A C D E G I M O P R S T V W

A

addCssExt(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Enqueues loading of a stylesheet resource file.

addCssResource(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Enqueues loading of a stylesheet resource file.

addScriptExt(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Enqueues loading of a JavaScript resource file.

addScriptResource(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Enqueues loading of a JavaScript resource file.

C

COMPONENT_FAMILY - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Component family returned by MolPluginCore.getFamily()

COMPONENT_TYPE - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

COMPONENT_TYPE - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSComponent

COMPONENT_TYPE - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSComponent

D

de.ipb_halle.molecularfaces.component.molplugin - package de.ipb_halle.molecularfaces.component.molplugin

de.ipb_halle.molecularfaces.converter - package de.ipb_halle.molecularfaces.converter

de.ipb_halle.molecularfaces.util - package de.ipb_halle.molecularfaces.util

de.ipb_halle.molecularfaces.validator - package de.ipb_halle.molecularfaces.validator

decode(FacesContext, UIComponent) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginRenderer

DEFAULT_FORMAT - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

DEFAULT_HEIGHT - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

DEFAULT_RENDERER - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

DEFAULT_RENDERER - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSComponent

DEFAULT_RENDERER - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSComponent

DEFAULT_WIDTH - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

DummyConverter - Class in de.ipb_halle.molecularfaces.converter

This converter does not perform any conversions.

DummyConverter() - Constructor for class de.ipb_halle.molecularfaces.converter.DummyConverter

E

encodeBegin(FacesContext, UIComponent) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSRenderer

encodeBegin(FacesContext, UIComponent) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSRenderer

encodeBegin(FacesContext, UIComponent) - Method in class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSRenderer

encodeLoadExtResources(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Creates an inline JavaScript code fragment for loading resources that have been enqueued via MolPluginCore.addScriptExt(String) and MolPluginCore.addCssExt(String).

G

generateDivStyle(MolPluginCore) - Static method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginRenderer

Generate the inline css style for the <div> element of the rendered editor or viewer.

getAsObject(FacesContext, UIComponent, String) - Method in class de.ipb_halle.molecularfaces.converter.DummyConverter

getAsObject(FacesContext, UIComponent, String) - Method in class de.ipb_halle.molecularfaces.converter.MDLV2000Converter

Converts a MDL Molfile V2000 string to an IAtomContainer.

getAsObject(FacesContext, UIComponent, String) - Method in class de.ipb_halle.molecularfaces.converter.MDLV3000Converter

Converts a MDL Molfile V3000 string to an IAtomContainer.

getAsString(FacesContext, UIComponent, Object) - Method in class de.ipb_halle.molecularfaces.converter.DummyConverter

getAsString(FacesContext, UIComponent, Object) - Method in class de.ipb_halle.molecularfaces.converter.MDLV2000Converter

Converts an IAtomContainer to a MDL Molfile V2000 string.

getAsString(FacesContext, UIComponent, Object) - Method in class de.ipb_halle.molecularfaces.converter.MDLV3000Converter

Converts an IAtomContainer to a MDL Molfile V3000 string.

getContextParam(String, FacesContext, String) - Method in interface de.ipb_halle.molecularfaces.util.WebXml

Obtains the param-value for the context-param given by param-name via the given FacesContext instance.

getContextParam(String, String) - Method in interface de.ipb_halle.molecularfaces.util.WebXml

Obtains the param-value for the context-param given by param-name via the current FacesContext instance.

getContextParam(String, FacesContext, String) - Method in class de.ipb_halle.molecularfaces.util.WebXmlImpl

getConvertedValue(FacesContext, UIComponent, Object) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginRenderer

getFamily() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

getFamily() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSComponent

getFamily() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

getFamily() - Method in class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSComponent

getFormat() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Return the value of the format property.

getHeight() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Return the value of the height property.

getValueAsString(FacesContext, MolPluginCore) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginRenderer

Converts a component's value to a string by invoking the component's converter's Converter.getAsString(FacesContext, UIComponent, Object) method.

getWidgetVar() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Return the value of the widgetVar property.

getWidth() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Return the value of the width property.

I

initialize(Molfile) - Method in class de.ipb_halle.molecularfaces.validator.MolfileValidator

isBorder() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Return the value of the border property.

isReadonly() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Return the value of the readonly property.

isValid(String, ConstraintValidatorContext) - Method in class de.ipb_halle.molecularfaces.validator.MolfileValidator

M

MarvinJSComponent - Class in de.ipb_halle.molecularfaces.component.molplugin

This UIComponent renders a chemical structure editor or viewer using the Marvin JS JavaScript plugin.

MarvinJSComponent() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

MarvinJSRenderer - Class in de.ipb_halle.molecularfaces.component.molplugin

This Renderer renders a chemical structure editor or viewer using the Marvin JS Javascript plugin.

MarvinJSRenderer() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSRenderer

MDLV2000Converter - Class in de.ipb_halle.molecularfaces.converter

This FacesConverter converts MDL Molfile V2000 strings to CDK's IAtomContainer objects and vice versa.

MDLV2000Converter() - Constructor for class de.ipb_halle.molecularfaces.converter.MDLV2000Converter

MDLV3000Converter - Class in de.ipb_halle.molecularfaces.converter

This FacesConverter converts MDL Molfile V3000 strings to CDK's IAtomContainer objects and vice versa.

