

setSegment(int, int, int) - Method in interface dragon.ml.seqmodel.data.DataSequence

Marks the bondary of the segment and sets the given label to all tokens of the segment.

setSegmentMarker(boolean) - Method in class dragon.ml.seqmodel.data.BasicToken

setSelectedFeatures(int[]) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

setSelectedFeatures(int[]) - Method in interface dragon.ir.classification.featureselection.FeatureSelector

Manually set selected features.

setSelectedFeatures(int[]) - Method in class dragon.ir.clustering.featurefilter.AbstractFeatureFilter

setSemanticCheckOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setSemanticCheckOption(boolean) - Method in class dragon.nlp.extract.AbstractTripleExtractor

setSemanticCheckOption(boolean) - Method in interface dragon.nlp.extract.TermExtractor

Sets the option of checking the semantic type of the extracted term

setSemanticCheckOption(boolean) - Method in interface dragon.nlp.extract.TripleExtractor

Sets the option of checking the semantic type of the relationship

setSenseDisambiguationOption(boolean) - Method in class dragon.nlp.ontology.AbstractOntology

setSenseDisambiguationOption(boolean) - Method in interface dragon.nlp.ontology.Ontology

Sets the option disambiguating the sense of extracted terms.

setShowProgress(boolean) - Method in class dragon.ir.clustering.AbstractClustering

setShowProgress(boolean) - Method in class dragon.ir.kngbase.HALSpace

setSimilarityThreshold(double) - Method in class dragon.ir.summarize.LexRankSummarizer

setSingleAdjectiveOption(boolean) - Method in class dragon.nlp.extract.AbstractPhraseExtractor

setSingleAdjectiveOption(boolean) - Method in interface dragon.nlp.extract.PhraseExtractor

Sets the option of extracting single-word adjectives.

setSingleNounOption(boolean) - Method in class dragon.nlp.extract.AbstractPhraseExtractor

setSingleNounOption(boolean) - Method in interface dragon.nlp.extract.PhraseExtractor

Sets the option of extracting single-word nouns.

setSingleVerbOption(boolean) - Method in class dragon.nlp.extract.AbstractPhraseExtractor

setSingleVerbOption(boolean) - Method in interface dragon.nlp.extract.PhraseExtractor

Sets the option of extracting single-word verbs.

setSiteRestriction(String) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

setSocketTimeout(int) - Method in class dragon.util.HttpUtil

setStart(int) - Method in class dragon.ml.seqmodel.model.Edge

setState(int) - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

setStatusOut(PrintWriter) - Method in class dragon.ir.search.smooth.AbstractMixtureWeightEM

setStatusOut(PrintWriter) - Method in class dragon.ir.topicmodel.AbstractModel

setStopwordFile(String) - Method in class dragon.ir.summarize.ROUGE

setStopwordOption(boolean) - Method in class dragon.ir.summarize.ROUGE

setSubConcept(boolean) - Method in class dragon.nlp.Phrase

setSubConcept(boolean) - Method in class dragon.nlp.Term

setSubConceptOption(boolean) - Method in class dragon.nlp.extract.AbstractConceptExtractor

setSubConceptOption(boolean) - Method in class dragon.nlp.extract.AbstractTermExtractor

setSubConceptOption(boolean) - Method in interface dragon.nlp.extract.ConceptExtractor

setSubject(Word, Word) - Method in class dragon.nlp.Sentence

setSubordinateVectorThreshold(double) - Method in class dragon.ir.search.expand.InformationFlowQE

setSubordinateVectorThreshold(double) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setSubordinateVectorWeight(double) - Method in class dragon.ir.search.expand.InformationFlowQE

setSubordinateVectorWeight(double) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

setSubTermOption(boolean) - Method in class dragon.nlp.extract.CompoundTermFinder

setSubTermWeight(double) - Method in class dragon.ir.query.QueryWriter

setSummary(String) - Method in class dragon.onlinedb.searchengine.WebLink

setSummaryOnlyOption(boolean) - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

setTermCount(long) - Method in class dragon.ir.index.IRCollection

setTermCount(int) - Method in class dragon.ir.index.IRDoc

setTermNum(int) - Method in class dragon.ir.index.IRCollection

setTermNum(int) - Method in class dragon.ir.index.IRDoc

setText(String) - Method in class dragon.ir.summarize.TextUnit

setTitle(String) - Method in interface dragon.onlinedb.Article

setTitle(String) - Method in class dragon.onlinedb.BasicArticle

setTitle(String) - Method in class dragon.onlinedb.bibtex.BibTeXArticle

setTitle(String) - Method in class dragon.onlinedb.searchengine.WebLink

setTranslationCoefficient(double) - Method in class dragon.ir.classification.SemanticNBClassifier

setTranslationCoefficient(double) - Method in class dragon.ir.clustering.clustermodel.MultinomialClusterModel

setTranslationCoefficient(double) - Method in class dragon.ir.summarize.SemanticRankSummarizer

setTranslationMatrix(DoubleSparseMatrix) - Method in class dragon.ir.search.smooth.DocFirstTransSmoother

setTranslationMatrix(DoubleSparseMatrix) - Method in class dragon.ir.search.smooth.QueryFirstTransSmoother

setTranspose(Matrix) - Method in class dragon.matrix.AbstractMatrix

setTranspose(Matrix) - Method in interface dragon.matrix.Matrix

Manually set the transposed matrix.

setTUI(String) - Method in class dragon.nlp.Term

setTUI(String) - Method in class dragon.nlp.Triple

setType(int) - Method in class dragon.nlp.Word

setTypeID(int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

setTypeID(int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

setTypeID(int) - Method in interface dragon.ml.seqmodel.feature.FeatureType

Sets the id of the current feature type

setUnlabeledData(IndexReader, DocClass) - Method in class dragon.ir.classification.NigamActiveLearning

setUnlabeledData(DocClass) - Method in class dragon.ir.classification.NigamActiveLearning

setUseAllObjectForInitialization(boolean) - Method in class dragon.ir.clustering.BasicKMean

If this option is true, the algorithm randomly assign all objects to the given number of clusters during initialization.

setUseAllObjectForInitialization(boolean) - Method in class dragon.ir.clustering.BisectKMean

If this option is true, the algorithm randomly assign all objects to the given number of clusters during initialization.

