de.bioforscher.singa.sequence.algorithms.alignment

Class DynamicProgrammingEdge

java.lang.Object

de.bioforscher.singa.mathematics.graphs.model.AbstractEdge<NodeType>

de.bioforscher.singa.mathematics.graphs.model.DirectedWeightedEdge<DynamicProgrammingNode>

de.bioforscher.singa.sequence.algorithms.alignment.DynamicProgrammingEdge

All Implemented Interfaces:

de.bioforscher.singa.mathematics.graphs.model.Edge<DynamicProgrammingNode>, de.bioforscher.singa.mathematics.graphs.model.Weighted<Double>

public class DynamicProgrammingEdge
extends de.bioforscher.singa.mathematics.graphs.model.DirectedWeightedEdge<DynamicProgrammingNode>

Author:

cl

Field Summary

Fields inherited from class de.bioforscher.singa.mathematics.graphs.model.AbstractEdge

identifier, source, target

Constructor Summary

Constructors

Constructor and Description
DynamicProgrammingEdge(int identifier)
DynamicProgrammingEdge(int identifier, double weight)
DynamicProgrammingEdge(int identifier, double weight, AminoAcidFamily first, AminoAcidFamily second)

Method Summary

Modifier and Type	Method and Description
AminoAcidFamily	getFirst()
AminoAcidFamily	getSecond()
void	setFirst(AminoAcidFamily first)
void	setSecond(AminoAcidFamily second)

Methods inherited from class de.bioforscher.singa.mathematics.graphs.model.DirectedWeightedEdge

getWeight, setWeight

Methods inherited from class de.bioforscher.singa.mathematics.graphs.model.AbstractEdge

containsNode, equals, getIdentifier, getSource, getTarget, hashCode, setIdentifier, setSource, setTarget, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface de.bioforscher.singa.mathematics.graphs.model.Edge

getCopy

Constructor Detail

DynamicProgrammingEdge

public DynamicProgrammingEdge(int identifier)

DynamicProgrammingEdge

public DynamicProgrammingEdge(int identifier,
                              double weight)

DynamicProgrammingEdge

public DynamicProgrammingEdge(int identifier,
                              double weight,
                              AminoAcidFamily first,
                              AminoAcidFamily second)

Method Detail

getFirst

public AminoAcidFamily getFirst()

setFirst

public void setFirst(AminoAcidFamily first)

getSecond

public AminoAcidFamily getSecond()

setSecond

public void setSecond(AminoAcidFamily second)