dragon.nlp.ontology.umls

Class UmlsCUIList

java.lang.Object

java.util.AbstractCollection<E>

java.util.AbstractList<E>

java.util.ArrayList

dragon.util.SortedArray

dragon.nlp.ontology.umls.UmlsCUIList

All Implemented Interfaces:

Serializable, Cloneable, Iterable, Collection, List, RandomAccess

public class UmlsCUIList
extends SortedArray

UMLS concept ID lists

Copyright: Copyright (c) 2005

Company: IST, Drexel University

Version:

1.0

Author:

Davis Zhou

See Also:

Serialized Form

Field Summary

Fields inherited from class java.util.AbstractList

modCount

Constructor Summary

Constructors

Constructor and Description
UmlsCUIList()
UmlsCUIList(String cuiFile)
UmlsCUIList(String cuiFile, boolean loadConceptName)
UmlsCUIList(String cuiFile, boolean binary, boolean loadConceptName)

Method Summary

Modifier and Type	Method and Description
boolean	add(String cui, String[] stys)
UmlsCUI	cuiAt(int index)
ArrayList	getListSortedByIndex()
UmlsCUI	lookup(String cui)
UmlsCUI	lookup(UmlsCUI cui)
void	saveTo(String filename)
void	saveTo(String filename, boolean binary)

Methods inherited from class dragon.util.SortedArray

add, binarySearch, binarySearch, binarySearch, binarySearch, binarySearch, binarySearch, binarySearch, contains, copy, copy, getComparator, insertedPos, setComparator

Methods inherited from class java.util.ArrayList

add, addAll, addAll, clear, clone, ensureCapacity, forEach, get, indexOf, isEmpty, iterator, lastIndexOf, listIterator, listIterator, remove, remove, removeAll, removeIf, removeRange, replaceAll, retainAll, set, size, sort, spliterator, subList, toArray, toArray, trimToSize

Methods inherited from class java.util.AbstractList

equals, hashCode

Methods inherited from class java.util.AbstractCollection

containsAll, toString

Methods inherited from class java.lang.Object

finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface java.util.List

containsAll, equals, hashCode

Methods inherited from interface java.util.Collection

parallelStream, stream

Constructor Detail

UmlsCUIList

public UmlsCUIList()

UmlsCUIList

public UmlsCUIList(String cuiFile)

UmlsCUIList

public UmlsCUIList(String cuiFile,
                   boolean loadConceptName)

UmlsCUIList

public UmlsCUIList(String cuiFile,
                   boolean binary,
                   boolean loadConceptName)

Method Detail

cuiAt

public UmlsCUI cuiAt(int index)

getListSortedByIndex

public ArrayList getListSortedByIndex()

add

public boolean add(String cui,
                   String[] stys)

lookup

public UmlsCUI lookup(String cui)

lookup

public UmlsCUI lookup(UmlsCUI cui)

saveTo

public void saveTo(String filename)

saveTo

public void saveTo(String filename,
                   boolean binary)