setUseDocFrequency(boolean) - Method in class dragon.ir.kngbase.TopicSignatureModel

setUseEM(boolean) - Method in class dragon.ir.kngbase.TopicSignatureModel

setUseMeanTrim(boolean) - Method in class dragon.ir.kngbase.TopicSignatureModel

setUseWeight(boolean) - Method in class dragon.ir.clustering.LinkKMean

setValue(double) - Method in class dragon.ml.seqmodel.feature.BasicFeature

setValue(double) - Method in interface dragon.ml.seqmodel.feature.Feature

Sets the value to the feature

setValue(String) - Method in class dragon.nlp.Token

setWeight(double) - Method in class dragon.ir.index.IRDoc

setWeight(double) - Method in class dragon.ir.index.IRSection

setWeight(double) - Method in class dragon.ir.query.AbstractPredicate

setWeight(double) - Method in interface dragon.ir.query.Predicate

setWeight(double) - Method in class dragon.ir.summarize.TextUnit

setWeight(double) - Method in interface dragon.nlp.compare.WeightSortable

setWeight(double) - Method in interface dragon.nlp.Concept

setWeight(double) - Method in class dragon.nlp.ontology.mesh.MeshNode

setWeight(double) - Method in class dragon.nlp.Phrase

setWeight(double) - Method in class dragon.nlp.Term

setWeight(double) - Method in class dragon.nlp.Token

setWeight(double) - Method in class dragon.nlp.Triple

SgmArticleParser - Class in dragon.onlinedb.trec

sgm-styled news article parser

SgmArticleParser() - Constructor for class dragon.onlinedb.trec.SgmArticleParser

showProgress - Variable in class dragon.ir.clustering.AbstractClustering

SimilarityMetric - Interface in dragon.nlp.ontology

Interface of Similarity Metrics

SimpleArticleParser - Class in dragon.onlinedb

Simple article parser which simply treats the content of a file as the body of an article

SimpleArticleParser() - Constructor for class dragon.onlinedb.SimpleArticleParser

SimpleCollectionReader - Class in dragon.onlinedb

A light collection reader

SimpleCollectionReader(String) - Constructor for class dragon.onlinedb.SimpleCollectionReader

SimpleCollectionReader(String, ArticleParser) - Constructor for class dragon.onlinedb.SimpleCollectionReader

SimpleCollectionReader(ArticleParser) - Constructor for class dragon.onlinedb.SimpleCollectionReader

SimpleDictionary - Class in dragon.util

Simple Word Dictionary

SimpleDictionary() - Constructor for class dragon.util.SimpleDictionary

SimpleDictionary(boolean) - Constructor for class dragon.util.SimpleDictionary

SimpleDictionary(String) - Constructor for class dragon.util.SimpleDictionary

SimpleDictionary(String, boolean) - Constructor for class dragon.util.SimpleDictionary

SimpleElement - Class in dragon.nlp

This is a light data structor for data element that can be used for simple pair

SimpleElement(String, int) - Constructor for class dragon.nlp.SimpleElement

SimpleElementList - Class in dragon.nlp

The list data structure for simple element data

SimpleElementList() - Constructor for class dragon.nlp.SimpleElementList

SimpleElementList(String, boolean) - Constructor for class dragon.nlp.SimpleElementList

SimpleExpression - Class in dragon.ir.query

Simple expression

SimpleExpression(String, Operator, Object) - Constructor for class dragon.ir.query.SimpleExpression

SimpleExpression(String[]) - Constructor for class dragon.ir.query.SimpleExpression

SimpleMixtureModel - Class in dragon.ir.topicmodel

Simple mixture model

SimpleMixtureModel(IndexReader, double) - Constructor for class dragon.ir.topicmodel.SimpleMixtureModel

SimpleMixtureModel(IndexReader, DoubleVector, double) - Constructor for class dragon.ir.topicmodel.SimpleMixtureModel

SimplePair - Class in dragon.nlp

This is a light data structure for pair data

SimplePair(int, int, int) - Constructor for class dragon.nlp.SimplePair

SimplePairList - Class in dragon.nlp

Simple pair list is the list for pair data elements

SimplePairList() - Constructor for class dragon.nlp.SimplePairList

SimplePairList(String, boolean) - Constructor for class dragon.nlp.SimplePairList

SimpleRelationPredicate - Class in dragon.ir.query

Simple relation predicate

SimpleRelationPredicate(String[]) - Constructor for class dragon.ir.query.SimpleRelationPredicate

SimpleTermPredicate - Class in dragon.ir.query

Simple term predicate

SimpleTermPredicate(String[]) - Constructor for class dragon.ir.query.SimpleTermPredicate

SimpleTermPredicate(SimpleExpression) - Constructor for class dragon.ir.query.SimpleTermPredicate

SimpleXtract - Class in dragon.nlp.tool.xtract

Simple Xtractor for extracting phrases from text

SimpleXtract(int, String) - Constructor for class dragon.nlp.tool.xtract.SimpleXtract

SINGLE_LINKAGE - Static variable in class dragon.ir.clustering.HierClustering

site - Variable in class dragon.onlinedb.searchengine.AbstractSearchEngine

size() - Method in class dragon.ir.index.AbstractIndexWriteController

size() - Method in class dragon.ir.index.AbstractIndexWriter

size() - Method in class dragon.ir.index.BasicIRDocIndexList

size() - Method in class dragon.ir.index.BasicIRRelationIndexList

size() - Method in class dragon.ir.index.BasicIRTermIndexList

size() - Method in interface dragon.ir.index.IndexWriter

size() - Method in interface dragon.ir.index.IRDocIndexList

Gets the number of documents in the list.

size() - Method in interface dragon.ir.index.IRRelationIndexList

Gets the number of relations in the list.

size() - Method in interface dragon.ir.index.IRSignatureIndexList

size() - Method in interface dragon.ir.index.IRTermIndexList

Gets the number of terms in the list

size() - Method in class dragon.ir.index.OnlineIRDocIndexList

size() - Method in class dragon.ir.index.OnlineIRRelationIndexList

size() - Method in class dragon.ir.index.OnlineIRTermIndexList

size() - Method in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

size() - Method in class dragon.ir.summarize.TopicSummary

size() - Method in class dragon.matrix.vector.DoubleVector

size() - Method in class dragon.matrix.vector.IntVector

size() - Method in class dragon.ml.seqmodel.data.BasicDataset

size() - Method in interface dragon.ml.seqmodel.data.Dataset

Gets the number of sequences in the dataset

size() - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

size() - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

size() - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

size() - Method in class dragon.nlp.SimpleElementList

size() - Method in class dragon.nlp.SimplePairList

size() - Method in class dragon.nlp.tool.xtract.WordPairStatList

size() - Method in class dragon.onlinedb.AbstractQuery

size() - Method in class dragon.onlinedb.ArrayCollectionReader

size() - Method in class dragon.onlinedb.BasicCollectionReader

size() - Method in interface dragon.onlinedb.CollectionReader

The size of the collection.

size() - Method in class dragon.onlinedb.SimpleCollectionReader

size() - Method in class dragon.onlinedb.trec.AbstractTopicReader

size() - Method in class dragon.onlinedb.trec.TrecCollectionReader

size() - Method in class dragon.onlinedb.trec.TrecFileReader

size() - Method in class dragon.util.ByteArrayWriter

skip(long) - Method in class dragon.util.FastFileInputStream

sleepManySeconds(long) - Static method in class dragon.onlinedb.searchengine.AbstractSearchEngine

sleepOneSecond() - Static method in class dragon.onlinedb.searchengine.AbstractSearchEngine

SMALL_QUANTITY - Static variable in class dragon.matrix.factorize.AbstractFactorization

smoother - Variable in class dragon.ir.search.AbstractSearcher

Smoother - Interface in dragon.ir.search.smooth

Interface of smoother which returns a score of a searching term in the given document to the searcher

SmootherConfig - Class in dragon.config

Semantic smoothing configuration

SmootherConfig() - Constructor for class dragon.config.SmootherConfig

SmootherConfig(ConfigureNode) - Constructor for class dragon.config.SmootherConfig

