public class UmlsDBOntology extends UmlsExactOntology implements Ontology
UMLS Ontology has functions of reading ontology from database
Copyright: Copyright (c) 2003
Company: IST, Drexel University
| Constructor and Description |
|---|
UmlsDBOntology(Connection con,
Lemmatiser lemmatiser) |
| Modifier and Type | Method and Description |
|---|---|
void |
closeConnection() |
Connection |
getConnection() |
String[] |
getCUI(String term)
Gets all possible concept ids the specified term has
|
SemanticNet |
getSemanticNet()
Gets the semantic network of the ontology
|
String[] |
getSemanticType(String cui)
Gets all possible semantic types of the given concept
|
String[] |
getSemanticType(String[] cuis)
Gets all possible semantic types of the given concepts
|
boolean |
isTerm(String term)
Tests if the given term is defined in the ontology.
|
buildNormalizedTerm, findAllTerms, findAllTerms, findTerm, findTerm, getCUI, isTermbuildString, getAdjectiveTermOption, getCoordinateOption, getLemma, getLemmaOption, getNonBoundaryPunctuation, getNPPOption, getSenseDisambiguationOption, getSimilarityMetric, isBoundaryWord, isStartingWord, isUsefulForTerm, setAdjectiveTermOption, setCoordinateOption, setLemmaOption, setNonBoundaryPunctuation, setNPPOption, setSenseDisambiguationOptionclone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, waitfindAllTerms, findAllTerms, findTerm, findTerm, getAdjectiveTermOption, getCoordinateOption, getCUI, getLemmaOption, getNPPOption, getSenseDisambiguationOption, getSimilarityMetric, isStartingWord, isTerm, setAdjectiveTermOption, setCoordinateOption, setLemmaOption, setNPPOption, setSenseDisambiguationOptionpublic UmlsDBOntology(Connection con, Lemmatiser lemmatiser)
public Connection getConnection()
public void closeConnection()
public SemanticNet getSemanticNet()
OntologygetSemanticNet in interface OntologygetSemanticNet in class AbstractOntologypublic String[] getSemanticType(String[] cuis)
OntologygetSemanticType in interface OntologygetSemanticType in class UmlsExactOntologycuis - the set of conceptspublic String[] getSemanticType(String cui)
OntologygetSemanticType in interface OntologygetSemanticType in class UmlsExactOntologycui - the concept idpublic String[] getCUI(String term)
OntologygetCUI in interface OntologygetCUI in class UmlsExactOntologyterm - the term for testingpublic boolean isTerm(String term)
OntologyisTerm in interface OntologyisTerm in class UmlsExactOntologyterm - the term for testingCopyright © 2018 JULIE Lab, Germany. All rights reserved.