public class OnlineSequenceBase extends Object implements SequenceReader, SequenceWriter
The online sequence base information class
Copyright: Copyright (c) 2005
Company: IST, Drexel University
| Constructor and Description |
|---|
OnlineSequenceBase() |
| Modifier and Type | Method and Description |
|---|---|
boolean |
addSequence(int index,
int[] seq) |
void |
close() |
int[] |
getSequence(int index)
For example, a document or a setence could be treated as a seuqnce.
|
int |
getSequenceLength(int index) |
void |
initialize()
It is required to call this method before reading out sequence information from indexing files.
|
public void initialize()
SequenceReaderinitialize in interface SequenceReaderinitialize in interface SequenceWriterpublic void close()
close in interface SequenceReaderclose in interface SequenceWriterpublic int[] getSequence(int index)
SequenceReadergetSequence in interface SequenceReaderpublic int getSequenceLength(int index)
getSequenceLength in interface SequenceReaderpublic boolean addSequence(int index,
int[] seq)
addSequence in interface SequenceWriterCopyright © 2018 JULIE Lab, Germany. All rights reserved.