SmootherConfig(String) - Constructor for class dragon.config.SmootherConfig

solution_cache - Static variable in class dragon.ml.seqmodel.crf.LBFGS

The solution vector as it was at the end of the most recently completed line search.

sortByIndex() - Method in class dragon.ir.summarize.TopicSummary

sortByText() - Method in class dragon.ir.summarize.TopicSummary

sortByWegiht() - Method in class dragon.ir.summarize.TopicSummary

SortedArray - Class in dragon.util

A cute sorted array class which implements binary tree searching

SortedArray(int, Comparator) - Constructor for class dragon.util.SortedArray

SortedArray(int) - Constructor for class dragon.util.SortedArray

SortedArray(Comparator) - Constructor for class dragon.util.SortedArray

SortedArray() - Constructor for class dragon.util.SortedArray

SortedElement - Interface in dragon.nlp.compare

Interface for objects which are wieght-sortable, index-sortable, and frequency-sortable

SparseMatrix - Interface in dragon.matrix

Interface of sparse matrix

SparseMatrixConfig - Class in dragon.config

Sparse matrix configuration

SparseMatrixConfig() - Constructor for class dragon.config.SparseMatrixConfig

SparseMatrixConfig(ConfigureNode) - Constructor for class dragon.config.SparseMatrixConfig

SparseMatrixConfig(String) - Constructor for class dragon.config.SparseMatrixConfig

SparseMatrixFactory - Class in dragon.matrix

Sparse matrix factory is for storing, reading and expanding matrix operations

SparseMatrixFactory(String, int) - Constructor for class dragon.matrix.SparseMatrixFactory

start() - Method in interface dragon.ml.seqmodel.model.EdgeIterator

Starts scaning all edges in the graph

startDate - Variable in class dragon.onlinedb.pubmed.PubMedQuery

startPos - Variable in class dragon.ml.seqmodel.feature.FeatureTypeWindow

startScan() - Method in class dragon.ml.seqmodel.data.BasicDataset

startScan() - Method in interface dragon.ml.seqmodel.data.Dataset

Moves the pointer to the position before the first sequence.

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

startScanFeaturesAt(DataSequence, int, int) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Starts scanning features for the specified segment

startScanFeaturesAt(DataSequence, int, int) - Method in interface dragon.ml.seqmodel.feature.FeatureType

Starts scanning features of the given segment of a sequence

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeEdge

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeEnd

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeKnownWord

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypePosition

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypePosition

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypePOSPattern

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypePrior

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeRegexCount

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLength

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLengthPoly

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeSegmentLengthPoly

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeStart

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeStart

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeStateLoop

startScanFeaturesAt(DataSequence, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeTokenLoop

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeTokenLoop

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeUnknownWord

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeWindow

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

startScanFeaturesAt(DataSequence, int, int) - Method in class dragon.ml.seqmodel.feature.FeatureTypeWordScore

stateNum - Variable in class dragon.ml.seqmodel.feature.AbstractFeatureDictionary

statusOut - Variable in class dragon.ir.topicmodel.AbstractModel

stem(String) - Method in class dragon.nlp.tool.lemmatiser.EngLemmatiser

stem(String) - Method in interface dragon.nlp.tool.Lemmatiser

Gets the stem of the word.

stem(String) - Method in class dragon.nlp.tool.PorterStemmer

stem() - Method in class dragon.nlp.tool.PorterStemmer

Stem the word placed into the Lemmatiser buffer through calls to add().

stem(String) - Method in class dragon.nlp.tool.WordNetDidion

stpmax - Static variable in class dragon.ml.seqmodel.crf.LBFGS

Specify upper bound for the step in the line search.

stpmin - Static variable in class dragon.ml.seqmodel.crf.LBFGS

Specify lower bound for the step in the line search.

StructureSummarizer - Interface in dragon.ir.summarize

Interface of structural summarizer

styAt(int) - Method in class dragon.nlp.ontology.umls.UmlsSTYList

subconcept_enabled - Variable in class dragon.nlp.extract.AbstractConceptExtractor

SUBJ - Static variable in class dragon.nlp.Word

SuffixDetachOperation - Class in dragon.nlp.tool.lemmatiser

Suffix detach operation for lemmatising

SuffixEDetachOperation - Class in dragon.nlp.tool.lemmatiser

SuffixE detach operation for lemmatising

sumArray(double[]) - Static method in class dragon.util.MathUtil

sumArray(int[]) - Static method in class dragon.util.MathUtil

sumArray(double[], double[]) - Static method in class dragon.util.MathUtil

SummarizationEvaAppConfig - Class in dragon.config

Summarization evaluation configuration

SummarizationEvaAppConfig() - Constructor for class dragon.config.SummarizationEvaAppConfig

summarize(ArrayList, int) - Method in class dragon.ir.summarize.AbstractStructureSum

summarize(ArrayList) - Method in class dragon.ir.summarize.AbstractStructureSum

summarize(CollectionReader, int) - Method in class dragon.ir.summarize.ClusterLexRankSummarizer

summarize(CollectionReader, int) - Method in interface dragon.ir.summarize.GenericMultiDocSummarizer

summarize(CollectionReader, int) - Method in class dragon.ir.summarize.LexRankSummarizer

summarize(ArrayList, int) - Method in class dragon.ir.summarize.RelationGenerativeSum

summarize(ArrayList) - Method in interface dragon.ir.summarize.StructureSummarizer

summarize(ArrayList, int) - Method in interface dragon.ir.summarize.StructureSummarizer

The interpretation of the length is subject to the implementations.

summarize(ArrayList, int) - Method in class dragon.ir.summarize.TermGenerativeSum

SummarizerConfig - Class in dragon.config

Summarizer configuration

SummarizerConfig() - Constructor for class dragon.config.SummarizerConfig

SummarizerConfig(ConfigureNode) - Constructor for class dragon.config.SummarizerConfig

SummarizerConfig(String) - Constructor for class dragon.config.SummarizerConfig

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.amazon.AmazonCatalogQuery

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.amazon.AmazonReviewQuery

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.ArrayCollectionReader

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.BasicCollectionReader

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.citeulike.CiteULikeTagQuery

supportArticleKeyRetrieval() - Method in interface dragon.onlinedb.CollectionReader

if the query supports this retrieval mode, one can get articles by calling getArticleByKey method.