MDLV3000Converter() - Constructor for class de.ipb_halle.molecularfaces.converter.MDLV3000Converter

Molfile - Annotation Type in de.ipb_halle.molecularfaces.validator

Molfile check constraint.

Molfile.Format - Enum in de.ipb_halle.molecularfaces.validator

Molfile.Mode - Enum in de.ipb_halle.molecularfaces.validator

MolfileValidator - Class in de.ipb_halle.molecularfaces.validator

Checks that a given String is a valid MDL Molfile according to the CDK library.

MolfileValidator() - Constructor for class de.ipb_halle.molecularfaces.validator.MolfileValidator

MolPaintJSComponent - Class in de.ipb_halle.molecularfaces.component.molplugin

This UIComponent renders a chemical structure editor or viewer using the MolPaintJS JavaScript plugin.

MolPaintJSComponent() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSComponent

MolPaintJSRenderer - Class in de.ipb_halle.molecularfaces.component.molplugin

This Renderer renders a chemical structure editor or viewer using the MolPaintJS Javascript plugin.

MolPaintJSRenderer() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSRenderer

MolPluginCore - Class in de.ipb_halle.molecularfaces.component.molplugin

This class holds the attribute states of the chemical structure plugins and provides support for dynamic resource loading.

MolPluginCore() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

MolPluginCore.Format - Enum in de.ipb_halle.molecularfaces.component.molplugin

Possible values for the format property.

MolPluginCore.PluginType - Enum in de.ipb_halle.molecularfaces.component.molplugin

Supported chemical structure plugin types.

MolPluginCore.PropertyKeys - Enum in de.ipb_halle.molecularfaces.component.molplugin

MolPluginRenderer - Class in de.ipb_halle.molecularfaces.component.molplugin

This Renderer offers functionalities for the specific renderers of MolPluginCore-derived molecular structure plugin components.

MolPluginRenderer() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.MolPluginRenderer

O

OpenChemLibJSComponent - Class in de.ipb_halle.molecularfaces.component.molplugin

This UIComponent renders a chemical structure editor or viewer using the OpenChemLib JS JavaScript plugin.

OpenChemLibJSComponent() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSComponent

OpenChemLibJSRenderer - Class in de.ipb_halle.molecularfaces.component.molplugin

This Renderer renders a chemical structure editor or viewer using the OpenChemLib JS Javascript plugin.

OpenChemLibJSRenderer() - Constructor for class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSRenderer

P

processEvent(ComponentSystemEvent) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

processPostAddToViewEvent() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

processPostAddToViewEvent() - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Interested client components can override this method to execute code in the PostAddToViewEvent of the component.

R

RENDERER_TYPE - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSRenderer

RENDERER_TYPE - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSRenderer

RENDERER_TYPE - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSRenderer

S

setBorder(boolean) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Set the value of the border property.

setFormat(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Set the value of the format property.

setHeight(int) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Set the value of the height property.

setReadonly(boolean) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Set the value of the readonly property.

setWidgetVar(String) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Set the value of the widgetVar property.

setWidth(int) - Method in class de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore

Set the value of the width property.

T

toString() - Method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.Format

toString() - Method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.PluginType

V

valueOf(String) - Static method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.Format

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.PluginType

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.PropertyKeys

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum de.ipb_halle.molecularfaces.validator.Molfile.Format

Returns the enum constant of this type with the specified name.

valueOf(String) - Static method in enum de.ipb_halle.molecularfaces.validator.Molfile.Mode

Returns the enum constant of this type with the specified name.

values() - Static method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.Format

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.PluginType

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum de.ipb_halle.molecularfaces.component.molplugin.MolPluginCore.PropertyKeys

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum de.ipb_halle.molecularfaces.validator.Molfile.Format

Returns an array containing the constants of this enum type, in the order they are declared.

values() - Static method in enum de.ipb_halle.molecularfaces.validator.Molfile.Mode

Returns an array containing the constants of this enum type, in the order they are declared.

W

WebXml - Interface in de.ipb_halle.molecularfaces.util

This interface offers methods to obtain information from web.xml.

WEBXML_CUSTOM_RESOURCE_URL - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MolPaintJSComponent

Name of the context-param in web.xml that specifies the location of molpaint.js relative to the application's context root.

WEBXML_CUSTOM_RESOURCE_URL - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.OpenChemLibJSComponent

Name of the context-param in web.xml that specifies the location of openchemlib-full.js relative to the application's context root.

WEBXML_MARVINJS_BASE_URL - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

Name of the context-param in web.xml that specifies the location of the extracted Marvin JS archive (marvinjs-version-core.zip) relative to the application's context root.

WEBXML_MARVINJS_LICENSE_URL - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

Name of the context-param in web.xml that specifies the location of Marvin JS' license file (marvin4js-license.cxl) relative to WEBXML_MARVINJS_BASE_URL.

WEBXML_MARVINJS_WEBSERVICES - Static variable in class de.ipb_halle.molecularfaces.component.molplugin.MarvinJSComponent

Name of the context-param in web.xml that specifies if Marvin JS should use its webservices.

WebXmlImpl - Class in de.ipb_halle.molecularfaces.util

This class implements methods to obtain information from web.xml.

WebXmlImpl() - Constructor for class de.ipb_halle.molecularfaces.util.WebXmlImpl

A C D E G I M O P R S T V W