public class SequenceFileReader extends Object implements SequenceReader
The file reader for reading sequencial data from file
Copyright: Copyright (c) 2005
Company: IST, Drexel University
| Constructor and Description |
|---|
SequenceFileReader(String seqIndexFile,
String seqMatrixFile) |
| Modifier and Type | Method and Description |
|---|---|
void |
close() |
int[] |
getSequence(int seqIndex)
For example, a document or a setence could be treated as a seuqnce.
|
int |
getSequenceLength(int seqIndex) |
void |
initialize()
It is required to call this method before reading out sequence information from indexing files.
|
public void initialize()
SequenceReaderinitialize in interface SequenceReaderpublic int getSequenceLength(int seqIndex)
getSequenceLength in interface SequenceReaderpublic int[] getSequence(int seqIndex)
SequenceReadergetSequence in interface SequenceReaderpublic void close()
close in interface SequenceReaderCopyright © 2018 JULIE Lab, Germany. All rights reserved.