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.pubmed.PubMedQuery

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.searchengine.AbstractSearchEngine

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.SimpleCollectionReader

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.trec.AbstractTopicReader

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.trec.TrecCollectionReader

supportArticleKeyRetrieval() - Method in class dragon.onlinedb.trec.TrecFileReader

supportConceptEntry() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

supportConceptEntry() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

supportConceptEntry() - Method in class dragon.nlp.extract.AbstractTermExtractor

supportConceptEntry() - Method in class dragon.nlp.extract.AbstractTokenExtractor

supportConceptEntry() - Method in interface dragon.nlp.extract.ConceptExtractor

Tests if the extracted concept has an entry ID.

supportConceptEntry() - Method in interface dragon.nlp.extract.DualConceptExtractor

Tests if the extracted concept has an entry ID.

supportConceptName() - Method in class dragon.nlp.extract.AbstractDualConceptExtractor

supportConceptName() - Method in class dragon.nlp.extract.AbstractPhraseExtractor

supportConceptName() - Method in class dragon.nlp.extract.AbstractTermExtractor

supportConceptName() - Method in class dragon.nlp.extract.AbstractTokenExtractor

supportConceptName() - Method in interface dragon.nlp.extract.ConceptExtractor

Tests if the extracted concept has a name.

supportConceptName() - Method in interface dragon.nlp.extract.DualConceptExtractor

Tests if the extracted concept has a name.

supportSegment() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

supportSegment() - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

supportSegment - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

supportSegment() - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

supportSegment() - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

Tests if the feature generatore supports the segment labeling problem

supportSegment() - Method in interface dragon.ml.seqmodel.feature.FeatureType

Tests if the feature type supports generating features for segments.

supportSegment() - Method in class dragon.ml.seqmodel.feature.FeatureTypeUnknownWord

supportSegment() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

supportSegment() - Method in class dragon.ml.seqmodel.feature.FeatureTypeWordScore

SVD - Class in dragon.matrix.factorize

Singular Value Decompositin

SVD() - Constructor for class dragon.matrix.factorize.SVD

T

tag(Sentence) - Method in class dragon.nlp.tool.BrillTagger

tag(String) - Method in class dragon.nlp.tool.BrillTagger

The native function to call brill's POS tagger

tag(Sentence) - Method in class dragon.nlp.tool.HeppleTagger

tag(Sentence) - Method in class dragon.nlp.tool.MedPostTagger

tag(Sentence) - Method in interface dragon.nlp.tool.Tagger

This method will tag the part of speech of all words in the sentence.

tagger - Variable in class dragon.nlp.extract.AbstractPhraseExtractor

tagger - Variable in class dragon.nlp.extract.AbstractTermExtractor

Tagger - Interface in dragon.nlp.tool

Interface of part speech of tagger

tagger - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

TaggerConfig - Class in dragon.config

Tagger configuration

TaggerConfig() - Constructor for class dragon.config.TaggerConfig

TaggerConfig(ConfigureNode) - Constructor for class dragon.config.TaggerConfig

TaggerConfig(String) - Constructor for class dragon.config.TaggerConfig

tagList - Variable in class dragon.onlinedb.trec.SgmArticleParser

Term - Class in dragon.nlp

Term is designed for Universal Medical Langauge System (UMLS) medical concept that can stores n-grams and its semantic and statistical information

Term(Word, Word) - Constructor for class dragon.nlp.Term

Term(Word) - Constructor for class dragon.nlp.Term

term - Variable in class dragon.onlinedb.amazon.AmazonCatalogQuery

term - Variable in class dragon.onlinedb.amazon.AmazonReviewQuery

term - Variable in class dragon.onlinedb.citeulike.CiteULikeTagQuery

term - Variable in class dragon.onlinedb.pubmed.PubMedQuery

term - Variable in class dragon.onlinedb.searchengine.AbstractSearchEngine

termAt(int) - Method in class dragon.nlp.ontology.BasicTermList

termCache - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

termdocMatrix - Variable in class dragon.ir.index.AbstractIndexReader

TermExtractor - Interface in dragon.nlp.extract

Interface of Ontological Term Extractors

TermGenerativeSum - Class in dragon.ir.summarize

Generative term based summarization

TermGenerativeSum(IndexReader, double) - Constructor for class dragon.ir.summarize.TermGenerativeSum

termIndexList - Variable in class dragon.ir.index.AbstractIndexReader

termIndexList - Variable in class dragon.ir.index.AbstractIndexWriter

termIndexList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

termIndexList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

termKeyList - Variable in class dragon.ir.index.AbstractIndexReader

termKeyList - Variable in class dragon.ir.index.AbstractIndexWriteController

termKeyList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexReader

termKeyList - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

TermLemmaComparator - Class in dragon.nlp.compare

Compare lemma of two terms

TermLemmaComparator() - Constructor for class dragon.nlp.compare.TermLemmaComparator

termNum - Variable in class dragon.ir.topicmodel.AbstractTopicModel

test(Object, Object) - Method in class dragon.ir.query.Operator

TextUnit - Class in dragon.ir.summarize

Data structure for text unit

TextUnit(String) - Constructor for class dragon.ir.summarize.TextUnit

TextUnit(String, double) - Constructor for class dragon.ir.summarize.TextUnit

TextUnit(String, int, double) - Constructor for class dragon.ir.summarize.TextUnit

TextUtil - Class in dragon.util

Text related utilties

TextUtil(String) - Constructor for class dragon.util.TextUtil

TFIDFSmoother - Class in dragon.ir.search.smooth

TF-IDF Smoother for vector space model

TFIDFSmoother(IRCollection) - Constructor for class dragon.ir.search.smooth.TFIDFSmoother

TFIDFSmoother(IRCollection, double, double) - Constructor for class dragon.ir.search.smooth.TFIDFSmoother

themeBkgCoeffi - Variable in class dragon.ir.topicmodel.TwoDimensionEM

themeBkgModel - Variable in class dragon.ir.topicmodel.TwoDimensionEM

themeNum - Variable in class dragon.ir.topicmodel.AbstractTopicModel

themeNum - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

themeNum - Variable in class dragon.ir.topicmodel.CrossMixtureModel

themeTermNum - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

threshold - Variable in class dragon.ir.summarize.LexRankSummarizer

threshold - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

TITLE - Static variable in class dragon.nlp.Document

title - Variable in class dragon.onlinedb.BasicArticle

toBrillTaggerString() - Method in class dragon.nlp.Sentence

toByte(int) - Static method in class dragon.util.ByteArrayConvert

toByte(int, byte[], int) - Static method in class dragon.util.ByteArrayConvert

toByte(short) - Static method in class dragon.util.ByteArrayConvert

toByte(short, byte[], int) - Static method in class dragon.util.ByteArrayConvert

toByte(long) - Static method in class dragon.util.ByteArrayConvert

toByte(long, byte[], int) - Static method in class dragon.util.ByteArrayConvert

toByte(char) - Static method in class dragon.util.ByteArrayConvert

toByte(char, byte[], int) - Static method in class dragon.util.ByteArrayConvert

toByte(float) - Static method in class dragon.util.ByteArrayConvert

toByte(float, byte[], int) - Static method in class dragon.util.ByteArrayConvert

toByte(double) - Static method in class dragon.util.ByteArrayConvert

toByte(double, byte[], int) - Static method in class dragon.util.ByteArrayConvert

toByteArray() - Method in interface dragon.matrix.Cell

toByteArray() - Method in class dragon.matrix.DoubleCell

toByteArray() - Method in class dragon.matrix.IntCell

toByteArray() - Method in class dragon.util.ByteArrayWriter

toChar(byte[], int) - Static method in class dragon.util.ByteArrayConvert

toChar(byte[]) - Static method in class dragon.util.ByteArrayConvert

toDouble(byte[], int) - Static method in class dragon.util.ByteArrayConvert

toDouble(byte[]) - Static method in class dragon.util.ByteArrayConvert

toFloat(byte[], int) - Static method in class dragon.util.ByteArrayConvert

toFloat(byte[]) - Static method in class dragon.util.ByteArrayConvert

toHexString(byte[], int, int) - Static method in class dragon.util.ByteArrayConvert

