de.bioforscher.singa.simulation.model.compartments

Class CellSection

java.lang.Object

de.bioforscher.singa.simulation.model.compartments.CellSection

All Implemented Interfaces:

Nameable

Direct Known Subclasses:

EnclosedCompartment, Membrane

public abstract class CellSection
extends Object
implements Nameable

A CellSection is everything that can be considered a part of the cell. It is characterized by a SimpleStringIdentifier. The content of a cell section is defined by a set of nodes.

Author:

cl

Constructor Summary

Constructors

Constructor and Description
CellSection(String identifier, String name) Creates a new CellSection with the given identifier and name.

Method Summary

Modifier and Type	Method and Description
void	addNode(BioNode node) Adds a node to the section, without altering the state of the node.
boolean	equals(Object o)
Set<BioNode>	getContent() Returns the nodes belonging to this cell section.
String	getIdentifier() Returns the identifier of this cell section.
String	getName()
int	hashCode()
void	setContent(Set<BioNode> content) Sets the content of this cell section.

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

CellSection

public CellSection(String identifier,
                   String name)

Creates a new CellSection with the given identifier and name.

Parameters:

identifier - The identifier (should be unique).

name - The qualified name.

Method Detail

getIdentifier

public String getIdentifier()

Returns the identifier of this cell section.

Returns:

The identifier of this cell section.

getName

public String getName()

Specified by:

getName in interface Nameable

getContent

public Set<BioNode> getContent()

Returns the nodes belonging to this cell section.

Returns:

The nodes belonging to this section.

setContent

public void setContent(Set<BioNode> content)

Sets the content of this cell section.

Parameters:

content - The nodes contained in this cell section.

addNode

public void addNode(BioNode node)

Adds a node to the section, without altering the state of the node.

Parameters:

node - The node to add.

equals

public boolean equals(Object o)

Overrides:

equals in class Object

hashCode

public int hashCode()

Overrides:

hashCode in class Object