Uses of Class
de.bioforscher.singa.simulation.modules.model.Simulation

Packages that use Simulation

Package	Description
de.bioforscher.singa.simulation.modules.model

Uses of Simulation in de.bioforscher.singa.simulation.modules.model

Methods in de.bioforscher.singa.simulation.modules.model that return Simulation

Modifier and Type	Method and Description
static Simulation	SimulationExamples.createCompartmentTestEnvironment()
static Simulation	SimulationExamples.createDecompositionReactionExample() This simulation simulates the thermal decomposition of dinitrogen pentaoxide.
static Simulation	SimulationExamples.createDiffusionModuleExample(int numberOfNodes, javax.measure.Quantity<javax.measure.quantity.Time> timeStep) This simulation simulates a diffusion of small molecules in a rectangular gird graph.
static Simulation	SimulationExamples.createEquilibriumReactionExample() This simulation simulates a equilibrium reaction.
static Simulation	SimulationExamples.createIodineMultiReactionExample() This simulation simulates a multiple reactions involving iodine.
static Simulation	SimulationExamples.createMichaelisMentenReactionExample() This simulation simulates a BiochemicalReaction, where D-Fructose 1-phosphate is convertet to glycerone phosphate and D-glyceraldehyde using fructose bisphosphate aldolase.
static Simulation	SimulationExamples.createPassiveMembraneTransportExample()
static Simulation	SimulationExamples.createSimulationFromSBML()
static Simulation	SimulationExamples.createSynthesisReactionExample() This simulation simulates the synthesis of 1,3,5-octatriene (C8H12) from Buta-1,3-diene (C4H6).