toInt(byte[], int) - Static method in class dragon.util.ByteArrayConvert

toInt(byte[]) - Static method in class dragon.util.ByteArrayConvert

Token - Class in dragon.nlp

Token is a cute unit data structure for handling nlp task or other operations

Token(String) - Constructor for class dragon.nlp.Token

Token(int, int) - Constructor for class dragon.nlp.Token

Token(String, int, int) - Constructor for class dragon.nlp.Token

tokenAt(int) - Method in class dragon.nlp.ontology.umls.UmlsTokenList

TokenEvaluator - Class in dragon.ml.seqmodel.evaluate

Token based evaluator

TokenEvaluator(int) - Constructor for class dragon.ml.seqmodel.evaluate.TokenEvaluator

TokenExtractor - Interface in dragon.nlp.extract

Interface of token extractors

toLemmaString() - Method in class dragon.nlp.Phrase

toLemmaString() - Method in class dragon.nlp.Term

toLinkGrammarString() - Method in class dragon.nlp.Sentence

toLong(byte[], int) - Static method in class dragon.util.ByteArrayConvert

toLong(byte[]) - Static method in class dragon.util.ByteArrayConvert

toNormalizedString() - Method in class dragon.nlp.Term

toPattern() - Method in class dragon.util.WildCardFilter

topicIndexReader - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

TopicModel - Interface in dragon.ir.topicmodel

Interface of topic models

TopicModelConfig - Class in dragon.config

Topic model configuration

TopicModelConfig() - Constructor for class dragon.config.TopicModelConfig

TopicModelConfig(ConfigureNode) - Constructor for class dragon.config.TopicModelConfig

TopicModelConfig(String) - Constructor for class dragon.config.TopicModelConfig

TopicSignatureModel - Class in dragon.ir.kngbase

A program for topic signature model estimation

TopicSignatureModel(IRSignatureIndexList, IntSparseMatrix, IntSparseMatrix) - Constructor for class dragon.ir.kngbase.TopicSignatureModel

The constructor for the mode of the maximum likelihood estimator

TopicSignatureModel(IRSignatureIndexList, IntSparseMatrix) - Constructor for class dragon.ir.kngbase.TopicSignatureModel

The constructor for the mode of the maximum likelihood estimator

TopicSignatureModel(IRSignatureIndexList, IRSignatureIndexList, IntSparseMatrix) - Constructor for class dragon.ir.kngbase.TopicSignatureModel

The constructor for the mode of EM algorithm

TopicSignatureModel(IRSignatureIndexList, IntSparseMatrix, IRSignatureIndexList, IntSparseMatrix) - Constructor for class dragon.ir.kngbase.TopicSignatureModel

The constructor for the mode of EM algorithm

TopicSummary - Class in dragon.ir.summarize

Data structure for topic summary

TopicSummary(int) - Constructor for class dragon.ir.summarize.TopicSummary

toPOSTaggedString() - Method in class dragon.nlp.Sentence

topSolutions - Variable in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

toShort(byte[], int) - Static method in class dragon.util.ByteArrayConvert

toShort(byte[]) - Static method in class dragon.util.ByteArrayConvert

toSQLExpression() - Method in class dragon.ir.query.BoolExpression

toSQLExpression() - Method in class dragon.ir.query.BoolQualifierPredicate

toSQLExpression() - Method in class dragon.ir.query.BoolRelationPredicate

toSQLExpression() - Method in class dragon.ir.query.BoolTermPredicate

toSQLExpression() - Method in interface dragon.ir.query.Expression

toSQLExpression() - Method in interface dragon.ir.query.Predicate

toSQLExpression() - Method in class dragon.ir.query.SimpleExpression

toSQLExpression() - Method in class dragon.ir.query.SimpleRelationPredicate

toSQLExpression() - Method in class dragon.ir.query.SimpleTermPredicate

toString() - Method in class dragon.ir.query.AbstractIRQuery

toString() - Method in class dragon.ir.query.BoolExpression

toString() - Method in class dragon.ir.query.BoolQualifierPredicate

toString() - Method in class dragon.ir.query.BoolRelationPredicate

toString() - Method in class dragon.ir.query.BoolTermPredicate

toString() - Method in interface dragon.ir.query.Expression

toString() - Method in interface dragon.ir.query.IRQuery

toString() - Method in class dragon.ir.query.Operator

toString() - Method in interface dragon.ir.query.Predicate

toString() - Method in class dragon.ir.query.RelSimpleQuery

toString() - Method in class dragon.ir.query.SimpleExpression

toString() - Method in class dragon.ir.query.SimpleRelationPredicate

toString() - Method in class dragon.ir.query.SimpleTermPredicate

toString() - Method in interface dragon.matrix.Cell

toString() - Method in class dragon.matrix.DoubleCell

toString() - Method in class dragon.matrix.IntCell

toString() - Method in exception dragon.ml.seqmodel.crf.LBFGS.ExceptionWithIflag

toString() - Method in class dragon.ml.seqmodel.feature.BasicFeature

toString() - Method in class dragon.ml.seqmodel.feature.FeatureIdentifier

toString() - Method in class dragon.ml.seqmodel.feature.Window

toString() - Method in class dragon.nlp.ontology.BasicTerm

toString() - Method in class dragon.nlp.ontology.mesh.MeshNode

toString() - Method in class dragon.nlp.ontology.umls.UmlsCUI

toString() - Method in class dragon.nlp.ontology.umls.UmlsSTY

toString() - Method in class dragon.nlp.Phrase

toString() - Method in class dragon.nlp.Sentence

toString() - Method in class dragon.nlp.Term

toString() - Method in class dragon.nlp.Token

toString() - Method in class dragon.nlp.tool.PorterStemmer

After a word has been stemmed, it can be retrieved by toString(), or a reference to the internal buffer can be retrieved by getResultBuffer and getResultLength (which is generally more efficient.)

toString() - Method in class dragon.onlinedb.searchengine.WebLink

toString() - Method in class dragon.util.WildCardFilter

totalCell - Variable in class dragon.matrix.AbstractGiantSparseMatrix

totalCell - Variable in class dragon.matrix.AbstractSuperSparseMatrix

totalFeatures - Variable in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

totalLabels - Variable in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

totalLabels() - Method in class dragon.ml.seqmodel.evaluate.AbstractEvaluator

totalLabels() - Method in interface dragon.ml.seqmodel.evaluate.Evaluator

train(DocClassSet, DocClassSet) - Method in class dragon.ir.classification.AbstractClassifier

train(DocClassSet) - Method in interface dragon.ir.classification.Classifier

This method trains the classifier with the training document set.

train(DocClassSet, DocClassSet) - Method in interface dragon.ir.classification.Classifier

This method trains the classifier with the training document set and validating document set.

