de.bioforscher.singa.simulation.modules.reactions.implementations.kineticLaws.implementations

Class MichaelisMentenWithKCat

java.lang.Object

de.bioforscher.singa.simulation.modules.reactions.implementations.kineticLaws.implementations.MichaelisMentenWithKCat

All Implemented Interfaces:

KineticLaw

public class MichaelisMentenWithKCat
extends Object
implements KineticLaw

Author:

cl

Field Summary

Fields

Modifier and Type	Field and Description
static KineticParameterType	KCAT
static KineticParameterType	VMAX

Constructor Summary

Constructors

Constructor and Description
MichaelisMentenWithKCat(ChemicalEntity substrate, Enzyme enzyme)
MichaelisMentenWithKCat(ChemicalEntity substrate, Enzyme enzyme, EntityDependentKineticParameter<MolarConcentration> km, KineticParameter<ReactionRate> kCat)

Method Summary

Modifier and Type	Method and Description
javax.measure.Quantity<ReactionRate>	calculateAcceleration(BioNode node, CellSection section)
List<KineticParameterType>	getRequiredParameters()
void	prepareAppliedRateConstants()

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

KCAT

public static final KineticParameterType KCAT

VMAX

public static final KineticParameterType VMAX

Constructor Detail

MichaelisMentenWithKCat

public MichaelisMentenWithKCat(ChemicalEntity substrate,
                               Enzyme enzyme)

MichaelisMentenWithKCat

public MichaelisMentenWithKCat(ChemicalEntity substrate,
                               Enzyme enzyme,
                               EntityDependentKineticParameter<MolarConcentration> km,
                               KineticParameter<ReactionRate> kCat)

Method Detail

calculateAcceleration

public javax.measure.Quantity<ReactionRate> calculateAcceleration(BioNode node,
                                                                  CellSection section)

Specified by:

calculateAcceleration in interface KineticLaw

prepareAppliedRateConstants

public void prepareAppliedRateConstants()

Specified by:

prepareAppliedRateConstants in interface KineticLaw

getRequiredParameters

public List<KineticParameterType> getRequiredParameters()

Specified by:

getRequiredParameters in interface KineticLaw