train(IndexReader, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

train(SparseMatrix, DocClassSet) - Method in class dragon.ir.classification.featureselection.AbstractFeatureSelector

train(SparseMatrix, DocClassSet) - Method in interface dragon.ir.classification.featureselection.FeatureSelector

This method chooses a subset of features for text classification.

train(IndexReader, DocClassSet) - Method in interface dragon.ir.classification.featureselection.FeatureSelector

This method chooses a subset of features for text classification

train(DocClassSet) - Method in class dragon.ir.classification.NBClassifier

train(DocClassSet) - Method in class dragon.ir.classification.NigamActiveLearning

train(DocClassSet) - Method in class dragon.ir.classification.SemanticNBClassifier

train(Dataset) - Method in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

train(Dataset) - Method in class dragon.ml.seqmodel.crf.LBFGSBasicTrainer

train(Dataset) - Method in interface dragon.ml.seqmodel.crf.Trainer

Trains the CRF model with labeled dataset

train(Dataset) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureType

train(Dataset) - Method in class dragon.ml.seqmodel.feature.AbstractFeatureTypeWrapper

train(Dataset) - Method in class dragon.ml.seqmodel.feature.BasicFeatureGenerator

train(Dataset) - Method in interface dragon.ml.seqmodel.feature.FeatureGenerator

This method will be called in training mode.

train(Dataset) - Method in interface dragon.ml.seqmodel.feature.FeatureType

Trains the feature types with the labeled training dataset

train(Dataset) - Method in class dragon.ml.seqmodel.feature.FeatureTypeWord

Trainer - Interface in dragon.ml.seqmodel.crf

Interface of CRF trainer

trainFeatureSelector(DocClassSet) - Method in class dragon.ir.classification.AbstractClassifier

trainWeightByInformationContent(ArrayList) - Method in class dragon.nlp.ontology.mesh.MeshSimilarity

translate(ConfigureNode) - Method in class dragon.config.TranslationAppConfig

translate(IntSparseMatrix, String, boolean, int, String, String, boolean, boolean, boolean, double, double) - Method in class dragon.config.TranslationAppConfig

TranslationAppConfig - Class in dragon.config

Translation probability application configuration

TranslationAppConfig() - Constructor for class dragon.config.TranslationAppConfig

transpose() - Method in class dragon.matrix.AbstractMatrix

transpose() - Method in class dragon.matrix.AbstractSparseMatrix

transpose() - Method in interface dragon.matrix.Cell

transpose() - Method in class dragon.matrix.DoubleCell

transpose(DoubleDenseMatrix, DoubleDenseMatrix) - Method in class dragon.matrix.factorize.AbstractFactorization

transpose() - Method in class dragon.matrix.IntCell

transpose() - Method in interface dragon.matrix.Matrix

if one has set the transposed matrix by calling the method setTranspose, this method simply return that transposed matrix.

TransposeIRMatrix - Class in dragon.ir.index

The class is used to transpose a given IR indexing matrix such as termdoc to docterm

TransposeIRMatrix() - Constructor for class dragon.ir.index.TransposeIRMatrix

transposeMatrix - Variable in class dragon.matrix.AbstractMatrix

TrecCollectionReader - Class in dragon.onlinedb.trec

TREC collection reader

TrecCollectionReader(ArticleParser) - Constructor for class dragon.onlinedb.trec.TrecCollectionReader

TrecCollectionReader(String, ArticleParser) - Constructor for class dragon.onlinedb.trec.TrecCollectionReader

TrecCollectionReader(String, String, ArticleParser) - Constructor for class dragon.onlinedb.trec.TrecCollectionReader

TrecEva - Class in dragon.ir.search.evaluate

Trec IR Peformance Evaluation Program

TrecEva(String) - Constructor for class dragon.ir.search.evaluate.TrecEva

TrecFileReader - Class in dragon.onlinedb.trec

TREC data file reader

TrecFileReader(ArticleParser) - Constructor for class dragon.onlinedb.trec.TrecFileReader

TrecFileReader(File, ArticleParser) - Constructor for class dragon.onlinedb.trec.TrecFileReader

Triple - Class in dragon.nlp

Triple is data structure for binary relation extracted from text

Triple(Concept, Concept) - Constructor for class dragon.nlp.Triple

TripleExtractor - Interface in dragon.nlp.extract

Interface of triple extractors

TripleExtractorConfig - Class in dragon.config

Triple extraction configuration

TripleExtractorConfig() - Constructor for class dragon.config.TripleExtractorConfig

TripleExtractorConfig(ConfigureNode) - Constructor for class dragon.config.TripleExtractorConfig

TripleExtractorConfig(String) - Constructor for class dragon.config.TripleExtractorConfig

tripleList - Variable in class dragon.nlp.extract.AbstractTripleExtractor

TwoDimensionEM - Class in dragon.ir.topicmodel

The EM based two dimesional topical model

TwoDimensionEM(IndexReader, IndexReader, double, double, double) - Constructor for class dragon.ir.topicmodel.TwoDimensionEM

TwoDimensionEM(IndexReader, DoubleVector, double, IndexReader, DoubleVector, double, double) - Constructor for class dragon.ir.topicmodel.TwoDimensionEM

TwoDimensionGibbsLDA - Class in dragon.ir.topicmodel

LDA Gibbs sampling two dimensional topical model

TwoDimensionGibbsLDA(IndexReader, IndexReader, double, double, double, double, double, double, double) - Constructor for class dragon.ir.topicmodel.TwoDimensionGibbsLDA

TwoDimensionModel - Interface in dragon.ir.topicmodel

Interface of two-dimensional topic models (in the progress)

TwoStageSmoother - Class in dragon.ir.search.smooth

Two-stage smoother

TwoStageSmoother(IRCollection, double, double) - Constructor for class dragon.ir.search.smooth.TwoStageSmoother

TYPE_NUMBER - Static variable in class dragon.nlp.Word

TYPE_PHRASE - Static variable in interface dragon.nlp.Concept

TYPE_PUNC - Static variable in class dragon.nlp.Word

TYPE_TERM - Static variable in interface dragon.nlp.Concept

TYPE_TOKEN - Static variable in interface dragon.nlp.Concept

TYPE_WORD - Static variable in class dragon.nlp.Word

U

UmlsAmbiguityOntology - Class in dragon.nlp.ontology.umls

UMLS ontology with sense disambiguation

UmlsAmbiguityOntology(Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

UmlsAmbiguityOntology(String, Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsAmbiguityOntology

UmlsCUI - Class in dragon.nlp.ontology.umls

Data structure for UMLS concept ID(CUI)

UmlsCUI(int, String, String[]) - Constructor for class dragon.nlp.ontology.umls.UmlsCUI

UmlsCUI(int, String, String[], String) - Constructor for class dragon.nlp.ontology.umls.UmlsCUI

UmlsCUIList - Class in dragon.nlp.ontology.umls

UMLS concept ID lists

UmlsCUIList() - Constructor for class dragon.nlp.ontology.umls.UmlsCUIList

UmlsCUIList(String) - Constructor for class dragon.nlp.ontology.umls.UmlsCUIList

UmlsCUIList(String, boolean) - Constructor for class dragon.nlp.ontology.umls.UmlsCUIList

UmlsCUIList(String, boolean, boolean) - Constructor for class dragon.nlp.ontology.umls.UmlsCUIList

UmlsDBOntology - Class in dragon.nlp.ontology.umls

UMLS Ontology has functions of reading ontology from database

UmlsDBOntology(Connection, Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsDBOntology

UmlsExactOntology - Class in dragon.nlp.ontology.umls

UMLS ontology for extracting UMLS defined medical concepts (CUIs) from text

UmlsExactOntology(Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsExactOntology

UmlsFileBackedOntology - Class in dragon.nlp.ontology.umls

The class has functions of readingUMLS ontology from file

UmlsFileBackedOntology(Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsFileBackedOntology

UmlsFileBackedOntology(String, Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsFileBackedOntology

UmlsOntology - Class in dragon.nlp.ontology.umls

Universal Medical Langauge System (UMLS) ontology

UmlsOntology(Lemmatiser) - Constructor for class dragon.nlp.ontology.umls.UmlsOntology

UmlsRelationNet - Class in dragon.nlp.ontology.umls

UMLS relation net for relation operations

UmlsRelationNet(String, UmlsSTYList) - Constructor for class dragon.nlp.ontology.umls.UmlsRelationNet

UmlsRelationNet(Connection, UmlsSTYList) - Constructor for class dragon.nlp.ontology.umls.UmlsRelationNet

UmlsSemanticNet - Class in dragon.nlp.ontology.umls

UMLS semantic net for semantic relation operations

UmlsSemanticNet(Ontology, UmlsSTYList, UmlsRelationNet) - Constructor for class dragon.nlp.ontology.umls.UmlsSemanticNet

UmlsSTY - Class in dragon.nlp.ontology.umls

UMLS semantic type

UmlsSTY(int, String, String, String, boolean) - Constructor for class dragon.nlp.ontology.umls.UmlsSTY

UmlsSTYList - Class in dragon.nlp.ontology.umls

List for storing UMLS semantic semantic types

UmlsSTYList(String) - Constructor for class dragon.nlp.ontology.umls.UmlsSTYList

UmlsSTYList(Connection) - Constructor for class dragon.nlp.ontology.umls.UmlsSTYList

UmlsTokenList - Class in dragon.nlp.ontology.umls

List for storing UMLS tokens

UmlsTokenList() - Constructor for class dragon.nlp.ontology.umls.UmlsTokenList

UmlsTokenList(String) - Constructor for class dragon.nlp.ontology.umls.UmlsTokenList

UmlsTokenList(String, boolean) - Constructor for class dragon.nlp.ontology.umls.UmlsTokenList

UNIT_ARTICLE - Static variable in class dragon.ir.summarize.TextUnit

UNIT_PARAGRAPH - Static variable in class dragon.ir.summarize.TextUnit

UNIT_RELATION - Static variable in class dragon.ir.summarize.TextUnit

UNIT_SENTENCE - Static variable in class dragon.ir.summarize.TextUnit

UNIT_TERM - Static variable in class dragon.ir.summarize.TextUnit

updateQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.AbstractFeedback

updateQueryModel(IRQuery) - Method in interface dragon.ir.search.feedback.Feedback

updateQueryModel(IRQuery) - Method in class dragon.ir.search.feedback.InformationFlowFeedback

updateWeights(DataSequence, int, int, double, double[]) - Method in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

useAdj - Variable in class dragon.nlp.extract.AbstractPhraseExtractor

useContinuousValue - Variable in class dragon.ir.summarize.LexRankSummarizer

useLog - Variable in class dragon.ir.search.smooth.AbstractSmoother

useNoun - Variable in class dragon.nlp.extract.AbstractPhraseExtractor

useRougeN(int) - Method in class dragon.ir.summarize.ROUGE

useRougeS() - Method in class dragon.ir.summarize.ROUGE

useRougeS(int) - Method in class dragon.ir.summarize.ROUGE

useTFIDF - Variable in class dragon.ir.summarize.LexRankSummarizer

useUpdated - Variable in class dragon.ml.seqmodel.crf.CollinsBasicTrainer

useVerb - Variable in class dragon.nlp.extract.AbstractPhraseExtractor

V

validatingDocSet - Variable in class dragon.ir.classification.AbstractClassifier

VerbOperation - Class in dragon.nlp.tool.lemmatiser

The verb operation removes the suffix such as -s, -es, -ed, -ing

VerbOperation(SortedArray) - Constructor for class dragon.nlp.tool.lemmatiser.VerbOperation

viewBkgCoeffi - Variable in class dragon.ir.topicmodel.TwoDimensionEM

viewBkgModel - Variable in class dragon.ir.topicmodel.TwoDimensionEM

viewIndexReader - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

viewNum - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

viewTermNum - Variable in class dragon.ir.topicmodel.AbstractTwoDimensionModel

ViterbiBasicLabeler - Class in dragon.ml.seqmodel.crf

Viterb basic labeler

ViterbiBasicLabeler(ModelGraph, FeatureGenerator) - Constructor for class dragon.ml.seqmodel.crf.ViterbiBasicLabeler

ViterbiSegmentLabeler - Class in dragon.ml.seqmodel.crf

Viterb segment labeler

ViterbiSegmentLabeler(ModelGraph, FeatureGenerator, int) - Constructor for class dragon.ml.seqmodel.crf.ViterbiSegmentLabeler

vocabulary - Variable in class dragon.nlp.extract.AbstractPhraseExtractor

Vocabulary - Interface in dragon.nlp.ontology

Inerface of Phrase Dictionary

VocabularyConfig - Class in dragon.config

Vocabulary configuration

VocabularyConfig() - Constructor for class dragon.config.VocabularyConfig

VocabularyConfig(ConfigureNode) - Constructor for class dragon.config.VocabularyConfig

VocabularyConfig(String) - Constructor for class dragon.config.VocabularyConfig

W

webEnv - Variable in class dragon.onlinedb.amazon.AmazonReviewQuery

webEnv - Variable in class dragon.onlinedb.pubmed.PubMedQuery

WebLink - Class in dragon.onlinedb.searchengine

Data structure to store a web link

WebLink(String) - Constructor for class dragon.onlinedb.searchengine.WebLink

WebLink(String, String) - Constructor for class dragon.onlinedb.searchengine.WebLink

WebLink(String, String, String) - Constructor for class dragon.onlinedb.searchengine.WebLink

WebLink(String, int, String, String) - Constructor for class dragon.onlinedb.searchengine.WebLink

weight - Variable in class dragon.ir.query.AbstractPredicate

WeightComparator - Class in dragon.nlp.compare

Comparing weight of two objects

WeightComparator() - Constructor for class dragon.nlp.compare.WeightComparator

WeightComparator(boolean) - Constructor for class dragon.nlp.compare.WeightComparator

WeightSortable - Interface in dragon.nlp.compare

Interface for weight-sortable objects

WildCardFilter - Class in dragon.util

The file filter which supports wild characters

WildCardFilter(String) - Constructor for class dragon.util.WildCardFilter

window - Variable in class dragon.ml.seqmodel.feature.FeatureTypeConcatRegex

Window - Class in dragon.ml.seqmodel.feature

Data structor for a window

Window(int, boolean, int, boolean) - Constructor for class dragon.ml.seqmodel.feature.Window

Window(int, boolean, int, boolean, String) - Constructor for class dragon.ml.seqmodel.feature.Window

Window(int, boolean, int, boolean, String, int, int) - Constructor for class dragon.ml.seqmodel.feature.Window

windows - Variable in class dragon.ml.seqmodel.feature.FeatureTypeWindow

Word - Class in dragon.nlp

This is a supporting class for Term and Phrase class which can contain multi words

Word(String) - Constructor for class dragon.nlp.Word

wordDelimitor - Variable in class dragon.nlp.extract.EngDocumentParser

wordKeyList - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

wordList - Variable in class dragon.nlp.tool.xtract.EngWordPairExpand

WordMap - Class in dragon.nlp.tool.lemmatiser

Wordmap is the data structure for two words which has mater and slave relation between them

WordMap(String, String) - Constructor for class dragon.nlp.tool.lemmatiser.WordMap

WordNetDidion - Class in dragon.nlp.tool

A Java-implementation of WordNet provided by Didion

WordNetDidion(String) - Constructor for class dragon.nlp.tool.WordNetDidion

WordNetDidion() - Constructor for class dragon.nlp.tool.WordNetDidion

WordNetUtil - Interface in dragon.nlp.tool

Interface of WordNet (incomplete version)

WordPairExpand - Interface in dragon.nlp.tool.xtract

Title:

WordPairFilter - Class in dragon.nlp.tool.xtract

Filtering word pairs that is not satisfied with Xtract statistics

WordPairFilter(String, int, double, double, double) - Constructor for class dragon.nlp.tool.xtract.WordPairFilter

WordPairGenerator - Interface in dragon.nlp.tool.xtract

Title:

WordPairIndexer - Interface in dragon.nlp.tool.xtract

Title:

WordPairStat - Class in dragon.nlp.tool.xtract

Couting word pair statistics

WordPairStat(int, int, int) - Constructor for class dragon.nlp.tool.xtract.WordPairStat

WordPairStat(int, int, int, int) - Constructor for class dragon.nlp.tool.xtract.WordPairStat

wordpairStatList - Variable in class dragon.nlp.tool.xtract.EngWordPairIndexer

WordPairStatList - Class in dragon.nlp.tool.xtract

List of word pairs with statistical information

WordPairStatList(String, int, boolean) - Constructor for class dragon.nlp.tool.xtract.WordPairStatList

write(int, ArrayList) - Method in class dragon.ir.index.AbstractIndexer

write(int, ArrayList, ArrayList) - Method in class dragon.ir.index.AbstractIndexer

write(IRDoc, IRTerm[], IRRelation[]) - Method in class dragon.ir.index.AbstractIndexWriter

write(IRDoc, IRTerm[]) - Method in class dragon.ir.index.AbstractIndexWriter

write(int, ArrayList) - Method in class dragon.ir.index.BasicIndexer

write(int, ArrayList, ArrayList) - Method in class dragon.ir.index.BasicIndexer

write(int, ArrayList) - Method in class dragon.ir.index.BasicIndexWriteController

write(int, ArrayList, ArrayList) - Method in class dragon.ir.index.BasicIndexWriteController

write(IRDoc, IRTerm[], IRRelation[]) - Method in interface dragon.ir.index.IndexWriter

All fields (doc key, doc index, term count, term number, relation count, and relation number) of the IRDoc object should be set.

write(IRDoc, IRTerm[]) - Method in interface dragon.ir.index.IndexWriter

All fields (doc key, doc index, term count, term number, relation count, and relation number) of the IRDoc object should be set.

write(int, ArrayList) - Method in class dragon.ir.index.OnlineIndexer

write(int, ArrayList, ArrayList) - Method in class dragon.ir.index.OnlineIndexer

write(ArrayList) - Method in class dragon.ir.index.OnlineIndexWriteController

write(ArrayList, ArrayList) - Method in class dragon.ir.index.OnlineIndexWriteController

write(ArrayList) - Method in class dragon.ir.index.sentence.BasicSentenceWriteController

write(ArrayList, ArrayList) - Method in class dragon.ir.index.sentence.BasicSentenceWriteController

write(IRDoc, IRTerm[], IRRelation[]) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

write(IRDoc, IRTerm[]) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexWriter

write(int, ArrayList) - Method in class dragon.ir.query.QueryWriter

write(int, ArrayList, ArrayList) - Method in class dragon.ir.query.QueryWriter

write(Dataset) - Method in interface dragon.ml.seqmodel.data.DataWriter

Writes out the whole dataset

write(DataSequence) - Method in interface dragon.ml.seqmodel.data.DataWriter

Writes out one data sequence

write(Dataset) - Method in class dragon.ml.seqmodel.data.FlatSegmentWriter

write(DataSequence) - Method in class dragon.ml.seqmodel.data.FlatSegmentWriter

write(String) - Method in interface dragon.ml.seqmodel.feature.FeatureDictionary

write(String) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryChar

write(String) - Method in class dragon.ml.seqmodel.feature.FeatureDictionaryNum

write(PrintWriter) - Method in class dragon.ml.seqmodel.feature.FeatureMap

write(int) - Method in class dragon.util.ByteArrayWriter

write(byte[]) - Method in class dragon.util.ByteArrayWriter

write(byte[], int, int) - Method in class dragon.util.ByteArrayWriter

write(byte[], int, int) - Method in class dragon.util.FastBinaryWriter

write(InputStream, long) - Method in class dragon.util.FastBinaryWriter

write(RandomAccessFile, long) - Method in class dragon.util.FastBinaryWriter

writeBoolean(boolean) - Method in class dragon.util.ByteArrayWriter

writeByte(int) - Method in class dragon.util.ByteArrayWriter

writeBytes(String) - Method in class dragon.util.ByteArrayWriter

writeChar(int) - Method in class dragon.util.ByteArrayWriter

writeChars(String) - Method in class dragon.util.ByteArrayWriter

writeDouble(double) - Method in class dragon.util.ByteArrayWriter

writeFloat(float) - Method in class dragon.util.ByteArrayWriter

writeInt(int) - Method in class dragon.util.ByteArrayWriter

writeLog(String) - Method in class dragon.ir.index.AbstractIndexer

writeLog(String) - Method in class dragon.ir.index.DualIndexer

writeLog(String) - Method in class dragon.ir.index.sentence.AbstractSentenceIndexer

writeLog(String) - Method in class dragon.ir.index.sequence.AbstractSequenceIndexer

writeLong(long) - Method in class dragon.util.ByteArrayWriter

writer - Variable in class dragon.ir.index.sequence.AbstractSequenceIndexer

writer - Variable in class dragon.ir.query.BasicQueryGenerator

writeShort(int) - Method in class dragon.util.ByteArrayWriter

writeUTF(String) - Method in class dragon.util.ByteArrayWriter

WU_PALMER - Static variable in class dragon.nlp.ontology.mesh.MeshSimilarity

X

xtol - Static variable in class dragon.ml.seqmodel.crf.AbstractTrainer

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